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The map label for this gene is 158424226

Identifier: 158424226

GI number: 158424226

Start: 2936068

End: 2936868

Strand: Direct

Name: 158424226

Synonym: AZC_2602

Alternate gene names: NA

Gene position: 2936068-2936868 (Clockwise)

Preceding gene: 158424225

Following gene: 158424227

Centisome position: 54.68

GC content: 68.16

Gene sequence:

>801_bases
ATGCAGGACACGCCACTTCATCTGTTCCAGGAAGGCAAGCTGACGGACGCCATCGCCGCCATGAACCAGCAGGTGAAGGA
AAAGCCGCTGGACATCGCGCTGCGCAGCCAGTTGGCGGAGCTTCTGTGTGTGGCGGGCGACCTCGACCGGGCCGAGCGCC
AGTTCGAGGCCATCGCCCAGCAGGACCCGAAGACCGCCCTGCAGGTGGGGAGCCTGCGCCAACTCCTGCGGTCGAGCCAG
GCCCGCCGCCAGGTGTTCCTGGAAGGCCGGGCGCCGGACGTCCTCGAGGAGCCGCCGGCCCATGTGGCGCTGCGCCTCGA
GGCCCTGATGCACCTGCGGGAAGGGCGCGCGGCGGAGGCCGGGGCGAGCCTTGCCAAGGCGGAAGAGCTGCGTCCCCCGC
TCGCCGGCCGCCACAACGACATCGGGTTCGTGGATTTTCGCGATCTCGACGATCTTCTCGGCGGCATCCTCGAAGTGATG
ACCACCACGGGCAAATATTTCTGGGTGCCCATGGAAAGGGTGGAGACACTGGAATTCGAGGCGCCACGCCGGATGCTGGA
CAGTGCCTGGCGCATGGCGCAGATCAGCGTGCGCGGCGGGCCTCAGGGCGAGGTGGCGATCCCCTCCACCTATCCCGCCA
CGGGAGAGGCTCCGTCCGATGCGGTCCGTCTCGGCCGTGAGACCGACTGGACCGAGGTGGCGCCCGACTGCGTCCGCGGC
TCGGGCCTGCGCACCTTCCTCGTGGGCGAGGAGAGCCTTACCATTCTCCAGTTGGGACGACTGGAGTTCGACGTCCAATG
A

Upstream 100 bases:

>100_bases
ATTTCCAGCTCGACCAGATCTTCACCACCTTCAAGCTCGTCACCGACCTCGCCCTTCACGTGCAGCGGCCCGTCAACTGA
CCTTTCCGGGGGAAACCACC

Downstream 100 bases:

>100_bases
GCCCTCCGGCCAGTGTGACGCTGTCTGTTCTGGATCGCCTGCGCGGGGGCGAGGGTCCCCGCGTCGCGCGCATCCGCGAC
GGCATCCGGCAGGACCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: SciE Type Virulence Protein; ImpE-Like Protein; ImpE Family Protein; Avirulence Locus Protein; Virulence-Island/Protein Involved In Nitrogen Fixation; ImpE Protein Superfamily Protein; Secretion Protein; Cytoplasmic Protein SciE; Protein Of Avirulence Locus ImpE

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQDTPLHLFQEGKLTDAIAAMNQQVKEKPLDIALRSQLAELLCVAGDLDRAERQFEAIAQQDPKTALQVGSLRQLLRSSQ
ARRQVFLEGRAPDVLEEPPAHVALRLEALMHLREGRAAEAGASLAKAEELRPPLAGRHNDIGFVDFRDLDDLLGGILEVM
TTTGKYFWVPMERVETLEFEAPRRMLDSAWRMAQISVRGGPQGEVAIPSTYPATGEAPSDAVRLGRETDWTEVAPDCVRG
SGLRTFLVGEESLTILQLGRLEFDVQ

Sequences:

>Translated_266_residues
MQDTPLHLFQEGKLTDAIAAMNQQVKEKPLDIALRSQLAELLCVAGDLDRAERQFEAIAQQDPKTALQVGSLRQLLRSSQ
ARRQVFLEGRAPDVLEEPPAHVALRLEALMHLREGRAAEAGASLAKAEELRPPLAGRHNDIGFVDFRDLDDLLGGILEVM
TTTGKYFWVPMERVETLEFEAPRRMLDSAWRMAQISVRGGPQGEVAIPSTYPATGEAPSDAVRLGRETDWTEVAPDCVRG
SGLRTFLVGEESLTILQLGRLEFDVQ
>Mature_266_residues
MQDTPLHLFQEGKLTDAIAAMNQQVKEKPLDIALRSQLAELLCVAGDLDRAERQFEAIAQQDPKTALQVGSLRQLLRSSQ
ARRQVFLEGRAPDVLEEPPAHVALRLEALMHLREGRAAEAGASLAKAEELRPPLAGRHNDIGFVDFRDLDDLLGGILEVM
TTTGKYFWVPMERVETLEFEAPRRMLDSAWRMAQISVRGGPQGEVAIPSTYPATGEAPSDAVRLGRETDWTEVAPDCVRG
SGLRTFLVGEESLTILQLGRLEFDVQ

Specific function: Unknown

COG id: COG4455

COG function: function code R; Protein of avirulence locus involved in temperature-dependent protein secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29435; Mature: 29435

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDTPLHLFQEGKLTDAIAAMNQQVKEKPLDIALRSQLAELLCVAGDLDRAERQFEAIAQ
CCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QDPKTALQVGSLRQLLRSSQARRQVFLEGRAPDVLEEPPAHVALRLEALMHLREGRAAEA
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHH
GASLAKAEELRPPLAGRHNDIGFVDFRDLDDLLGGILEVMTTTGKYFWVPMERVETLEFE
HHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
APRRMLDSAWRMAQISVRGGPQGEVAIPSTYPATGEAPSDAVRLGRETDWTEVAPDCVRG
HHHHHHHHHHHEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCHHHCCHHHHCC
SGLRTFLVGEESLTILQLGRLEFDVQ
CCCEEEEECCCCEEEEEECCEEECCC
>Mature Secondary Structure
MQDTPLHLFQEGKLTDAIAAMNQQVKEKPLDIALRSQLAELLCVAGDLDRAERQFEAIAQ
CCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QDPKTALQVGSLRQLLRSSQARRQVFLEGRAPDVLEEPPAHVALRLEALMHLREGRAAEA
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCHHHHHHHHHHHHHHCCCCHHH
GASLAKAEELRPPLAGRHNDIGFVDFRDLDDLLGGILEVMTTTGKYFWVPMERVETLEFE
HHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
APRRMLDSAWRMAQISVRGGPQGEVAIPSTYPATGEAPSDAVRLGRETDWTEVAPDCVRG
HHHHHHHHHHHEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHCCCCCCHHHCCHHHHCC
SGLRTFLVGEESLTILQLGRLEFDVQ
CCCEEEEECCCCEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA