| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is hflK [H]
Identifier: 158424193
GI number: 158424193
Start: 2894045
End: 2895175
Strand: Direct
Name: hflK [H]
Synonym: AZC_2569
Alternate gene names: 158424193
Gene position: 2894045-2895175 (Clockwise)
Preceding gene: 158424192
Following gene: 158424194
Centisome position: 53.9
GC content: 68.17
Gene sequence:
>1131_bases ATGTCGTGGAAAAATCAGGGCGGTGGCCCCTGGGGAAATGGGCCGCGGGGGCCCTGGGGTCAGGGACCGAACAATTCCGG ACCGACGCCTCCAGACATTGAAGACATCATCCGCCGCAGTCAGGACCGCCTGCGGCACATGCTCCCGGGCTCCATGGGCA CCAAGGGCGCAATCCTTCTGGTCGCTCTGGTGGTGGCCGGCTGGCTCCTCTCCGGCTTCTACCGCGTCGAGCCCGACGAG CAGGGCGTCGTCCTGCGCTTCGGCCGCTTCGTGCAGCTCACCCAGCCGGGCCTCAACTATCACCTGCCCTACCCGATCGA GACCGTGCTGACCCCCAAGGTCACGCGCGTGAACCGCATCGACATCGGCATGCGCCTCGCCGAGGACACCCGACGCAACG CCACCGTGCTGCGCGACGTTCCCGAGGAGAGCCTGATGCTCACCGGCGACGAGAACATCGTCGACGTGGATTTCGCCGTC TTCTGGGTCATCAACAACGCCGAGCAGTATCTGTTCAACGTGCAGAACCCGGAGAGCACCATCAAGGCGGTGGCCGAGAG CGCCATGCGCGAGGTGGTCGGCCGCAACAACATCCAGCCCATCCTCACCGGCGCCCGGCAGAACATCGAGACCGGCGTGC AGGACCTGATGCAGCGGGTGCTCGACAGCTACAGCGCCGGCGTGAAGATCACGCAGGTCCAGCTCCAGAAGGTGGACCCG CCGGCGCAGGTCATCGACGCCTTCCGCGACGTGCAGGCCGCCCGCGCGGACGCCGAGCGCGCCCAGAACGAGGCGCAGAC CTACGCCAACCGCGTCGTGCCCGAGGCGCGAGGCGAAGCCGCCCGCATCGAAAACGGCGCCCAGGCCTACCGCGAGCGCA CCGTGGTGGAAGCCCGCGGCCAGGCCGAGCGCTTCCTCAAGATCTACGATGAATATGTGAAGGCGAAGGACGTGACGCGC GAGCGCATGTATCTGGAGACCATGGAACGTGTGCTCGGCGGCACCGACAAGGTGATCGTCGACCAGAACGCCAGCCGCAG CGGCGGCGTGGTGCCCGTGCTGCCGCTCAACGAGCCGGCCCGCCGCGCCCCCGCCCCCACCGGCCCGCAGACCCAGGGAG CCGCCCGATGA
Upstream 100 bases:
>100_bases GGCGCGTCCATGGGGCGCGTGTGCCCGGACCGCGAAGCGGTGGCAGAGTGGTACAGGTCTGGACCGCCGCCATCGCGCGG CGCTCCTACGGGAGTCGACG
Downstream 100 bases:
>100_bases AAAACTCTTTCCTCGGCGGCGGCATCCTCGTCGTCTTCCTCATCGTGGTGATCGGCCTCTATTCCTCGGCCTTCACCGTG ACCCAGAACCAGCAGGCGCT
Product: HflK protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSWKNQGGGPWGNGPRGPWGQGPNNSGPTPPDIEDIIRRSQDRLRHMLPGSMGTKGAILLVALVVAGWLLSGFYRVEPDE QGVVLRFGRFVQLTQPGLNYHLPYPIETVLTPKVTRVNRIDIGMRLAEDTRRNATVLRDVPEESLMLTGDENIVDVDFAV FWVINNAEQYLFNVQNPESTIKAVAESAMREVVGRNNIQPILTGARQNIETGVQDLMQRVLDSYSAGVKITQVQLQKVDP PAQVIDAFRDVQAARADAERAQNEAQTYANRVVPEARGEAARIENGAQAYRERTVVEARGQAERFLKIYDEYVKAKDVTR ERMYLETMERVLGGTDKVIVDQNASRSGGVVPVLPLNEPARRAPAPTGPQTQGAAR
Sequences:
>Translated_376_residues MSWKNQGGGPWGNGPRGPWGQGPNNSGPTPPDIEDIIRRSQDRLRHMLPGSMGTKGAILLVALVVAGWLLSGFYRVEPDE QGVVLRFGRFVQLTQPGLNYHLPYPIETVLTPKVTRVNRIDIGMRLAEDTRRNATVLRDVPEESLMLTGDENIVDVDFAV FWVINNAEQYLFNVQNPESTIKAVAESAMREVVGRNNIQPILTGARQNIETGVQDLMQRVLDSYSAGVKITQVQLQKVDP PAQVIDAFRDVQAARADAERAQNEAQTYANRVVPEARGEAARIENGAQAYRERTVVEARGQAERFLKIYDEYVKAKDVTR ERMYLETMERVLGGTDKVIVDQNASRSGGVVPVLPLNEPARRAPAPTGPQTQGAAR >Mature_375_residues SWKNQGGGPWGNGPRGPWGQGPNNSGPTPPDIEDIIRRSQDRLRHMLPGSMGTKGAILLVALVVAGWLLSGFYRVEPDEQ GVVLRFGRFVQLTQPGLNYHLPYPIETVLTPKVTRVNRIDIGMRLAEDTRRNATVLRDVPEESLMLTGDENIVDVDFAVF WVINNAEQYLFNVQNPESTIKAVAESAMREVVGRNNIQPILTGARQNIETGVQDLMQRVLDSYSAGVKITQVQLQKVDPP AQVIDAFRDVQAARADAERAQNEAQTYANRVVPEARGEAARIENGAQAYRERTVVEARGQAERFLKIYDEYVKAKDVTRE RMYLETMERVLGGTDKVIVDQNASRSGGVVPVLPLNEPARRAPAPTGPQTQGAAR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=399, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 41632; Mature: 41501
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKNQGGGPWGNGPRGPWGQGPNNSGPTPPDIEDIIRRSQDRLRHMLPGSMGTKGAILL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH VALVVAGWLLSGFYRVEPDEQGVVLRFGRFVQLTQPGLNYHLPYPIETVLTPKVTRVNRI HHHHHHHHHHHCCEEECCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCCEEEEH DIGMRLAEDTRRNATVLRDVPEESLMLTGDENIVDVDFAVFWVINNAEQYLFNVQNPEST HHHHEHHHHHCCCCHHHHCCCCCCEEEECCCCEEEEEEEEEEEEECCHHHEEECCCHHHH IKAVAESAMREVVGRNNIQPILTGARQNIETGVQDLMQRVLDSYSAGVKITQVQLQKVDP HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC PAQVIDAFRDVQAARADAERAQNEAQTYANRVVPEARGEAARIENGAQAYRERTVVEARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC QAERFLKIYDEYVKAKDVTRERMYLETMERVLGGTDKVIVDQNASRSGGVVPVLPLNEPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCHH RRAPAPTGPQTQGAAR HHCCCCCCCCCCCCCC >Mature Secondary Structure SWKNQGGGPWGNGPRGPWGQGPNNSGPTPPDIEDIIRRSQDRLRHMLPGSMGTKGAILL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH VALVVAGWLLSGFYRVEPDEQGVVLRFGRFVQLTQPGLNYHLPYPIETVLTPKVTRVNRI HHHHHHHHHHHCCEEECCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHCCCCCCEEEEH DIGMRLAEDTRRNATVLRDVPEESLMLTGDENIVDVDFAVFWVINNAEQYLFNVQNPEST HHHHEHHHHHCCCCHHHHCCCCCCEEEECCCCEEEEEEEEEEEEECCHHHEEECCCHHHH IKAVAESAMREVVGRNNIQPILTGARQNIETGVQDLMQRVLDSYSAGVKITQVQLQKVDP HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC PAQVIDAFRDVQAARADAERAQNEAQTYANRVVPEARGEAARIENGAQAYRERTVVEARG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC QAERFLKIYDEYVKAKDVTRERMYLETMERVLGGTDKVIVDQNASRSGGVVPVLPLNEPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCHH RRAPAPTGPQTQGAAR HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]