Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yhbQ [C]

Identifier: 158424187

GI number: 158424187

Start: 2888542

End: 2888838

Strand: Direct

Name: yhbQ [C]

Synonym: AZC_2563

Alternate gene names: 158424187

Gene position: 2888542-2888838 (Clockwise)

Preceding gene: 158424139

Following gene: 158424191

Centisome position: 53.79

GC content: 71.72

Gene sequence:

>297_bases
ATGTCCGATTCTTCCGAGCTGCCCTGCCCCTGGTCCGCCTATCTCGTCGAATGTGGCGACGGCTCGCTTTATTGCGGGGT
GGCGATCGATGTGGAGCGGCGGATGCGCGACCACGCGACGCCCAAGGGCGCCCGCTATGTGCGCGGGCATGGCGGCGTGA
AGCGCCTGCTCTGGTCGCGTCCCTTCGCCTCGCGTGGGGCCGCGCTCAGGGCCGAACTGCGCATCAAGGCCCTGCCCCGC
CGGGCCAAGCTGGACCTCGCCGCCACCGGGGCCATGCCCGGCGGCTGGCCGGAGTGA

Upstream 100 bases:

>100_bases
CGAACGGCTGCCCCTTATAACGCCCCTGCGTGACTGGAACCACGCCGCACCCGATGGCACAAACGGGACGCCATCCGCCC
CGCCTTCAGCCCCTTGCGAC

Downstream 100 bases:

>100_bases
GCGGCGCGCGCCCGCACGCCGCTCCTGATCTCACGCAGCGTTAAGGTCGCGGACGAAGGTCTCCACCACCGACCGCAGGT
CCGTCGCCTGGGCCGAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSRPFASRGAALRAELRIKALPR
RAKLDLAATGAMPGGWPE

Sequences:

>Translated_98_residues
MSDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSRPFASRGAALRAELRIKALPR
RAKLDLAATGAMPGGWPE
>Mature_97_residues
SDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSRPFASRGAALRAELRIKALPRR
AKLDLAATGAMPGGWPE

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=83, Percent_Identity=45.7831325301205, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10695; Mature: 10564

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSR
CCCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCEEEECCCCHHHHHHCC
PFASRGAALRAELRIKALPRRAKLDLAATGAMPGGWPE
CCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SDSSELPCPWSAYLVECGDGSLYCGVAIDVERRMRDHATPKGARYVRGHGGVKRLLWSR
CCCCCCCCCCEEEEEECCCCCEEEEEEEEHHHHHHHCCCCCCCEEEECCCCHHHHHHCC
PFASRGAALRAELRIKALPRRAKLDLAATGAMPGGWPE
CCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]