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The map label for this gene is amaB [H]

Identifier: 158424064

GI number: 158424064

Start: 2775785

End: 2777038

Strand: Reverse

Name: amaB [H]

Synonym: AZC_2440

Alternate gene names: 158424064

Gene position: 2777038-2775785 (Counterclockwise)

Preceding gene: 158424065

Following gene: 158424063

Centisome position: 51.72

GC content: 69.06

Gene sequence:

>1254_bases
ATGGCCTATCCTTTGATCGATGCCGGGCGGGTCTGGAACCGCCTGATGGCGCTGGCCGAGATCGGCGCGCTCTCGCAGGG
CGGCGTCAATCGTCAGGCTTTGACCCTCGGCGAGGCCGAGGCCTGGCGGCTGATCCTCGACTGGGCGCGGCCGCTCGGCT
TCGAGCCCTCCACCGACGCGGCGGGCAATCTGTTCCTCACCTTGCCGGGCGAGGATCGGAGCCTGCCGCCGGTGGTCGCC
GGCAGCCACATCGACACCCAGCCCACCGGCGGCAAGTTCGATGGCGCGGCCGGCGTGCTGACCGCCTTCGAGGCCGCCGA
AACGCTGGCGGCCGCCGGCGTGCCACGCGGGCGCGATCTGGTGGTGGTGGCCTGGATGAATGAGGAAGGCAGCCGCTTCG
CCCCCGGCATGACGGGGTCGGAGGCTTTTTCCGCCACCCGTCCACTGGCCGAGATTCGCGCCCGCACGGATCTTGCCGGC
ATTACCATGGGCGCGGAGCTGGACCGGCTGCATGCCAGCTTCCCTGACGTGCCCCGACGCCCGCTGGGGTTCCCGGTGGG
CGCCTATGTGGAGCTGCATATCGAGCAGGGGCCGGTGCTGGAGGCGCAGGGTAAGGAGATCGGCATCGTCACCGGGATGC
AGGGCAAGCGCACGTTCCGCATCACCATCACCGGCGCCGAGGGCCATGCGGGCACGCTCGCCATGGCGGAGCGGCGCGAT
GCCATCGCCGCCTTCGGCCGCATGGTTGTGGAGCTGAACCGGCAGGTGGGCGCCCATGATGCGCTTATCAAGTTCACCAT
CGGCCGCGTGCAGGTGGAGCCCAACGCGCCCTCGGTCATTCCCGGCAAGGTCACGTTCAGCATCGACATGCGCCATCCCG
ACAATGCCGTGCTGGAGCTGCTGGCCGAGCGCATCCGCACCATCTGCACGGCGGAGGCAGCACCTTGCGCCGTGACGCTC
GATCTGCTGGTCAACGAGCCGTCCAACGATTTCTCGCCGGTTCTCCAGCAGGCCATCGGTGCGGCGGCGGAACGGCACGG
CTATGGCGCCATGCCCATCCTCTCTTATGCCGGGCACGATTCCCGCCACCTCGCCAAGCGCGCGCCGGCGGCGATGATCT
TCATTCCCTGCCGCGATGGCATCAGCCACGCCGAGGCGGAATGGTCCGAGCCCGCGCATGTGGCGGCTGGCGCGCAGGTG
CTCTGCGATGTCCTGGCCGATCTGCTCGCCTCTTCTGAAATGCCGTCTGCCTGA

Upstream 100 bases:

>100_bases
CGCGCAACTGGCGGAGTTCATTGCGCAGGTGGAGGCGGGGCGCTGGCTGCCGCGCGATCCCCGCGCCATTCCCGGCCAGA
TCATGCGGACGAACTGACCA

Downstream 100 bases:

>100_bases
GGAGTTGCGCCCATGACCGCTTCCGCCAAGATCACCACGCCCGTGATGGACATGGCGGATCTGCCGCCGCAGAGCGCGCT
CGCCCCGGCGAGCGAGGCGG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAYPLIDAGRVWNRLMALAEIGALSQGGVNRQALTLGEAEAWRLILDWARPLGFEPSTDAAGNLFLTLPGEDRSLPPVVA
GSHIDTQPTGGKFDGAAGVLTAFEAAETLAAAGVPRGRDLVVVAWMNEEGSRFAPGMTGSEAFSATRPLAEIRARTDLAG
ITMGAELDRLHASFPDVPRRPLGFPVGAYVELHIEQGPVLEAQGKEIGIVTGMQGKRTFRITITGAEGHAGTLAMAERRD
AIAAFGRMVVELNRQVGAHDALIKFTIGRVQVEPNAPSVIPGKVTFSIDMRHPDNAVLELLAERIRTICTAEAAPCAVTL
DLLVNEPSNDFSPVLQQAIGAAAERHGYGAMPILSYAGHDSRHLAKRAPAAMIFIPCRDGISHAEAEWSEPAHVAAGAQV
LCDVLADLLASSEMPSA

Sequences:

>Translated_417_residues
MAYPLIDAGRVWNRLMALAEIGALSQGGVNRQALTLGEAEAWRLILDWARPLGFEPSTDAAGNLFLTLPGEDRSLPPVVA
GSHIDTQPTGGKFDGAAGVLTAFEAAETLAAAGVPRGRDLVVVAWMNEEGSRFAPGMTGSEAFSATRPLAEIRARTDLAG
ITMGAELDRLHASFPDVPRRPLGFPVGAYVELHIEQGPVLEAQGKEIGIVTGMQGKRTFRITITGAEGHAGTLAMAERRD
AIAAFGRMVVELNRQVGAHDALIKFTIGRVQVEPNAPSVIPGKVTFSIDMRHPDNAVLELLAERIRTICTAEAAPCAVTL
DLLVNEPSNDFSPVLQQAIGAAAERHGYGAMPILSYAGHDSRHLAKRAPAAMIFIPCRDGISHAEAEWSEPAHVAAGAQV
LCDVLADLLASSEMPSA
>Mature_416_residues
AYPLIDAGRVWNRLMALAEIGALSQGGVNRQALTLGEAEAWRLILDWARPLGFEPSTDAAGNLFLTLPGEDRSLPPVVAG
SHIDTQPTGGKFDGAAGVLTAFEAAETLAAAGVPRGRDLVVVAWMNEEGSRFAPGMTGSEAFSATRPLAEIRARTDLAGI
TMGAELDRLHASFPDVPRRPLGFPVGAYVELHIEQGPVLEAQGKEIGIVTGMQGKRTFRITITGAEGHAGTLAMAERRDA
IAAFGRMVVELNRQVGAHDALIKFTIGRVQVEPNAPSVIPGKVTFSIDMRHPDNAVLELLAERIRTICTAEAAPCAVTLD
LLVNEPSNDFSPVLQQAIGAAAERHGYGAMPILSYAGHDSRHLAKRAPAAMIFIPCRDGISHAEAEWSEPAHVAAGAQVL
CDVLADLLASSEMPSA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=398, Percent_Identity=34.6733668341709, Blast_Score=198, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44104; Mature: 43973

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYPLIDAGRVWNRLMALAEIGALSQGGVNRQALTLGEAEAWRLILDWARPLGFEPSTDA
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
AGNLFLTLPGEDRSLPPVVAGSHIDTQPTGGKFDGAAGVLTAFEAAETLAAAGVPRGRDL
CCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE
VVVAWMNEEGSRFAPGMTGSEAFSATRPLAEIRARTDLAGITMGAELDRLHASFPDVPRR
EEEEEECCCCCEECCCCCCCHHHHHHCCHHHHHHHCCHHHEEECCHHHHHHCCCCCCCCC
PLGFPVGAYVELHIEQGPVLEAQGKEIGIVTGMQGKRTFRITITGAEGHAGTLAMAERRD
CCCCCCCCEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCEEHHHHHHH
AIAAFGRMVVELNRQVGAHDALIKFTIGRVQVEPNAPSVIPGKVTFSIDMRHPDNAVLEL
HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH
LAERIRTICTAEAAPCAVTLDLLVNEPSNDFSPVLQQAIGAAAERHGYGAMPILSYAGHD
HHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
SRHLAKRAPAAMIFIPCRDGISHAEAEWSEPAHVAAGAQVLCDVLADLLASSEMPSA
HHHHHHHCCEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AYPLIDAGRVWNRLMALAEIGALSQGGVNRQALTLGEAEAWRLILDWARPLGFEPSTDA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCC
AGNLFLTLPGEDRSLPPVVAGSHIDTQPTGGKFDGAAGVLTAFEAAETLAAAGVPRGRDL
CCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE
VVVAWMNEEGSRFAPGMTGSEAFSATRPLAEIRARTDLAGITMGAELDRLHASFPDVPRR
EEEEEECCCCCEECCCCCCCHHHHHHCCHHHHHHHCCHHHEEECCHHHHHHCCCCCCCCC
PLGFPVGAYVELHIEQGPVLEAQGKEIGIVTGMQGKRTFRITITGAEGHAGTLAMAERRD
CCCCCCCCEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCEEHHHHHHH
AIAAFGRMVVELNRQVGAHDALIKFTIGRVQVEPNAPSVIPGKVTFSIDMRHPDNAVLEL
HHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH
LAERIRTICTAEAAPCAVTLDLLVNEPSNDFSPVLQQAIGAAAERHGYGAMPILSYAGHD
HHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
SRHLAKRAPAAMIFIPCRDGISHAEAEWSEPAHVAAGAQVLCDVLADLLASSEMPSA
HHHHHHHCCEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]