| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mutL
Identifier: 158424017
GI number: 158424017
Start: 2720723
End: 2722600
Strand: Reverse
Name: mutL
Synonym: AZC_2393
Alternate gene names: 158424017
Gene position: 2722600-2720723 (Counterclockwise)
Preceding gene: 158424018
Following gene: 158424016
Centisome position: 50.7
GC content: 70.71
Gene sequence:
>1878_bases ATGACCATCCGTCGCCTTCCGCCCGTTCTCATTGATCGCATCGCCGCGGGCGAAGTGGTCGAGCGTCCTGCGGCGGCCGT GAAGGAACTGGTCGAGAATGCGATCGATGCCGGCGCCACGGAGATCGAGGTGCTGGTGGTCGGTGGCGGACGGGAGATGA TCCGCATCTCCGACAATGGCTCCGGCATGAGTGCGGACGAACTGTCCCTCGCCGTCGAGCGTCACGCCACCTCCAAGCTC CCCACCGAAGACCTTCTCGCCATTTCGACGCTGGGCTTCCGGGGTGAGGCGCTGCCCTCAATTGGCGCCGTGGCGCGCCT CTCCATCGCCAGCCGCCCCAAGTCCGCGCCCCATGCCTTCGAGATTCGCGTCGAGGGCGGGGTCGTCACCCCGCCCCGTC CGGCGGCGCTCAATGGCGGCACGCGGGTGGAGGTGCGCGATCTCTTCTTCGCGACGCCCGCGCGCCTGAAATTCCTGAAA TCCGACCGGGCCGAAGCCGCCGCCGCCGCGGACGTGGTGCGCCGCCTCGCGCTGGCCCGGCCCGATGTCGCCTTCACCTT GATGACTGATGACCGCCAGCCCCTCACCTGGGTGGCGAGGTCCATGGATGAGGCCGGTCGCGCAGCCCGTGTCGCCGATG TCCTCGGCGCGGAGGCGGGGCGCAACCTCATTCCGGTGGTGGGCGAGCGGGGCGGGGTGCGGCTGGTGGGGCTCGCGGGA CTGCCCACCTATTCCAAGGCCAATTCGCTCTCCCAATTCCTGTTCGTGAACGGCCGGCCGGTACGGGACAAACTGCTGAT GGGCGCGCTTCGAGCCGCCTATTCCGACCTGCTGCCTTCCGACCGCTATCCGGTGCTCGCCCTCTTCCTCAGCCTCGATC CGCGCGAGGTGGACGTGAACGTTCATCCCGCCAAGACCGAGGTGCGCTTTCGCGACGGGGGGAACGTGCGCGCCCTTCTG GTGCGCACGCTGACCGATGCGCTCGCCGCCCGCGTGCCGAGCACCGCCGGCACCATCGCCGACCGGCTGGTGGAACTCGC CCGCACGCCGGAACTGGAGCCGGCGCGCCCCGCCGCCGCCATCCCGGAGTTCCGGCCCTATCGGGCCGAGCCCATGCCGG CCGGGGGCTACGATTGGCGCGCCTCCCCCGCGCGCCCGCTGAACGTGGCGGAGCCGGACGGGGCGCTCGAGGCCGAGATG GAAAGCTTCGCCGAAGCGGTGCAGGCTTCCTTCGACGTCGGGATGCCCGCCGCGGACGCCCGCGCCGATGCGGCCGTGCC CGAGACGGGCGATCTCGACCGGCCGCTGGGCGCGGCGCGCGCGCAACTGCACGAGACCTACATCGTCGCGCAAACCCGCG AGGGCATGGTGCTGGTGGATCAGCACGCCGCCCATGAGCGCCTCGTCTATGAGAAGCTGAAGGCCGCGCTGGAGCGGGAC GGGGTGGCACGGCAGGGCCTGCTGGTGCCTGCGGTGGTCGATCTCGATCCGGCCGAGGCGGACCGGCTGGCGGAGCGGGC TGGGGATCTGGCGGCGCTCGGGCTCGTCATCGAGCCCTTCGGCATCGGCGCGGTTCTGGTGCGCGAGGTGCCGGCGCTGC TCGCCAAGGCGGACGTGACGAAACTCGTGCGGGACGTGGCTGAGCATTCCGCGGAATGGGATGACGCGCTCCCGCTGGAG CGGCGCCTGCTGCACGTGGCCGCCACCATGGCTTGCCACGGCTCCGTGCGGGCCGGCCGGCGCCTTAGGGTGGAGGAGAT GAACGCCCTCCTGCGGGAGATGGAGGAGACGCCGAACGCCGGCGAGTGCAATCACGGACGGCCGACCTTCATCACTTTGT CCCTGAAGGACGTGGAAAAACTGTTCGCCCGCCGCTGA
Upstream 100 bases:
>100_bases TTTGCGTGGACGACGCAGCAGCCTCCGGGCCCTCGATTAGGGAGGAGGGGCCCGCTGCTCTAGGATCGGGCCGTTCCCAG TCATCGGCCGAATCATCCTC
Downstream 100 bases:
>100_bases GGCCCCGTCGCGCTGCGCTGCGGAACGATCCCGCCGCCCGACCGTTGCAGGAGAGGCGCCCCTTGCCGCGGGGCGCCTCT GCCCGCAGCAAAGAGGGATG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MTIRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNGSGMSADELSLAVERHATSKL PTEDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAFEIRVEGGVVTPPRPAALNGGTRVEVRDLFFATPARLKFLK SDRAEAAAAADVVRRLALARPDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAG LPTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVNVHPAKTEVRFRDGGNVRALL VRTLTDALAARVPSTAGTIADRLVELARTPELEPARPAAAIPEFRPYRAEPMPAGGYDWRASPARPLNVAEPDGALEAEM ESFAEAVQASFDVGMPAADARADAAVPETGDLDRPLGAARAQLHETYIVAQTREGMVLVDQHAAHERLVYEKLKAALERD GVARQGLLVPAVVDLDPAEADRLAERAGDLAALGLVIEPFGIGAVLVREVPALLAKADVTKLVRDVAEHSAEWDDALPLE RRLLHVAATMACHGSVRAGRRLRVEEMNALLREMEETPNAGECNHGRPTFITLSLKDVEKLFARR
Sequences:
>Translated_625_residues MTIRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNGSGMSADELSLAVERHATSKL PTEDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAFEIRVEGGVVTPPRPAALNGGTRVEVRDLFFATPARLKFLK SDRAEAAAAADVVRRLALARPDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAG LPTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVNVHPAKTEVRFRDGGNVRALL VRTLTDALAARVPSTAGTIADRLVELARTPELEPARPAAAIPEFRPYRAEPMPAGGYDWRASPARPLNVAEPDGALEAEM ESFAEAVQASFDVGMPAADARADAAVPETGDLDRPLGAARAQLHETYIVAQTREGMVLVDQHAAHERLVYEKLKAALERD GVARQGLLVPAVVDLDPAEADRLAERAGDLAALGLVIEPFGIGAVLVREVPALLAKADVTKLVRDVAEHSAEWDDALPLE RRLLHVAATMACHGSVRAGRRLRVEEMNALLREMEETPNAGECNHGRPTFITLSLKDVEKLFARR >Mature_624_residues TIRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNGSGMSADELSLAVERHATSKLP TEDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAFEIRVEGGVVTPPRPAALNGGTRVEVRDLFFATPARLKFLKS DRAEAAAAADVVRRLALARPDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAGL PTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVNVHPAKTEVRFRDGGNVRALLV RTLTDALAARVPSTAGTIADRLVELARTPELEPARPAAAIPEFRPYRAEPMPAGGYDWRASPARPLNVAEPDGALEAEME SFAEAVQASFDVGMPAADARADAAVPETGDLDRPLGAARAQLHETYIVAQTREGMVLVDQHAAHERLVYEKLKAALERDG VARQGLLVPAVVDLDPAEADRLAERAGDLAALGLVIEPFGIGAVLVREVPALLAKADVTKLVRDVAEHSAEWDDALPLER RLLHVAATMACHGSVRAGRRLRVEEMNALLREMEETPNAGECNHGRPTFITLSLKDVEKLFARR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=313, Percent_Identity=37.6996805111821, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI4505911, Length=350, Percent_Identity=28, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI189458898, Length=350, Percent_Identity=28, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI4505913, Length=345, Percent_Identity=28.9855072463768, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI310128478, Length=345, Percent_Identity=28.9855072463768, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI189458896, Length=348, Percent_Identity=26.4367816091954, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI263191589, Length=219, Percent_Identity=31.0502283105023, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI310128480, Length=306, Percent_Identity=26.797385620915, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI91992160, Length=332, Percent_Identity=26.5060240963855, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI91992162, Length=332, Percent_Identity=26.5060240963855, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1790612, Length=560, Percent_Identity=34.4642857142857, Blast_Score=251, Evalue=1e-67, Organism=Caenorhabditis elegans, GI71991825, Length=330, Percent_Identity=36.0606060606061, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17562796, Length=341, Percent_Identity=26.6862170087977, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323819, Length=319, Percent_Identity=38.871473354232, Blast_Score=194, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6324247, Length=353, Percent_Identity=27.4787535410765, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=731, Percent_Identity=20.656634746922, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323063, Length=397, Percent_Identity=26.1964735516373, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17136968, Length=314, Percent_Identity=37.8980891719745, Blast_Score=195, Evalue=7e-50, Organism=Drosophila melanogaster, GI17136970, Length=344, Percent_Identity=26.453488372093, Blast_Score=106, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_AZOC5 (A8I6D2)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001525309.1 - ProteinModelPortal: A8I6D2 - SMR: A8I6D2 - GeneID: 5691771 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_2393 - HOGENOM: HBG520262 - OMA: FLFINNR - ProtClustDB: PRK00095 - BioCyc: ACAU438753:AZC_2393-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 67053; Mature: 66921
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCC SGMSADELSLAVERHATSKLPTEDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAF CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE EIRVEGGVVTPPRPAALNGGTRVEVRDLFFATPARLKFLKSDRAEAAAAADVVRRLALAR EEEECCCCCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAG CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEC LPTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVN CCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE VHPAKTEVRFRDGGNVRALLVRTLTDALAARVPSTAGTIADRLVELARTPELEPARPAAA ECCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC IPEFRPYRAEPMPAGGYDWRASPARPLNVAEPDGALEAEMESFAEAVQASFDVGMPAADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC RADAAVPETGDLDRPLGAARAQLHETYIVAQTREGMVLVDQHAAHERLVYEKLKAALERD CCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHC GVARQGLLVPAVVDLDPAEADRLAERAGDLAALGLVIEPFGIGAVLVREVPALLAKADVT CCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH KLVRDVAEHSAEWDDALPLERRLLHVAATMACHGSVRAGRRLRVEEMNALLREMEETPNA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCEECHHHHHHHHHHHHHCCCC GECNHGRPTFITLSLKDVEKLFARR CCCCCCCCEEEEEEHHHHHHHHHCC >Mature Secondary Structure TIRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCC SGMSADELSLAVERHATSKLPTEDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAF CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEE EIRVEGGVVTPPRPAALNGGTRVEVRDLFFATPARLKFLKSDRAEAAAAADVVRRLALAR EEEECCCCCCCCCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAG CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEC LPTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVN CCCCHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEE VHPAKTEVRFRDGGNVRALLVRTLTDALAARVPSTAGTIADRLVELARTPELEPARPAAA ECCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC IPEFRPYRAEPMPAGGYDWRASPARPLNVAEPDGALEAEMESFAEAVQASFDVGMPAADA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC RADAAVPETGDLDRPLGAARAQLHETYIVAQTREGMVLVDQHAAHERLVYEKLKAALERD CCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHC GVARQGLLVPAVVDLDPAEADRLAERAGDLAALGLVIEPFGIGAVLVREVPALLAKADVT CCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH KLVRDVAEHSAEWDDALPLERRLLHVAATMACHGSVRAGRRLRVEEMNALLREMEETPNA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCEECHHHHHHHHHHHHHCCCC GECNHGRPTFITLSLKDVEKLFARR CCCCCCCCEEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA