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The map label for this gene is yfhC [C]

Identifier: 158424013

GI number: 158424013

Start: 2715059

End: 2715502

Strand: Reverse

Name: yfhC [C]

Synonym: AZC_2389

Alternate gene names: 158424013

Gene position: 2715502-2715059 (Counterclockwise)

Preceding gene: 158424016

Following gene: 158424012

Centisome position: 50.57

GC content: 70.05

Gene sequence:

>444_bases
GTGAGCGAGACTTTCATGCAGACGGCCCTTTCCGAGGCCCGCGCCGCCGCCGAGCGGGGCGAGGTGCCGGTCGGGGCCGT
CCTCGTGCGCAACAGCCAGGTCATCGCCCGTGACGGCAACCGTACCCGCGAACTGTCCGATCCCACCGCCCATGCGGAGA
TGCAGGTGCTGCGCGCGGGGGCAAAGGCGCTTGGCGCCGAACGGCTCCTGACCTGCGACCTCTATGTGACGCTGGAGCCC
TGCGCCATGTGCGCCGGGGCCATCTCCTTCGCCCGCATCCGCCGCCTCTATTACGGCGCACTCGATCCCAAGGGCGGGGC
GGTGGACAGCGGGCCGCGCTTTTTCACCCAGCCCACCTGCCATCATGCGCCGGACGTCTATGGCGGCATCGCCGAGCGGC
ATTCGGCGGAGATCCTGCGCAACTTCTTCCAGGCGCGCCGCTAG

Upstream 100 bases:

>100_bases
CGCGGGGAACGCGGTTCTTGTCCTTGCGGGGGGGCGATGTTCGAGGCATGGAGGGGCGATAGCACGAACCGTGCGGCGAG
ACGAGATCGCGGGGCATCCG

Downstream 100 bases:

>100_bases
AGCGGTGAATCGCCCGCTACCTCTGCATCCGGCCCTGGGCGGAGCGGATTGCCACAGGGGGAGGATTTTGCACCTGAGCG
TGACGCATTATGGTGCAGTG

Product: cytidine and deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAKALGAERLLTCDLYVTLEP
CAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHHAPDVYGGIAERHSAEILRNFFQARR

Sequences:

>Translated_147_residues
MSETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAKALGAERLLTCDLYVTLEP
CAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHHAPDVYGGIAERHSAEILRNFFQARR
>Mature_146_residues
SETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAGAKALGAERLLTCDLYVTLEPC
AMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTCHHAPDVYGGIAERHSAEILRNFFQARR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=116, Percent_Identity=36.2068965517241, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI145693172, Length=145, Percent_Identity=44.8275862068966, Blast_Score=118, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17541138, Length=146, Percent_Identity=36.3013698630137, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17554608, Length=114, Percent_Identity=35.9649122807018, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17555996, Length=97, Percent_Identity=41.2371134020619, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355527, Length=149, Percent_Identity=31.5436241610738, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15993; Mature: 15862

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAG
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHH
AKALGAERLLTCDLYVTLEPCAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTC
HHHHCHHHEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
HHAPDVYGGIAERHSAEILRNFFQARR
CCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETFMQTALSEARAAAERGEVPVGAVLVRNSQVIARDGNRTRELSDPTAHAEMQVLRAG
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHH
AKALGAERLLTCDLYVTLEPCAMCAGAISFARIRRLYYGALDPKGGAVDSGPRFFTQPTC
HHHHCHHHEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
HHAPDVYGGIAERHSAEILRNFFQARR
CCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA