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The map label for this gene is merR

Identifier: 158423916

GI number: 158423916

Start: 2617111

End: 2619159

Strand: Reverse

Name: merR

Synonym: AZC_2292

Alternate gene names: NA

Gene position: 2619159-2617111 (Counterclockwise)

Preceding gene: 158423917

Following gene: 158423912

Centisome position: 48.78

GC content: 73.06

Gene sequence:

>2049_bases
GTGGTTGAGGCGAGGCATCCCGACAAAGCCCCGGACGCCTTCCGCACCATCAGCGAGGTGGCAGACGAACTTGAGCTGCC
GCAGCACGTCCTGCGCTTCTGGGAAACCAAGTTCACCCACATCCGCCCCGTCAAACGGGCCGGCGGCCGGCGCTATTACC
GCCGCGAGGATGTGGACCTGCTGCGCGGCATCCGCCGGCTCCTCTACAGCGAAGGCTACACCATCAAGGGTGTGCAGAAG
ATCCTGAAGGAGCAGGGTGTTCGCCACGTGCAGGCCGTTGGCTTCGACGACGGTCCGGCCGAGTTCGGCGCCCCGCCTGC
GCCCCGGCGCAACGAGCCCGATACAGCGCCCATGCACACGGACGAGGGGTCCGGCTTCGGTGGCCTGCTCGGCGGTTTTC
TGCCCCGCCGGAAGAGCCGTGCCGCGGCCGACGAGATGCGGGACGTGCCCGGCCATGACGAGCCGCCGCTGCCCTTTCCC
GACTTCGCCAATTTCACGCCCCGGACGGAAGAACCGGTTCCGCCGCCGCGCCAGCGGGCGCAGCCCCGCGCGCCGGAACC
GCGTCCCAAAGTGGAGCGCAGCGAGCCGGCCTTCGAAGTGCCGCGCGAGCCTCCGGCCCGTGTGCCGGAGCCGCCGCGCG
CGGCCGCCCGGCCACGACAGCCGATGATGGAAGAGGAACCGGAAAGTTACGAGCCGCGCGTCGATCCTGTCTTCGATGCG
CCGCCGCCCCGTCCGGACCCCCGCCCCATGCCGCGCCCGTCGCGCGGGCCCGCCTCGCGCATCCCCGATCGCTCCCATGC
ACCGGAGATGGACGATCCGCTGCTGCCCTTCTTCGATGATCGCGATGCGGAAGATCCGGTCTCCGAGCCGCTGGATGCGC
GCATCCGCCGCCTGAGGGAAGGCTCGCCCCCGGCGGTGCCGTTCGATTCCGGTCCGCCTTCGGAGTTCGCGCCCAAGCGG
GCGCGCCGCCCCGTGGAGCCGCAGCCCGAGCACGAGGATGAGGATATCCTCGACGATTATCACGCCGTGCCGCCGCCCCG
CGCCGCCCGCCCGCCCGAGGCGCGTCCGCATCCGGCCGACATGCACGATCAGTTGCCCTTCGGCGCGCCCGCGCGCGCCG
CGCGACGGGCCGAGCCGCCGCAAGAGCCTCCCATGTCTTTCGATCGCCAGCCGCCCCGTTCCGAACCGGTTCTGCGCCGT
CCGCTGGACGAGCCCCCGGCGCGTCCGGACCCGCGCTATCGGCCCGAGCCGCCTCTTACGGCGCGCGGGCCTGCCTCCCT
GGACGACGAGGACATGGACGAGGGGAACTGGGAACCGGACGACGGGCAGCACGATTTCGAGGAGCGCGGCTGGCAGCGCC
ACGCTCCCCAGCCCGAGCGCTACGAGCCGCCCCCCCGGATGCCGCATCCCTCCGTGGCGACCCAGCCCGCCCGCCGTCAG
GAGCCCGTGCGGCACGACACCTATGAGCCGCGACCGGGGGACCACGCGCCCCGCGACATGCGGGGGAGCGATTGGCAGCA
GGTGGAGGATGACGGCGCCTACGGCCGGTCGGCGCCGCGCGAGCGCCCGCGCGCCCAGCCCGCCCCGTTGCGCGCCCATC
GCGCGGAGCCGCAGGATCCCTTCTTCGATCCGCCGGACATGCCGGCGCCGCCGCTCGGTGGTGCACGCCGGGTCGGGCCT
CTGCTGGGGCCGCTCGAGGAATATGAGCCGGAGGATTTCGTGCCGGATGGCCCTTCGCCAGCGCGTCCCGTGACCGAGCG
CCGGGGGGCTGCCAGCGAACATGTCCGCCCCCATCGGCCGGAGACCTGGGCGGACGAGGACGATGGCTATGCGCCGCCCG
AGCCGAACCGGCCGGGCCCGCCGGAGCAGTATTTGCCGCCGCACCTGCGATCCGAGCCGCGCATGGCCGGCACGCCGCAG
CCGCCGGCGCCTGTTCTGACGCGGGAGGACATCAGCCGCCTTCAGTCGGCGCTGTTCGAGCTGACCGAGTGCCGCCGCAT
CATCGCCGGCCTCGGCGTTCCCCGCGGAGTAGCGGACAGCGAGACCTGA

Upstream 100 bases:

>100_bases
CCGCCGGGTCATGGTTTTCAAGCCGTCCAGCATCTTGAAGAATCGCATCAACGGGCGCACTGGAAAGGCGGCTGGACGCG
AATAAGGAGCCGCGAGGCAC

Downstream 100 bases:

>100_bases
GCTTCGTTCGGGGCGAGAAAAGGGAGAACGCCGGAGCGGGGAACCTGCCTCGCACTCCGGCGTTTCGTGAACATCATCAG
CCCCGCGGCAATCTCGTGCC

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MVEARHPDKAPDAFRTISEVADELELPQHVLRFWETKFTHIRPVKRAGGRRYYRREDVDLLRGIRRLLYSEGYTIKGVQK
ILKEQGVRHVQAVGFDDGPAEFGAPPAPRRNEPDTAPMHTDEGSGFGGLLGGFLPRRKSRAAADEMRDVPGHDEPPLPFP
DFANFTPRTEEPVPPPRQRAQPRAPEPRPKVERSEPAFEVPREPPARVPEPPRAAARPRQPMMEEEPESYEPRVDPVFDA
PPPRPDPRPMPRPSRGPASRIPDRSHAPEMDDPLLPFFDDRDAEDPVSEPLDARIRRLREGSPPAVPFDSGPPSEFAPKR
ARRPVEPQPEHEDEDILDDYHAVPPPRAARPPEARPHPADMHDQLPFGAPARAARRAEPPQEPPMSFDRQPPRSEPVLRR
PLDEPPARPDPRYRPEPPLTARGPASLDDEDMDEGNWEPDDGQHDFEERGWQRHAPQPERYEPPPRMPHPSVATQPARRQ
EPVRHDTYEPRPGDHAPRDMRGSDWQQVEDDGAYGRSAPRERPRAQPAPLRAHRAEPQDPFFDPPDMPAPPLGGARRVGP
LLGPLEEYEPEDFVPDGPSPARPVTERRGAASEHVRPHRPETWADEDDGYAPPEPNRPGPPEQYLPPHLRSEPRMAGTPQ
PPAPVLTREDISRLQSALFELTECRRIIAGLGVPRGVADSET

Sequences:

>Translated_682_residues
MVEARHPDKAPDAFRTISEVADELELPQHVLRFWETKFTHIRPVKRAGGRRYYRREDVDLLRGIRRLLYSEGYTIKGVQK
ILKEQGVRHVQAVGFDDGPAEFGAPPAPRRNEPDTAPMHTDEGSGFGGLLGGFLPRRKSRAAADEMRDVPGHDEPPLPFP
DFANFTPRTEEPVPPPRQRAQPRAPEPRPKVERSEPAFEVPREPPARVPEPPRAAARPRQPMMEEEPESYEPRVDPVFDA
PPPRPDPRPMPRPSRGPASRIPDRSHAPEMDDPLLPFFDDRDAEDPVSEPLDARIRRLREGSPPAVPFDSGPPSEFAPKR
ARRPVEPQPEHEDEDILDDYHAVPPPRAARPPEARPHPADMHDQLPFGAPARAARRAEPPQEPPMSFDRQPPRSEPVLRR
PLDEPPARPDPRYRPEPPLTARGPASLDDEDMDEGNWEPDDGQHDFEERGWQRHAPQPERYEPPPRMPHPSVATQPARRQ
EPVRHDTYEPRPGDHAPRDMRGSDWQQVEDDGAYGRSAPRERPRAQPAPLRAHRAEPQDPFFDPPDMPAPPLGGARRVGP
LLGPLEEYEPEDFVPDGPSPARPVTERRGAASEHVRPHRPETWADEDDGYAPPEPNRPGPPEQYLPPHLRSEPRMAGTPQ
PPAPVLTREDISRLQSALFELTECRRIIAGLGVPRGVADSET
>Mature_682_residues
MVEARHPDKAPDAFRTISEVADELELPQHVLRFWETKFTHIRPVKRAGGRRYYRREDVDLLRGIRRLLYSEGYTIKGVQK
ILKEQGVRHVQAVGFDDGPAEFGAPPAPRRNEPDTAPMHTDEGSGFGGLLGGFLPRRKSRAAADEMRDVPGHDEPPLPFP
DFANFTPRTEEPVPPPRQRAQPRAPEPRPKVERSEPAFEVPREPPARVPEPPRAAARPRQPMMEEEPESYEPRVDPVFDA
PPPRPDPRPMPRPSRGPASRIPDRSHAPEMDDPLLPFFDDRDAEDPVSEPLDARIRRLREGSPPAVPFDSGPPSEFAPKR
ARRPVEPQPEHEDEDILDDYHAVPPPRAARPPEARPHPADMHDQLPFGAPARAARRAEPPQEPPMSFDRQPPRSEPVLRR
PLDEPPARPDPRYRPEPPLTARGPASLDDEDMDEGNWEPDDGQHDFEERGWQRHAPQPERYEPPPRMPHPSVATQPARRQ
EPVRHDTYEPRPGDHAPRDMRGSDWQQVEDDGAYGRSAPRERPRAQPAPLRAHRAEPQDPFFDPPDMPAPPLGGARRVGP
LLGPLEEYEPEDFVPDGPSPARPVTERRGAASEHVRPHRPETWADEDDGYAPPEPNRPGPPEQYLPPHLRSEPRMAGTPQ
PPAPVLTREDISRLQSALFELTECRRIIAGLGVPRGVADSET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 76901; Mature: 76901

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEARHPDKAPDAFRTISEVADELELPQHVLRFWETKFTHIRPVKRAGGRRYYRREDVDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LRGIRRLLYSEGYTIKGVQKILKEQGVRHVQAVGFDDGPAEFGAPPAPRRNEPDTAPMHT
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCC
DEGSGFGGLLGGFLPRRKSRAAADEMRDVPGHDEPPLPFPDFANFTPRTEEPVPPPRQRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
QPRAPEPRPKVERSEPAFEVPREPPARVPEPPRAAARPRQPMMEEEPESYEPRVDPVFDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHCCCCCCCCCCCCCCCC
PPPRPDPRPMPRPSRGPASRIPDRSHAPEMDDPLLPFFDDRDAEDPVSEPLDARIRRLRE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
GSPPAVPFDSGPPSEFAPKRARRPVEPQPEHEDEDILDDYHAVPPPRAARPPEARPHPAD
CCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
MHDQLPFGAPARAARRAEPPQEPPMSFDRQPPRSEPVLRRPLDEPPARPDPRYRPEPPLT
HHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
ARGPASLDDEDMDEGNWEPDDGQHDFEERGWQRHAPQPERYEPPPRMPHPSVATQPARRQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHC
EPVRHDTYEPRPGDHAPRDMRGSDWQQVEDDGAYGRSAPRERPRAQPAPLRAHRAEPQDP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCCCHHHCCCCCCC
FFDPPDMPAPPLGGARRVGPLLGPLEEYEPEDFVPDGPSPARPVTERRGAASEHVRPHRP
CCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCC
ETWADEDDGYAPPEPNRPGPPEQYLPPHLRSEPRMAGTPQPPAPVLTREDISRLQSALFE
CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LTECRRIIAGLGVPRGVADSET
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVEARHPDKAPDAFRTISEVADELELPQHVLRFWETKFTHIRPVKRAGGRRYYRREDVDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LRGIRRLLYSEGYTIKGVQKILKEQGVRHVQAVGFDDGPAEFGAPPAPRRNEPDTAPMHT
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCC
DEGSGFGGLLGGFLPRRKSRAAADEMRDVPGHDEPPLPFPDFANFTPRTEEPVPPPRQRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC
QPRAPEPRPKVERSEPAFEVPREPPARVPEPPRAAARPRQPMMEEEPESYEPRVDPVFDA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHCCCCCCCCCCCCCCCC
PPPRPDPRPMPRPSRGPASRIPDRSHAPEMDDPLLPFFDDRDAEDPVSEPLDARIRRLRE
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
GSPPAVPFDSGPPSEFAPKRARRPVEPQPEHEDEDILDDYHAVPPPRAARPPEARPHPAD
CCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
MHDQLPFGAPARAARRAEPPQEPPMSFDRQPPRSEPVLRRPLDEPPARPDPRYRPEPPLT
HHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
ARGPASLDDEDMDEGNWEPDDGQHDFEERGWQRHAPQPERYEPPPRMPHPSVATQPARRQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHC
EPVRHDTYEPRPGDHAPRDMRGSDWQQVEDDGAYGRSAPRERPRAQPAPLRAHRAEPQDP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCCCHHHCCCCCCC
FFDPPDMPAPPLGGARRVGPLLGPLEEYEPEDFVPDGPSPARPVTERRGAASEHVRPHRP
CCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCC
ETWADEDDGYAPPEPNRPGPPEQYLPPHLRSEPRMAGTPQPPAPVLTREDISRLQSALFE
CCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LTECRRIIAGLGVPRGVADSET
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]