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The map label for this gene is cmpB [H]

Identifier: 158423902

GI number: 158423902

Start: 2603028

End: 2603849

Strand: Direct

Name: cmpB [H]

Synonym: AZC_2278

Alternate gene names: 158423902

Gene position: 2603028-2603849 (Clockwise)

Preceding gene: 158423901

Following gene: 158423904

Centisome position: 48.48

GC content: 69.1

Gene sequence:

>822_bases
GTGAACCCGCGTCCGGAGATCGTCCAACCGTCCGCGCCGGTGGCGAAAGCCGCCGCAGCCAAACGTGGGCGGGTCGGGCG
GGCGCTGCTTGGTCTGGCGGGGCTCGCCCTGTTGCTGGTGCTGTGGTGGCTGGCCTCGGACGTGCTCGCGCGTCCGGGCA
GCTTCGCGCAGAAGTTCTCACCCACCACCGCTCTGCCCGCGCTCTGGCGGCTGCTGCTGCAGTCGGACCTGCCGCTGAAC
ATCCTCGTCAGCCTCAAGCGGGTGCTGGTGGGCCTTGGCATTGCGCTGGCCGTCGGCGTGCCCGTCGGGCTCTTGGTTGG
CAGTTCGCGGCAGGCGGAGGCGGCGACAACGCCGGCCTTCCAGTTCCTGCGGATGATCTCACCCCTGTCCTGGATGCCCA
TCGCCGTGATGGTGTTCGGGGTGGGTGACGCGCCCATCTATTTCCTGCTCGCCTTCGCCACCGTCTGGCCCATCCTGCTG
GCCACGGCGGCGGGCGTGCGGCAGATCGATCCGCAATGGCTGCTGGTGTCCCGCAGCCTTGCGGCCACGGGTTGGGAGAC
GCTGTCACGCGTCATCCTGCCGGCCATACTCGGCCATGTGCTCACCGGCGTGCGGCTGGCCATCGGCATCGCCTGGATCG
TGCTCGTTCCCTGCGAAATGCTCGGCGTTTCGGCCGGGCTCGGCTACTTCATCCTCGATACGCGGGATCGCCTCGCCTAT
CCCGAGCTGATGGCCACCATCCTCGTCATCGGCATCATCGGCTTCGCCCTTGATGCCTGCGCGCGTGCCCTCGTGGAGCG
TCTGGCCCCCGGACGGGGCTGA

Upstream 100 bases:

>100_bases
TGGTGGACGACCGCTTCGTGAAGGCGGCGCTCGCAAGCTCCGGAGGCCTTGCCGCCTTCGGCCTGCCGGAGAGCTTCACA
CGCACCGAGGTCGTCTCGGC

Downstream 100 bases:

>100_bases
GCGGGAGGGGACGGCCGAATGCCGTCCGTCCCTCTCCGCCGGGCCGGACCATCCACGCCTCATCCCTGCATGCTGCGCCA
GCGGTGCGGGGTGGTGCCGG

Product: nitrate/sulfonate/bicarbonate ABC transporter permease

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNPRPEIVQPSAPVAKAAAAKRGRVGRALLGLAGLALLLVLWWLASDVLARPGSFAQKFSPTTALPALWRLLLQSDLPLN
ILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGVGDAPIYFLLAFATVWPILL
ATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSAGLGYFILDTRDRLAY
PELMATILVIGIIGFALDACARALVERLAPGRG

Sequences:

>Translated_273_residues
MNPRPEIVQPSAPVAKAAAAKRGRVGRALLGLAGLALLLVLWWLASDVLARPGSFAQKFSPTTALPALWRLLLQSDLPLN
ILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGVGDAPIYFLLAFATVWPILL
ATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSAGLGYFILDTRDRLAY
PELMATILVIGIIGFALDACARALVERLAPGRG
>Mature_273_residues
MNPRPEIVQPSAPVAKAAAAKRGRVGRALLGLAGLALLLVLWWLASDVLARPGSFAQKFSPTTALPALWRLLLQSDLPLN
ILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAFQFLRMISPLSWMPIAVMVFGVGDAPIYFLLAFATVWPILL
ATAAGVRQIDPQWLLVSRSLAATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSAGLGYFILDTRDRLAY
PELMATILVIGIIGFALDACARALVERLAPGRG

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=251, Percent_Identity=31.0756972111554, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87081802, Length=209, Percent_Identity=31.1004784688995, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28917; Mature: 28917

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRPEIVQPSAPVAKAAAAKRGRVGRALLGLAGLALLLVLWWLASDVLARPGSFAQKFS
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PTTALPALWRLLLQSDLPLNILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
QFLRMISPLSWMPIAVMVFGVGDAPIYFLLAFATVWPILLATAAGVRQIDPQWLLVSRSL
HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSAGLGYFILDTRDRLAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
PELMATILVIGIIGFALDACARALVERLAPGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNPRPEIVQPSAPVAKAAAAKRGRVGRALLGLAGLALLLVLWWLASDVLARPGSFAQKFS
CCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PTTALPALWRLLLQSDLPLNILVSLKRVLVGLGIALAVGVPVGLLVGSSRQAEAATTPAF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
QFLRMISPLSWMPIAVMVFGVGDAPIYFLLAFATVWPILLATAAGVRQIDPQWLLVSRSL
HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AATGWETLSRVILPAILGHVLTGVRLAIGIAWIVLVPCEMLGVSAGLGYFILDTRDRLAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
PELMATILVIGIIGFALDACARALVERLAPGRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA