| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423898
Identifier: 158423898
GI number: 158423898
Start: 2599408
End: 2599980
Strand: Direct
Name: 158423898
Synonym: AZC_2274
Alternate gene names: NA
Gene position: 2599408-2599980 (Clockwise)
Preceding gene: 158423897
Following gene: 158423899
Centisome position: 48.41
GC content: 68.76
Gene sequence:
>573_bases ATGTCCCGACTGCCCCTGCGCACCATTGCCGATGCCCCCGAAGCCGCCCGCCCCTTCCTCGAGACGGCCGAGAAGAACAA CGGCTATCTGCCCAACCTGCTGCGCGTGCTCGCCAACGCGCCGGTGGCGCTTGAAACCTATCTGACGGTCTCCGGCATCA ACGCACGCGCCTCGCTGAACCTCTCCGAGCGCGAGGCGGTCCAGATCACCGCCGCCGCCACCCACGGCTGCGGCTTCTGC GTCGCGGGCCACACCGCCATCGCCGAGAAGAAGGCGCACCTGCCGGCGGAAACCATCACCGCCCTGCGCGGCAAGGCGGA AGTGCCGGATGCCAAGCTCGATGCCGTGGCCCGCTTCACCGAATCCGTGATCGCCCATCGTGGCGCGGTGCCGGAAGCCG ACCTTGCGACGTTCAAGGCGGCCGGCTTCAGCGACCAGCAGGCGCTGGAAGTGGTGCTCGGCGTCAGCCTCGCGACGCTC TGCAACTTTGCCAACAACCTCGGCCAGCCGCCGCTGAACGAACAGCTCGCCGCCTATCGCTGGGAGCCTGCCAAGCCGGT GGCCGCCGAATGA
Upstream 100 bases:
>100_bases GCGGCATAAGGACCGGCGTCGCGCCGCTCACCTCGCCGCGAGCGGGCTTGATCCGCCCATAATTTAATCTATCTGTGCAG TGGAAATGAGGAGACAGACC
Downstream 100 bases:
>100_bases GCGCCCTGCCCGCGCGCCCATTGGCCGATCCGCGCTGCGACGGCTGGCTCACCGAGGCGGCCGACGCGCTCGATACCGGC GCCACGCTCTGCGAGGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Core; Alkylhydroperoxidase Like Protein AhpD Family; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Alkylhydroperoxidase AhpD Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Macrophage Infectivity Potentiator-Related Protein; Peroxidase; Alkylhydroperoxidase-Like Protein AhpD Family; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Macrophage Infectivity Potentiator Protein; Alkylhydroperoxidase-Like Protein; Ypothetical Protein SMU.; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Alkylhydroperoxidase AhpD; Antioxydant Protein; Alkylhydroperoxidase AhpD Family Protein; AhpD Family Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSRLPLRTIADAPEAARPFLETAEKNNGYLPNLLRVLANAPVALETYLTVSGINARASLNLSEREAVQITAAATHGCGFC VAGHTAIAEKKAHLPAETITALRGKAEVPDAKLDAVARFTESVIAHRGAVPEADLATFKAAGFSDQQALEVVLGVSLATL CNFANNLGQPPLNEQLAAYRWEPAKPVAAE
Sequences:
>Translated_190_residues MSRLPLRTIADAPEAARPFLETAEKNNGYLPNLLRVLANAPVALETYLTVSGINARASLNLSEREAVQITAAATHGCGFC VAGHTAIAEKKAHLPAETITALRGKAEVPDAKLDAVARFTESVIAHRGAVPEADLATFKAAGFSDQQALEVVLGVSLATL CNFANNLGQPPLNEQLAAYRWEPAKPVAAE >Mature_189_residues SRLPLRTIADAPEAARPFLETAEKNNGYLPNLLRVLANAPVALETYLTVSGINARASLNLSEREAVQITAAATHGCGFCV AGHTAIAEKKAHLPAETITALRGKAEVPDAKLDAVARFTESVIAHRGAVPEADLATFKAAGFSDQQALEVVLGVSLATLC NFANNLGQPPLNEQLAAYRWEPAKPVAAE
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20036; Mature: 19905
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPLRTIADAPEAARPFLETAEKNNGYLPNLLRVLANAPVALETYLTVSGINARASLN CCCCCCHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEEEEECCCCEEECC LSEREAVQITAAATHGCGFCVAGHTAIAEKKAHLPAETITALRGKAEVPDAKLDAVARFT CCCCCEEEEEEECCCCCCEEECCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHH ESVIAHRGAVPEADLATFKAAGFSDQQALEVVLGVSLATLCNFANNLGQPPLNEQLAAYR HHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC WEPAKPVAAE CCCCCCCCCC >Mature Secondary Structure SRLPLRTIADAPEAARPFLETAEKNNGYLPNLLRVLANAPVALETYLTVSGINARASLN CCCCCHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEEEEECCCCEEECC LSEREAVQITAAATHGCGFCVAGHTAIAEKKAHLPAETITALRGKAEVPDAKLDAVARFT CCCCCEEEEEEECCCCCCEEECCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHH ESVIAHRGAVPEADLATFKAAGFSDQQALEVVLGVSLATLCNFANNLGQPPLNEQLAAYR HHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHC WEPAKPVAAE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA