Click here to switch to the map view.

The map label for this gene is cobP [H]

Identifier: 158423880

GI number: 158423880

Start: 2579698

End: 2580309

Strand: Direct

Name: cobP [H]

Synonym: AZC_2256

Alternate gene names: 158423880

Gene position: 2579698-2580309 (Clockwise)

Preceding gene: 158423878

Following gene: 158423881

Centisome position: 48.04

GC content: 70.26

Gene sequence:

>612_bases
GTGGATTGCGGGCGCGGAGCGCCTGCCATGTCGGGAGACGGTTGTCCGCCTCTCGGCGGTGCCATAAGAGCAGATCGCGC
GCCGGCGCGGGGGAGAGGCATGGCGAGGATCACCCTGGTTCTGGGAGGCGCCCGTTCGGGCAAAAGCCGCCATGCCGAGG
GGCTGGTGGAGGCGCTCCCCGCCCCATGGGCCTATATGGCCACCGCCCAGGCCTTCGATGCCGAGATGGAGGCGCGCATC
GCGCTTCATCGCGACCGCCGGGGCGCGGGCTGGCAGACCTTCGACACGCCGCTCGAGCTGGCCGAGGCCCTTGACGGCCT
GCCCCCAAAGATGCCCGCCCTCGTGGACTGCCTCACCCTCTGGCTCACCAACCATATGCTGGCCGAGCACGATGTGGAGG
CGGAAGCCGCGCGGCTCGTCGCCGCCGTGGCCCGGCGCCCGGCGCCTGTGGTGCTCGTGGCCAATGAGGTGGGGCTCGGC
ATCGTTCCCGACAATGCGCTGGCACGACGGTTCCGCGATGCCGCCGGCCGTCTCAATCAGCAGTTGGCAGACAAGGCCGA
CCGGGTGGTGTTCCTGGTCGCCGGGCTGCCCATGACGGTGAAAGACCAATGA

Upstream 100 bases:

>100_bases
GTTCTCGTGGGCGACGGATGCGACTCCAGCGCAACTCTGCCGCATTGCACACATATACCCCCTTTCGGAGCGGCGCAGCC
CATTTGTCCGGGGCGATGCG

Downstream 100 bases:

>100_bases
TCAACGAACCCATCGATCCGCGCGATGCCGAGCGGCACCGGGCCAAGATGGCCAAGCGCAAGGCCGTGCAGGATGCCGAG
GTGGCGTCCAAGAATATCGA

Product: cobinamide kinase

Products: NA

Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDCGRGAPAMSGDGCPPLGGAIRADRAPARGRGMARITLVLGGARSGKSRHAEGLVEALPAPWAYMATAQAFDAEMEARI
ALHRDRRGAGWQTFDTPLELAEALDGLPPKMPALVDCLTLWLTNHMLAEHDVEAEAARLVAAVARRPAPVVLVANEVGLG
IVPDNALARRFRDAAGRLNQQLADKADRVVFLVAGLPMTVKDQ

Sequences:

>Translated_203_residues
MDCGRGAPAMSGDGCPPLGGAIRADRAPARGRGMARITLVLGGARSGKSRHAEGLVEALPAPWAYMATAQAFDAEMEARI
ALHRDRRGAGWQTFDTPLELAEALDGLPPKMPALVDCLTLWLTNHMLAEHDVEAEAARLVAAVARRPAPVVLVANEVGLG
IVPDNALARRFRDAAGRLNQQLADKADRVVFLVAGLPMTVKDQ
>Mature_203_residues
MDCGRGAPAMSGDGCPPLGGAIRADRAPARGRGMARITLVLGGARSGKSRHAEGLVEALPAPWAYMATAQAFDAEMEARI
ALHRDRRGAGWQTFDTPLELAEALDGLPPKMPALVDCLTLWLTNHMLAEHDVEAEAARLVAAVARRPAPVVLVANEVGLG
IVPDNALARRFRDAAGRLNQQLADKADRVVFLVAGLPMTVKDQ

Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]

COG id: COG2087

COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788302, Length=181, Percent_Identity=43.0939226519337, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003203 [H]

Pfam domain/function: PF02283 CobU [H]

EC number: =2.7.1.156; =2.7.7.62 [H]

Molecular weight: Translated: 21528; Mature: 21528

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCGRGAPAMSGDGCPPLGGAIRADRAPARGRGMARITLVLGGARSGKSRHAEGLVEALP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCC
APWAYMATAQAFDAEMEARIALHRDRRGAGWQTFDTPLELAEALDGLPPKMPALVDCLTL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
WLTNHMLAEHDVEAEAARLVAAVARRPAPVVLVANEVGLGIVPDNALARRFRDAAGRLNQ
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHH
QLADKADRVVFLVAGLPMTVKDQ
HHHHHHCCEEEEEECCCEEECCC
>Mature Secondary Structure
MDCGRGAPAMSGDGCPPLGGAIRADRAPARGRGMARITLVLGGARSGKSRHAEGLVEALP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCC
APWAYMATAQAFDAEMEARIALHRDRRGAGWQTFDTPLELAEALDGLPPKMPALVDCLTL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
WLTNHMLAEHDVEAEAARLVAAVARRPAPVVLVANEVGLGIVPDNALARRFRDAAGRLNQ
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCHHHHHHHHHHHHHHHH
QLADKADRVVFLVAGLPMTVKDQ
HHHHHHCCEEEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1655697; 1655696 [H]