| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158423653
GI number: 158423653
Start: 2340068
End: 2341684
Strand: Reverse
Name: gsiB [H]
Synonym: AZC_2029
Alternate gene names: 158423653
Gene position: 2341684-2340068 (Counterclockwise)
Preceding gene: 158423654
Following gene: 158423652
Centisome position: 43.61
GC content: 63.76
Gene sequence:
>1617_bases GTGACCGACAAGACCGTTTCCAACTGGACCCGTGCCGACGACGCCATGGTTGAGAGCGCCATCCGCCGGGGCGCTTCGCG CCGCGATCTCATGCGCATGCTGCTGGCCGGCGGCATCGCCTCCACCGCTTTCGGCTCTGGCCTCATTGCCCGTGCCACGG ATGCCGTGGCGCAGACGCCGGTCTCCGGCGGCAATCTGAAGGCTGCCGGCTGGTCCGCCTCCACGGCCGACACGCTCGAT CCGGCGAAAGCCTCGCTGTCGACCGACTATGTGCGCTGCTGCGCCTTCTACAACCGCCTGACCTTCATCGACAAAGGCGG CGCCGTGCGCATGGAACTGGCCGAGAGCGTCGAGAGCGGCGACGCCAAGGTCTGGACCGTCAAGCTGCGCAAGGGCGTCA CGTTCCACGACGGCAAGACGCTGACCTCGGCCGACGTGGTCTATTCACTGAAGCGTCACCTCGATCCGGCGGTCGGCTCG AAGGTGAACTCCATCGCCAAGCAGATGAGCGAGATCAAGGCCGTGGACCCGTCCACGGTGGAGATCACTCTCGCCAATCC AAATGGCGACCTGCCCACCATCCTCGGCATGCATCATTTCATGATCATTGCCGAAGGCACCACCACCTTCGCCAAGGCCA ACGGCACCGGAGCCTTCGTCTGCGAGACCTTCGAGCCCGGCGTGCGCTCCATCGGACTGAAGAACAAGAACTACTGGAAG AGCGGCTATCCGCACCTCGATTCCTTCGAGTTCTTTGCCATTTCGGACGATGCGGCGCGCGTGAATGCGCTGCTGTCCGG CGACATCCAGCTCGCCGCCGCGATCAATCCGCGCTCCATGCGCCTGGTGGAAAGCCAGCCCGGCGTGCTGCTGTCGCGCA CCACCTCCGGCAACTACACCGACCTCAACATGCGCCTCGACATGTCGCCCGGCGACAAGAAGGACTTCGTGGAGGGCGTG AAATATCTGCTCAATCGCGAGCAGATCCAGAAGTCCGCCCTGCGGGGCCTGGCGGAGATCGCCAACGACCAGCCGATCCC CCCCTCCAACATGTATTACAATGCCGAACTGAAACCGAAGCCCTTCGATCCGCAGAAGGCGAAGGCGCTGTTCCAGAAGG CCGGCGTGCTCGGCCAGCCCATTCCCGTGGTGACGTCCGAAGCGGCGAACTCGGCCATCGACATGGCCATGGTGCTGCAG CAGGCCGGCCAGGGCATCGGCATGAACTTCGACATCAAGCGCGTGCCGTCGGACGGCTACTGGTCCAACTACTGGCTGAA GGCGCCCATGCACTTCGGCAACATCAATCCGCGCCCCACGCCCGACATCCTCTTCTCGCTGCTCTATGCCTCAAGCGCCC CGTGGAACGAGAGCCAGTACAAGTCGGAGAAGTTCGACCGGCTGCTGCTTGAGGCACGCGGCTCGCTCGATCAGGCCAGG CGCAAGCAGATCTATGGCGAAATGCAGGTGATGATTGCGGAGGAGGCGGGCACGGCCATCCCGGTCTTCATCTCCAATGT GGACGCCCATTCCTCCAAGCTGAAGGGCCTCGAGCCCAATCCGCTGGGTGGCATGATGGGCTACGCCTTCGCCGAGTACG TCTGGCTCGCATCCTGA
Upstream 100 bases:
>100_bases CGCGGCACGCAGCGTAACGGGTGCGTTCGAGAAGACGGCCGGGGAGCTGACCTTCCCTCCCCGCCGGGCCTGTCAACGAG AGACAAAAAAGGGGATCCTC
Downstream 100 bases:
>100_bases CCGCAAAGCCGGCAGGCCGCTTCAGGCCTCGCCGGGGCCGCCCGGTGATCCGTCATCCTCGCGCGGGAGCGCCAATGAAC AGCTATGTCCTGTCCCTTCT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTDKTVSNWTRADDAMVESAIRRGASRRDLMRMLLAGGIASTAFGSGLIARATDAVAQTPVSGGNLKAAGWSASTADTLD PAKASLSTDYVRCCAFYNRLTFIDKGGAVRMELAESVESGDAKVWTVKLRKGVTFHDGKTLTSADVVYSLKRHLDPAVGS KVNSIAKQMSEIKAVDPSTVEITLANPNGDLPTILGMHHFMIIAEGTTTFAKANGTGAFVCETFEPGVRSIGLKNKNYWK SGYPHLDSFEFFAISDDAARVNALLSGDIQLAAAINPRSMRLVESQPGVLLSRTTSGNYTDLNMRLDMSPGDKKDFVEGV KYLLNREQIQKSALRGLAEIANDQPIPPSNMYYNAELKPKPFDPQKAKALFQKAGVLGQPIPVVTSEAANSAIDMAMVLQ QAGQGIGMNFDIKRVPSDGYWSNYWLKAPMHFGNINPRPTPDILFSLLYASSAPWNESQYKSEKFDRLLLEARGSLDQAR RKQIYGEMQVMIAEEAGTAIPVFISNVDAHSSKLKGLEPNPLGGMMGYAFAEYVWLAS
Sequences:
>Translated_538_residues MTDKTVSNWTRADDAMVESAIRRGASRRDLMRMLLAGGIASTAFGSGLIARATDAVAQTPVSGGNLKAAGWSASTADTLD PAKASLSTDYVRCCAFYNRLTFIDKGGAVRMELAESVESGDAKVWTVKLRKGVTFHDGKTLTSADVVYSLKRHLDPAVGS KVNSIAKQMSEIKAVDPSTVEITLANPNGDLPTILGMHHFMIIAEGTTTFAKANGTGAFVCETFEPGVRSIGLKNKNYWK SGYPHLDSFEFFAISDDAARVNALLSGDIQLAAAINPRSMRLVESQPGVLLSRTTSGNYTDLNMRLDMSPGDKKDFVEGV KYLLNREQIQKSALRGLAEIANDQPIPPSNMYYNAELKPKPFDPQKAKALFQKAGVLGQPIPVVTSEAANSAIDMAMVLQ QAGQGIGMNFDIKRVPSDGYWSNYWLKAPMHFGNINPRPTPDILFSLLYASSAPWNESQYKSEKFDRLLLEARGSLDQAR RKQIYGEMQVMIAEEAGTAIPVFISNVDAHSSKLKGLEPNPLGGMMGYAFAEYVWLAS >Mature_537_residues TDKTVSNWTRADDAMVESAIRRGASRRDLMRMLLAGGIASTAFGSGLIARATDAVAQTPVSGGNLKAAGWSASTADTLDP AKASLSTDYVRCCAFYNRLTFIDKGGAVRMELAESVESGDAKVWTVKLRKGVTFHDGKTLTSADVVYSLKRHLDPAVGSK VNSIAKQMSEIKAVDPSTVEITLANPNGDLPTILGMHHFMIIAEGTTTFAKANGTGAFVCETFEPGVRSIGLKNKNYWKS GYPHLDSFEFFAISDDAARVNALLSGDIQLAAAINPRSMRLVESQPGVLLSRTTSGNYTDLNMRLDMSPGDKKDFVEGVK YLLNREQIQKSALRGLAEIANDQPIPPSNMYYNAELKPKPFDPQKAKALFQKAGVLGQPIPVVTSEAANSAIDMAMVLQQ AGQGIGMNFDIKRVPSDGYWSNYWLKAPMHFGNINPRPTPDILFSLLYASSAPWNESQYKSEKFDRLLLEARGSLDQARR KQIYGEMQVMIAEEAGTAIPVFISNVDAHSSKLKGLEPNPLGGMMGYAFAEYVWLAS
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=530, Percent_Identity=26.9811320754717, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1789966, Length=525, Percent_Identity=25.1428571428571, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789887, Length=434, Percent_Identity=24.6543778801843, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1787762, Length=485, Percent_Identity=23.9175257731959, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787495, Length=545, Percent_Identity=21.8348623853211, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789397, Length=536, Percent_Identity=23.8805970149254, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787551, Length=535, Percent_Identity=22.2429906542056, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58477; Mature: 58346
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKTVSNWTRADDAMVESAIRRGASRRDLMRMLLAGGIASTAFGSGLIARATDAVAQTP CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCC VSGGNLKAAGWSASTADTLDPAKASLSTDYVRCCAFYNRLTFIDKGGAVRMELAESVESG CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHCCC DAKVWTVKLRKGVTFHDGKTLTSADVVYSLKRHLDPAVGSKVNSIAKQMSEIKAVDPSTV CCEEEEEEEECCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEE EITLANPNGDLPTILGMHHFMIIAEGTTTFAKANGTGAFVCETFEPGVRSIGLKNKNYWK EEEEECCCCCCCHHHCCEEEEEEECCCCEEEECCCCEEEEEECCCCCHHHCCCCCCCCCC SGYPHLDSFEFFAISDDAARVNALLSGDIQLAAAINPRSMRLVESQPGVLLSRTTSGNYT CCCCCCCCEEEEEECCCHHHHHHEEECCEEEEEEECCCCEEEEECCCCEEEEECCCCCEE DLNMRLDMSPGDKKDFVEGVKYLLNREQIQKSALRGLAEIANDQPIPPSNMYYNAELKPK EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC PFDPQKAKALFQKAGVLGQPIPVVTSEAANSAIDMAMVLQQAGQGIGMNFDIKRVPSDGY CCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC WSNYWLKAPMHFGNINPRPTPDILFSLLYASSAPWNESQYKSEKFDRLLLEARGSLDQAR CCCEEEECCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RKQIYGEMQVMIAEEAGTAIPVFISNVDAHSSKLKGLEPNPLGGMMGYAFAEYVWLAS HHHHHCCEEEEEECCCCCEEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHEECC >Mature Secondary Structure TDKTVSNWTRADDAMVESAIRRGASRRDLMRMLLAGGIASTAFGSGLIARATDAVAQTP CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCC VSGGNLKAAGWSASTADTLDPAKASLSTDYVRCCAFYNRLTFIDKGGAVRMELAESVESG CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHCCC DAKVWTVKLRKGVTFHDGKTLTSADVVYSLKRHLDPAVGSKVNSIAKQMSEIKAVDPSTV CCEEEEEEEECCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEE EITLANPNGDLPTILGMHHFMIIAEGTTTFAKANGTGAFVCETFEPGVRSIGLKNKNYWK EEEEECCCCCCCHHHCCEEEEEEECCCCEEEECCCCEEEEEECCCCCHHHCCCCCCCCCC SGYPHLDSFEFFAISDDAARVNALLSGDIQLAAAINPRSMRLVESQPGVLLSRTTSGNYT CCCCCCCCEEEEEECCCHHHHHHEEECCEEEEEEECCCCEEEEECCCCEEEEECCCCCEE DLNMRLDMSPGDKKDFVEGVKYLLNREQIQKSALRGLAEIANDQPIPPSNMYYNAELKPK EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC PFDPQKAKALFQKAGVLGQPIPVVTSEAANSAIDMAMVLQQAGQGIGMNFDIKRVPSDGY CCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC WSNYWLKAPMHFGNINPRPTPDILFSLLYASSAPWNESQYKSEKFDRLLLEARGSLDQAR CCCEEEECCEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RKQIYGEMQVMIAEEAGTAIPVFISNVDAHSSKLKGLEPNPLGGMMGYAFAEYVWLAS HHHHHCCEEEEEECCCCCEEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA