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The map label for this gene is yliB [C]

Identifier: 158423639

GI number: 158423639

Start: 2323473

End: 2325074

Strand: Reverse

Name: yliB [C]

Synonym: AZC_2015

Alternate gene names: 158423639

Gene position: 2325074-2323473 (Counterclockwise)

Preceding gene: 158423640

Following gene: 158423638

Centisome position: 43.3

GC content: 65.48

Gene sequence:

>1602_bases
ATGGACCGCAGGACATTCTTGAAGGGCGCCGCCGGTGCCGGTTCGCTGGCGATGAGCGGCGGGTTCGCAATGCCCGCGCT
CGCCCAGGGCGCCGCCAAGACGCTGCGCTTCGTGCCGCAGGCGAACCTTGCCAATTTCGACCCCATCTGGGGCACGCAAT
ATGTGGTGCGCAACGCCTCCGTGCTGGTGTGGGACACGCTTTACGGCCTTGATGCCAACCAGAAGCCCCAACGCCAGATG
GTGGAGAGCGAGGAAGTCTCCGCCGACGGCCTGACCTGGACCTTCAAGCTGCGCCCCGGCCTGAAATTCCATGACGGGGA
GAAGGTGCTGGCCAAGGACGTGGTGGCGAGCCTCACCCGCTGGTCCGCGCGCGACCCCATGGGCATCATGCTCAAGAACA
TCCAGAAGGAACTGGTGGCGGTCGACGACAACACCTTCCGCTGGGTGCTTTCCAAGCCCTATCCGAAGATGCTGCTGGCG
CTGGGCAAGACCAACGCCCCCATCGCCTTCATCATGCCGGAGCGGATCGCGCAGACCGATCCCTTCAAGCAGATCACGGA
ATATGTGGGCTCCGGGCCCACCAAGTTCCTGAAGAACGAATGGGTGCCGGGCGCCAAGGCGGTGTTCGAGCGCTTCGCCG
ATTATGTGCCGCGCAATGAGCCCGCCTCGTGGATTTCCGGCGGCAAGAAGATGCTGGTGGACCGCATCGAGTGGGTGGTG
ATGCCCGACCCGGCGACCGCCGCCGCTGCCCTTCAGAACGGCGAGGTGGACTGGTGGGAGCAGCCGCTCTCCGACCTCGT
CCCGCTTCTCAAGAAGAACAAGAACCTCAACGTCGACATCGGCGACCCGCTGGGCAATGTCGGCTCGTTCCGCATGAACC
ACATCCAGCCGCCCTTCGACAATCCGAAGGTGCGCCGCGCCGTGCTCATGGCCTTGAGCCAGGAAGACTACATGCGCGCG
GTCGTTGGCGACGATGAGGCGCTGTGGAAGACCCTGCCCGGCTTCTTCACCCCCGGCACGCCCCTCTACACGGAGGAAGG
CGGCGAGATCCTGAAGGGCAAGCGCGACCTCGACGCCGCCAAGAAGCTGCTGGCCGAGAGCGGCTACAAGGGCGAGCCGG
TGGTGTGCGTGGTGGCGCAGGACCAGCCCATCACCAAGGCGCAGGGCGACGTGACAGTCGATCTTCTGAAGAAGCTCGGC
ATGAATGTGGACTTCGTCGCCACCGACTGGGGCACGGTCGGCTCCCGCCGCGCGCTCAAGACCCCGCCGACGCAGGGCGG
CTGGAGCATGTTCCACACCTGGCATGCGGGCTCGGACTGCGTGAACCCCGCCGCCTATCCCGCCATCCGCGCCAATGGCG
ACAAGGCGTGGTTCGGCTGGCCGGAAAGCCCGGCGGTGGAAGCCGAGGTGGTGTCGTGGTTCGACGCCAAGGACCTCAAT
GAGGAGAAGGCCGCCATTGGCCGCCTCAACAAGGCCGCGCTGGAGAACGTGACCTATGCGCCCACCGGCTTCTTCCTCAC
CTATACGGCGTGGAACAAGAAGGTGACGGGCGTGACCAAGGGCCCGATCCCGACCTTCTGGGGCGTCGCAAAGTCCGCCT
GA

Upstream 100 bases:

>100_bases
GTAGCGCCATCCCGACTTTGTCTCCGCCGGCCGTCACCTTCCAGCGCCGCCGGCGGCATCACCAGAACTACTGAAACAAC
AGGCAACCGAGGGGAATGAC

Downstream 100 bases:

>100_bases
CGGGTAAGGGAACGCATGCTCGGTTACATCCTGCGGCGCACGCTCTCGACCATCCCCGTCATGGCGATGGTCGGGCTGTT
CGTGTTCAGCCTGCTCTACA

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MDRRTFLKGAAGAGSLAMSGGFAMPALAQGAAKTLRFVPQANLANFDPIWGTQYVVRNASVLVWDTLYGLDANQKPQRQM
VESEEVSADGLTWTFKLRPGLKFHDGEKVLAKDVVASLTRWSARDPMGIMLKNIQKELVAVDDNTFRWVLSKPYPKMLLA
LGKTNAPIAFIMPERIAQTDPFKQITEYVGSGPTKFLKNEWVPGAKAVFERFADYVPRNEPASWISGGKKMLVDRIEWVV
MPDPATAAAALQNGEVDWWEQPLSDLVPLLKKNKNLNVDIGDPLGNVGSFRMNHIQPPFDNPKVRRAVLMALSQEDYMRA
VVGDDEALWKTLPGFFTPGTPLYTEEGGEILKGKRDLDAAKKLLAESGYKGEPVVCVVAQDQPITKAQGDVTVDLLKKLG
MNVDFVATDWGTVGSRRALKTPPTQGGWSMFHTWHAGSDCVNPAAYPAIRANGDKAWFGWPESPAVEAEVVSWFDAKDLN
EEKAAIGRLNKAALENVTYAPTGFFLTYTAWNKKVTGVTKGPIPTFWGVAKSA

Sequences:

>Translated_533_residues
MDRRTFLKGAAGAGSLAMSGGFAMPALAQGAAKTLRFVPQANLANFDPIWGTQYVVRNASVLVWDTLYGLDANQKPQRQM
VESEEVSADGLTWTFKLRPGLKFHDGEKVLAKDVVASLTRWSARDPMGIMLKNIQKELVAVDDNTFRWVLSKPYPKMLLA
LGKTNAPIAFIMPERIAQTDPFKQITEYVGSGPTKFLKNEWVPGAKAVFERFADYVPRNEPASWISGGKKMLVDRIEWVV
MPDPATAAAALQNGEVDWWEQPLSDLVPLLKKNKNLNVDIGDPLGNVGSFRMNHIQPPFDNPKVRRAVLMALSQEDYMRA
VVGDDEALWKTLPGFFTPGTPLYTEEGGEILKGKRDLDAAKKLLAESGYKGEPVVCVVAQDQPITKAQGDVTVDLLKKLG
MNVDFVATDWGTVGSRRALKTPPTQGGWSMFHTWHAGSDCVNPAAYPAIRANGDKAWFGWPESPAVEAEVVSWFDAKDLN
EEKAAIGRLNKAALENVTYAPTGFFLTYTAWNKKVTGVTKGPIPTFWGVAKSA
>Mature_533_residues
MDRRTFLKGAAGAGSLAMSGGFAMPALAQGAAKTLRFVPQANLANFDPIWGTQYVVRNASVLVWDTLYGLDANQKPQRQM
VESEEVSADGLTWTFKLRPGLKFHDGEKVLAKDVVASLTRWSARDPMGIMLKNIQKELVAVDDNTFRWVLSKPYPKMLLA
LGKTNAPIAFIMPERIAQTDPFKQITEYVGSGPTKFLKNEWVPGAKAVFERFADYVPRNEPASWISGGKKMLVDRIEWVV
MPDPATAAAALQNGEVDWWEQPLSDLVPLLKKNKNLNVDIGDPLGNVGSFRMNHIQPPFDNPKVRRAVLMALSQEDYMRA
VVGDDEALWKTLPGFFTPGTPLYTEEGGEILKGKRDLDAAKKLLAESGYKGEPVVCVVAQDQPITKAQGDVTVDLLKKLG
MNVDFVATDWGTVGSRRALKTPPTQGGWSMFHTWHAGSDCVNPAAYPAIRANGDKAWFGWPESPAVEAEVVSWFDAKDLN
EEKAAIGRLNKAALENVTYAPTGFFLTYTAWNKKVTGVTKGPIPTFWGVAKSA

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=437, Percent_Identity=28.1464530892449, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1789966, Length=325, Percent_Identity=27.3846153846154, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787495, Length=448, Percent_Identity=25.2232142857143, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1789887, Length=467, Percent_Identity=22.0556745182013, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58604; Mature: 58604

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRTFLKGAAGAGSLAMSGGFAMPALAQGAAKTLRFVPQANLANFDPIWGTQYVVRNAS
CCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC
VLVWDTLYGLDANQKPQRQMVESEEVSADGLTWTFKLRPGLKFHDGEKVLAKDVVASLTR
EEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHH
WSARDPMGIMLKNIQKELVAVDDNTFRWVLSKPYPKMLLALGKTNAPIAFIMPERIAQTD
CCCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHCCCCCCEEEECCHHHCCCC
PFKQITEYVGSGPTKFLKNEWVPGAKAVFERFADYVPRNEPASWISGGKKMLVDRIEWVV
CHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHHEEHEEEEE
MPDPATAAAALQNGEVDWWEQPLSDLVPLLKKNKNLNVDIGDPLGNVGSFRMNHIQPPFD
ECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCCCCCCC
NPKVRRAVLMALSQEDYMRAVVGDDEALWKTLPGFFTPGTPLYTEEGGEILKGKRDLDAA
CHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCHHHCCCCHHHHH
KKLLAESGYKGEPVVCVVAQDQPITKAQGDVTVDLLKKLGMNVDFVATDWGTVGSRRALK
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCC
TPPTQGGWSMFHTWHAGSDCVNPAAYPAIRANGDKAWFGWPESPAVEAEVVSWFDAKDLN
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHCCCCCC
EEKAAIGRLNKAALENVTYAPTGFFLTYTAWNKKVTGVTKGPIPTFWGVAKSA
HHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCEECCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MDRRTFLKGAAGAGSLAMSGGFAMPALAQGAAKTLRFVPQANLANFDPIWGTQYVVRNAS
CCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC
VLVWDTLYGLDANQKPQRQMVESEEVSADGLTWTFKLRPGLKFHDGEKVLAKDVVASLTR
EEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHH
WSARDPMGIMLKNIQKELVAVDDNTFRWVLSKPYPKMLLALGKTNAPIAFIMPERIAQTD
CCCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHCCCCCCEEEECCHHHCCCC
PFKQITEYVGSGPTKFLKNEWVPGAKAVFERFADYVPRNEPASWISGGKKMLVDRIEWVV
CHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHHHEEHEEEEE
MPDPATAAAALQNGEVDWWEQPLSDLVPLLKKNKNLNVDIGDPLGNVGSFRMNHIQPPFD
ECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEECCCCCCCCC
NPKVRRAVLMALSQEDYMRAVVGDDEALWKTLPGFFTPGTPLYTEEGGEILKGKRDLDAA
CHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCHHHCCCCHHHHH
KKLLAESGYKGEPVVCVVAQDQPITKAQGDVTVDLLKKLGMNVDFVATDWGTVGSRRALK
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCC
TPPTQGGWSMFHTWHAGSDCVNPAAYPAIRANGDKAWFGWPESPAVEAEVVSWFDAKDLN
CCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCHHHHHHHCCCCCC
EEKAAIGRLNKAALENVTYAPTGFFLTYTAWNKKVTGVTKGPIPTFWGVAKSA
HHHHHHHHHHHHHHHCCEECCCCEEEEEEECCCEECCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]