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The map label for this gene is yliD [C]

Identifier: 158423637

GI number: 158423637

Start: 2321593

End: 2322519

Strand: Reverse

Name: yliD [C]

Synonym: AZC_2013

Alternate gene names: 158423637

Gene position: 2322519-2321593 (Counterclockwise)

Preceding gene: 158423638

Following gene: 158423636

Centisome position: 43.25

GC content: 68.28

Gene sequence:

>927_bases
TTGAGCCTCGCCAATGATCATCCGGGCGCGGCCCCGCCGGAAGGCCTCGCCATCGCCACCGAACTGCCGGACATCCTCAA
GGCGCGCAAGCCGCGCACGGGGTTCATCGGCTTCCTGCGCCGCCACCCCACCATCGCCATCGGCGGCGCGCTGCTGCTGG
TGCTCATCTTCATCGCCGTCTTCGCGCCCTATCTCGGCACGGTGGACCCGAGCGCGCTCTCCCCGGCCCGCCGCACCCGC
GCGCCGTCCGCTCAATACTGGTTCGGCACGGACATGCTGGGGCGCGACATCTATTCGCGCGTGCTCTACGGCACCCGCGT
CTCGCTGATCGTCGGCTTTGCGGTGGCCTTCTTCGCCTCGCTCGGGGGGCTCGCCATCGGCCTCATCGCCGGCTATGTGC
GCTGGCTGGACAGCCTTGTGATGCGGGTGATGGACAGCCTCATGTCCATTCCGCCCATCCTGCTCGCCGTCTCGCTCATG
GCCATCACGCGCGGCAGCGTGGGCAACGTCATCCTTGCCATCACGGTGGCGGAAATCCCGCGCGTGTCGCGCCTCGTGCG
CGGCGTGGTGCTGTCGCTCCGCGAGCAGCCCTATGTGGACGGGGCGATCGCGTCTGGCACGCGCACGCCCATGATCATCC
TGCGCCACATCCTCCCCAACACGCTGGCGCCCATGACCGTGCAGGCCACCTATATCTGCGGCAGCGCCATGATCGTGGAG
GCCATCCTCTCCTTCATCGGCGCCGGCACGCCACCCAACATCCCCTCCTGGGGCAACATCATGGCCGAGGGCCGGGCGCT
GTGGCAGGTGAAGCCGTTCATCGTCTTCTTCCCCGCAGCGTTCCTGTCCGTGACCGTGCTCGCCGTGAACCTCATGGGCG
ACGGCCTGCGCGACATGCTCGACCCACGTCAGGCGAAGGGGGTATGA

Upstream 100 bases:

>100_bases
CGGTCATCCAGGGCGTCGTGCTGCTGTTCAGCTTCGTCTACGTCCTCGTGAACCTGATCATCGACATCCTCTACACCTTC
CTTGATCCGAGGATCCGCTA

Downstream 100 bases:

>100_bases
CCATGGCCCTGCTCGAAGTCGAGAACCTCCAGGTCCACTTCCGCACGCCGGGCGGCGTCAATCGCGCGGTCAATGGCGTG
TCCTTCCATGTGGAGGAAGG

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSLANDHPGAAPPEGLAIATELPDILKARKPRTGFIGFLRRHPTIAIGGALLLVLIFIAVFAPYLGTVDPSALSPARRTR
APSAQYWFGTDMLGRDIYSRVLYGTRVSLIVGFAVAFFASLGGLAIGLIAGYVRWLDSLVMRVMDSLMSIPPILLAVSLM
AITRGSVGNVILAITVAEIPRVSRLVRGVVLSLREQPYVDGAIASGTRTPMIILRHILPNTLAPMTVQATYICGSAMIVE
AILSFIGAGTPPNIPSWGNIMAEGRALWQVKPFIVFFPAAFLSVTVLAVNLMGDGLRDMLDPRQAKGV

Sequences:

>Translated_308_residues
MSLANDHPGAAPPEGLAIATELPDILKARKPRTGFIGFLRRHPTIAIGGALLLVLIFIAVFAPYLGTVDPSALSPARRTR
APSAQYWFGTDMLGRDIYSRVLYGTRVSLIVGFAVAFFASLGGLAIGLIAGYVRWLDSLVMRVMDSLMSIPPILLAVSLM
AITRGSVGNVILAITVAEIPRVSRLVRGVVLSLREQPYVDGAIASGTRTPMIILRHILPNTLAPMTVQATYICGSAMIVE
AILSFIGAGTPPNIPSWGNIMAEGRALWQVKPFIVFFPAAFLSVTVLAVNLMGDGLRDMLDPRQAKGV
>Mature_307_residues
SLANDHPGAAPPEGLAIATELPDILKARKPRTGFIGFLRRHPTIAIGGALLLVLIFIAVFAPYLGTVDPSALSPARRTRA
PSAQYWFGTDMLGRDIYSRVLYGTRVSLIVGFAVAFFASLGGLAIGLIAGYVRWLDSLVMRVMDSLMSIPPILLAVSLMA
ITRGSVGNVILAITVAEIPRVSRLVRGVVLSLREQPYVDGAIASGTRTPMIILRHILPNTLAPMTVQATYICGSAMIVEA
ILSFIGAGTPPNIPSWGNIMAEGRALWQVKPFIVFFPAAFLSVTVLAVNLMGDGLRDMLDPRQAKGV

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=39.5759717314488, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787760, Length=278, Percent_Identity=35.9712230215827, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1789964, Length=280, Percent_Identity=36.7857142857143, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787498, Length=261, Percent_Identity=36.3984674329502, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=35, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1787549, Length=252, Percent_Identity=32.5396825396825, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=32.4561403508772, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32917; Mature: 32785

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLANDHPGAAPPEGLAIATELPDILKARKPRTGFIGFLRRHPTIAIGGALLLVLIFIAV
CCCCCCCCCCCCCCCEEEHHHCHHHHHHCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHH
FAPYLGTVDPSALSPARRTRAPSAQYWFGTDMLGRDIYSRVLYGTRVSLIVGFAVAFFAS
HHHHHCCCCCHHCCCHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGLAIGLIAGYVRWLDSLVMRVMDSLMSIPPILLAVSLMAITRGSVGNVILAITVAEIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHH
RVSRLVRGVVLSLREQPYVDGAIASGTRTPMIILRHILPNTLAPMTVQATYICGSAMIVE
HHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
AILSFIGAGTPPNIPSWGNIMAEGRALWQVKPFIVFFPAAFLSVTVLAVNLMGDGLRDML
HHHHHHCCCCCCCCCCCHHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
DPRQAKGV
CCHHHCCC
>Mature Secondary Structure 
SLANDHPGAAPPEGLAIATELPDILKARKPRTGFIGFLRRHPTIAIGGALLLVLIFIAV
CCCCCCCCCCCCCCEEEHHHCHHHHHHCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHHH
FAPYLGTVDPSALSPARRTRAPSAQYWFGTDMLGRDIYSRVLYGTRVSLIVGFAVAFFAS
HHHHHCCCCCHHCCCHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGLAIGLIAGYVRWLDSLVMRVMDSLMSIPPILLAVSLMAITRGSVGNVILAITVAEIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHH
RVSRLVRGVVLSLREQPYVDGAIASGTRTPMIILRHILPNTLAPMTVQATYICGSAMIVE
HHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
AILSFIGAGTPPNIPSWGNIMAEGRALWQVKPFIVFFPAAFLSVTVLAVNLMGDGLRDML
HHHHHHCCCCCCCCCCCHHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
DPRQAKGV
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]