| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423633
Identifier: 158423633
GI number: 158423633
Start: 2317499
End: 2318299
Strand: Reverse
Name: 158423633
Synonym: AZC_2009
Alternate gene names: NA
Gene position: 2318299-2317499 (Counterclockwise)
Preceding gene: 158423635
Following gene: 158423622
Centisome position: 43.17
GC content: 66.29
Gene sequence:
>801_bases ATGGCCCATGCCTTCAACCGCGAAACCGCTCCGCAAGCCGGAGCGGCGGCGTCCAACCGCCCGGCGCTCGATGGGGAGGA GGTGTGGAACGCCCGCGTGGAGCTCGCCGCCTGTTTCCGCTTCGCCGCCCGTCTCGGCATGCACGAGGGCATCTGCAACC ACTTCTCCGCCGTCGTGCCGGGCCATGATGACCTCTTCCTGGTCAATCCCTACGGCTACGCGTTCAGCGAGATCACCGCG TCCCATCTGCTGGTGTGCGATTTCCACGGCAACGTGCTTTCGGGCAGCGGCGTGCCGGAAGCGACTGCCTTCTTCATCCA TGCCCGCATGCACCTCAACGTGCCGCGCGCCCGCGTCGCCTTCCACACCCACATGCCCTATGCCACCGCGCTCTCGATGG TGGAGGGCGAGCCGCTTGTCTTCGCCGGCCAGACGGCGTTGAAGTTCTACGGCCGCACGGTGGTGGACCACGATTATAAC GGCCTCGCCCTCGACAGCACGGAAGGCGACCGCATCGCTGCCTCCGTCGGGGATGCGGACATCGTCTTCATGAAGCACCA TGGCGTCATGGTGCTCGGCCGCACCATCGCGGAGGCGTGGGACGATCTCTATTATCTGGAACGGGCTTGCGAGGTGCAGT GCCTCGCCATGGCCACCGGCCGCCCCGTTCTGCCGGTGAAGACCGAAATTGCCGAAGCTGCCGCCCGGCAGATGCGCGAG GGAGATGCGGAATCCGCCCGCCTGCACCTCGAAAGCATGAAGCGCATCCTCGACCGCGAAGAGCCCGCCTACCGCACCTG A
Upstream 100 bases:
>100_bases GCCCGTGCATGTCGTGGTGCCCGAGCCCTTCGGGCGCCGGTCTTTCAGGAAGCCGACCGCGATCGAGCATCGCTCCGGCT CCGATGCAGGAGAGAAGTCC
Downstream 100 bases:
>100_bases GGGGCGATCGAACTGGTCGTCAGGCGTCGCCGGCCACCCCCCGGCGCGCCTTGTCCAGTTCGTCCGCATAGCGACGCAGC AGGAAGGCCTCGCTGAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MAHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVPGHDDLFLVNPYGYAFSEITA SHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVAFHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYN GLALDSTEGDRIAASVGDADIVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE GDAESARLHLESMKRILDREEPAYRT
Sequences:
>Translated_266_residues MAHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVPGHDDLFLVNPYGYAFSEITA SHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVAFHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYN GLALDSTEGDRIAASVGDADIVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE GDAESARLHLESMKRILDREEPAYRT >Mature_265_residues AHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVPGHDDLFLVNPYGYAFSEITAS HLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVAFHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYNG LALDSTEGDRIAASVGDADIVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMREG DAESARLHLESMKRILDREEPAYRT
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family [H]
Homologues:
Organism=Homo sapiens, GI29826323, Length=232, Percent_Identity=29.7413793103448, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI29826325, Length=232, Percent_Identity=29.7413793103448, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI29826321, Length=193, Percent_Identity=30.0518134715026, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI29826319, Length=193, Percent_Identity=30.0518134715026, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI9257190, Length=195, Percent_Identity=28.7179487179487, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI297307158, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI9257192, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI297307160, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI89276787, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI9943848, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9951927, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI62912453, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533216, Length=201, Percent_Identity=28.8557213930348, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115533218, Length=202, Percent_Identity=28.7128712871287, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71989550, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989560, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989555, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989541, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989544, Length=241, Percent_Identity=29.4605809128631, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24655685, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281363755, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281363751, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24655690, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281363761, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281363759, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281363753, Length=200, Percent_Identity=28.5, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281363763, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI281363757, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI17136738, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 29170; Mature: 29039
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECC GHDDLFLVNPYGYAFSEITASHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVA CCCCEEEECCCCCHHHHHCCCEEEEEECCCCEECCCCCCCHHEEEEEEEEEECCCCCEEE FHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYNGLALDSTEGDRIAASVGDAD EEECCCHHHHHHHHCCCCEEEECCHHHHHHCCEEEECCCCCEEEECCCCCEEEEECCCCE IVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE EEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHC GDAESARLHLESMKRILDREEPAYRT CCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AHAFNRETAPQAGAAASNRPALDGEEVWNARVELAACFRFAARLGMHEGICNHFSAVVP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECC GHDDLFLVNPYGYAFSEITASHLLVCDFHGNVLSGSGVPEATAFFIHARMHLNVPRARVA CCCCEEEECCCCCHHHHHCCCEEEEEECCCCEECCCCCCCHHEEEEEEEEEECCCCCEEE FHTHMPYATALSMVEGEPLVFAGQTALKFYGRTVVDHDYNGLALDSTEGDRIAASVGDAD EEECCCHHHHHHHHCCCCEEEECCHHHHHHCCEEEECCCCCEEEECCCCCEEEEECCCCE IVFMKHHGVMVLGRTIAEAWDDLYYLERACEVQCLAMATGRPVLPVKTEIAEAAARQMRE EEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHC GDAESARLHLESMKRILDREEPAYRT CCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]