| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yhjX [H]
Identifier: 158423619
GI number: 158423619
Start: 2299542
End: 2301179
Strand: Reverse
Name: yhjX [H]
Synonym: AZC_1995
Alternate gene names: 158423619
Gene position: 2301179-2299542 (Counterclockwise)
Preceding gene: 158423622
Following gene: 158423618
Centisome position: 42.85
GC content: 68.13
Gene sequence:
>1638_bases ATGTCCGTCGCCACCGCCACTCCCGCCGCCGCCCCATTCCTCAGCCGGGAGCGGACCATCGCCGGTCCCGACTTCAACCG CTGGCTGGTGCCGCCGGCGGCGCTGGCGATCCATCTGTGCATCGGCATGGCCTACGGCTTCAGCGTCTTCTGGCTGCCGC TCTCGCGCGCGGTAGGCATCACGCAGCCCCTCGCCTGCCCGGCGGACATGGGCTTTGCAGCCCGCCTCGTCGCCACCCAG TGCGACTGGCCCATCAGCCTGCTTGGCTGGATGTACACGCTCTTCTTCGTGCTGCTGGGCTGTTCGGCGGCGCTCTTCGG CGGCTGGCTGGAGCATGCGGGTCCGCGCAAGGCGGGACTGGTCTCCGCCGCCTGCTGGTGTGGCGGGCTCGTGATCTCGG CGCTCGGCGTCTATCTGCACCAGATCTGGATGCTCTGGCTCGGCTCGGGGGTGATCGGCGGCATCGGGCTCGGACTCGGC TATATTTCGCCCGTCTCCACCCTCATCAAATGGTTCCCGGACCGGCGCGGCATGGCCACCGGCATGGCCATCATGGGCTT TGGCGGCGGCGCCATGATCGGTGCGCCACTGGCGGACATCCTCATGCGTACCTTCGCCGGCCCCGGCTCGGTGGGCGTGT GGCAGACGTTTCTCGCCATGGCGGGTATCTATTTCGTCTTCATGGTCTGCGGTGCGCTCGGTTATCGCGTTCCCGCCGAG GGCTGGAAACCGGCCGGCTGGCGCGGGCCGACGGTGAGCCGCAACCGCATGGTCACGCCCCATGACGTGCATCTCGACAT CGCCTGGAAGACCCCGCAGTTCTGGCTGCTGTGGGCGGTGCTGTGCCTCAATGTCTCGGCGGGGATCGGCGTCCTCGGTA TGGCCTCGCCCATGTTGCAGGAGGTGTTCGGCGGGCGGCTGATCGGGCTCGACCTCGGCTTTGCCGATCTCTCCGCCGCA CAGAAGGGCCAGATCGCCGCCATTGCGGCGGGCTTCACCGGCCTCCTCAGCCTGTGCAACATCCTCGGCCGCTTCTTCTG GGCCTCCGCCTCCGACCGGCTTGGGCGCAAGATGACCTTCGCCATCTTCTTCCTGCTCGGCATCGTGCTGTATGCGGCCG TACCGTGGTCGGCCCATCAGGGGTCGAGCGTGCTGTTCGTGCTGATCTTCTGCGTGATCCTGTCCATGTATGGCGGCGGC TTTGCCACCATTCCGGCCTATCTCGCGGACATCTTCGGCACCCGCATGGTGGGAGCGATCCACGGCCGGCTGCTCACTGC CTGGGCGGCGGCCGGCATCCTCGGGCCGGTGCTCATCAACTATCTGCGGGAATATCAGATCGCCGCCGGCATCCCGCAGT CCGCAGCCTATGACCAGACCATGTACATCCTTGCCGGCCTTCTGGCGCTGGGGCTCCTGTGCAACCTGCTGGTCCGCCCC GTGGCGGAGCGACTCTATATGCGCGCCGTGACGCTGACGCCCCAGGCGGATGCAGCGTCCCCCTTGCCCATCCGGACGGT GCAGGCAAGCGCGGCGCGGCCGGGCGGGCTCGTCCTGCTCACGTGGCTCGCGGTCGGCCTGCCGCTTGCCTGGGGCATGT GGGTCACCCTCCAGAAGGCGGCGGTGCTGCTGCATTGA
Upstream 100 bases:
>100_bases TGACGCGGTGGCCCAGACGGATGCTGGCCCCGGTCACCGGGTCCCCCGCTCAGCGGGCTCTCCGCCGTTCCTGCCGCATG CTTCGATAGGCCAAGACATC
Downstream 100 bases:
>100_bases GGGCGATCCTGCAGCGATGACAGGGTGATGAAGCCGATAAAAAGCACACCCCACACCCCGTTACCCGCATACTGATACCG ACTACGGCTAGGTTGCCGCG
Product: MFS permease-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MSVATATPAAAPFLSRERTIAGPDFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAVGITQPLACPADMGFAARLVATQ CDWPISLLGWMYTLFFVLLGCSAALFGGWLEHAGPRKAGLVSAACWCGGLVISALGVYLHQIWMLWLGSGVIGGIGLGLG YISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLADILMRTFAGPGSVGVWQTFLAMAGIYFVFMVCGALGYRVPAE GWKPAGWRGPTVSRNRMVTPHDVHLDIAWKTPQFWLLWAVLCLNVSAGIGVLGMASPMLQEVFGGRLIGLDLGFADLSAA QKGQIAAIAAGFTGLLSLCNILGRFFWASASDRLGRKMTFAIFFLLGIVLYAAVPWSAHQGSSVLFVLIFCVILSMYGGG FATIPAYLADIFGTRMVGAIHGRLLTAWAAAGILGPVLINYLREYQIAAGIPQSAAYDQTMYILAGLLALGLLCNLLVRP VAERLYMRAVTLTPQADAASPLPIRTVQASAARPGGLVLLTWLAVGLPLAWGMWVTLQKAAVLLH
Sequences:
>Translated_545_residues MSVATATPAAAPFLSRERTIAGPDFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAVGITQPLACPADMGFAARLVATQ CDWPISLLGWMYTLFFVLLGCSAALFGGWLEHAGPRKAGLVSAACWCGGLVISALGVYLHQIWMLWLGSGVIGGIGLGLG YISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLADILMRTFAGPGSVGVWQTFLAMAGIYFVFMVCGALGYRVPAE GWKPAGWRGPTVSRNRMVTPHDVHLDIAWKTPQFWLLWAVLCLNVSAGIGVLGMASPMLQEVFGGRLIGLDLGFADLSAA QKGQIAAIAAGFTGLLSLCNILGRFFWASASDRLGRKMTFAIFFLLGIVLYAAVPWSAHQGSSVLFVLIFCVILSMYGGG FATIPAYLADIFGTRMVGAIHGRLLTAWAAAGILGPVLINYLREYQIAAGIPQSAAYDQTMYILAGLLALGLLCNLLVRP VAERLYMRAVTLTPQADAASPLPIRTVQASAARPGGLVLLTWLAVGLPLAWGMWVTLQKAAVLLH >Mature_544_residues SVATATPAAAPFLSRERTIAGPDFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAVGITQPLACPADMGFAARLVATQC DWPISLLGWMYTLFFVLLGCSAALFGGWLEHAGPRKAGLVSAACWCGGLVISALGVYLHQIWMLWLGSGVIGGIGLGLGY ISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLADILMRTFAGPGSVGVWQTFLAMAGIYFVFMVCGALGYRVPAEG WKPAGWRGPTVSRNRMVTPHDVHLDIAWKTPQFWLLWAVLCLNVSAGIGVLGMASPMLQEVFGGRLIGLDLGFADLSAAQ KGQIAAIAAGFTGLLSLCNILGRFFWASASDRLGRKMTFAIFFLLGIVLYAAVPWSAHQGSSVLFVLIFCVILSMYGGGF ATIPAYLADIFGTRMVGAIHGRLLTAWAAAGILGPVLINYLREYQIAAGIPQSAAYDQTMYILAGLLALGLLCNLLVRPV AERLYMRAVTLTPQADAASPLPIRTVQASAARPGGLVLLTWLAVGLPLAWGMWVTLQKAAVLLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=363, Percent_Identity=24.5179063360882, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 57911; Mature: 57779
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVATATPAAAPFLSRERTIAGPDFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAVGI CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TQPLACPADMGFAARLVATQCDWPISLLGWMYTLFFVLLGCSAALFGGWLEHAGPRKAGL CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VSAACWCGGLVISALGVYLHQIWMLWLGSGVIGGIGLGLGYISPVSTLIKWFPDRRGMAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH GMAIMGFGGGAMIGAPLADILMRTFAGPGSVGVWQTFLAMAGIYFVFMVCGALGYRVPAE CEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GWKPAGWRGPTVSRNRMVTPHDVHLDIAWKTPQFWLLWAVLCLNVSAGIGVLGMASPMLQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCHHHH EVFGGRLIGLDLGFADLSAAQKGQIAAIAAGFTGLLSLCNILGRFFWASASDRLGRKMTF HHHCCEEEEEECCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIFFLLGIVLYAAVPWSAHQGSSVLFVLIFCVILSMYGGGFATIPAYLADIFGTRMVGAI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH HGRLLTAWAAAGILGPVLINYLREYQIAAGIPQSAAYDQTMYILAGLLALGLLCNLLVRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAERLYMRAVTLTPQADAASPLPIRTVQASAARPGGLVLLTWLAVGLPLAWGMWVTLQKA HHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AVLLH HHHCC >Mature Secondary Structure SVATATPAAAPFLSRERTIAGPDFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSRAVGI CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TQPLACPADMGFAARLVATQCDWPISLLGWMYTLFFVLLGCSAALFGGWLEHAGPRKAGL CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VSAACWCGGLVISALGVYLHQIWMLWLGSGVIGGIGLGLGYISPVSTLIKWFPDRRGMAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH GMAIMGFGGGAMIGAPLADILMRTFAGPGSVGVWQTFLAMAGIYFVFMVCGALGYRVPAE CEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GWKPAGWRGPTVSRNRMVTPHDVHLDIAWKTPQFWLLWAVLCLNVSAGIGVLGMASPMLQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCHHHH EVFGGRLIGLDLGFADLSAAQKGQIAAIAAGFTGLLSLCNILGRFFWASASDRLGRKMTF HHHCCEEEEEECCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AIFFLLGIVLYAAVPWSAHQGSSVLFVLIFCVILSMYGGGFATIPAYLADIFGTRMVGAI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH HGRLLTAWAAAGILGPVLINYLREYQIAAGIPQSAAYDQTMYILAGLLALGLLCNLLVRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAERLYMRAVTLTPQADAASPLPIRTVQASAARPGGLVLLTWLAVGLPLAWGMWVTLQKA HHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AVLLH HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]