| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gltK [H]
Identifier: 158423549
GI number: 158423549
Start: 2227736
End: 2228428
Strand: Reverse
Name: gltK [H]
Synonym: AZC_1925
Alternate gene names: 158423549
Gene position: 2228428-2227736 (Counterclockwise)
Preceding gene: 158423550
Following gene: 158423548
Centisome position: 41.5
GC content: 64.79
Gene sequence:
>693_bases ATGAACGGGTCCTTCGACTTCGGCGCCATCGCGGCCGCCCTGCCCTACCTGCTCGGCGACGGGCTCGGTCTCACCTTCGG CCTCACGGTGCTTGCGGGCGCCATGGGATTCGGTCTCGGCATCCTGCTCGCCGTTCTGCGCCTCTCGCCGCTCAGGCTGC TGTCCGTACCGGCGACGCTGTATGTCAATCTCGTGCGGTCGGTGCCGCTGGTGCTGATCATCTTCTGGTTCTACTTCCTC GTGCCTTACATCGGCGCATGGCTCGTGGGGTCGAGCCGGCCCATCCAGGTGGGTGCCTTCCGCTCCGCCTTGGTCAGCTT CACTTTGTTCGAGGCGGCCTATTTCTGCGAGATCATACGTGGCGGCATCCAGTCCATCCGGCGCGGCCAGATCTCCGCCG GCCTCGCGCTGGGGCTGACCCGCCGGCAGACCTTCCTCAAGGTCGTCCTGCCGCAGGCCATCCGGAATATGACGCCGTCG CTCCTGACGCGGCTCATCGTGCTCTTCCAGGACACATCCCTCGTTTATGTCGTCGGTCTCACCGACTTTCTCGGCGCGGC GTCGAAAGTTGGCGCGCGGGACGGCCGCCTGACAGAGTTCTACGTCTTCGTGGCCGTCGTCTATCTCGTCATCTGTTTCG CCGCCTCTCGTCTGGTGAAGCGCCTGGAACTGCGCTGGAAGGTGGCTCGATGA
Upstream 100 bases:
>100_bases ACGGCTGCATCGTGCTGGCCATGCGCTGGCTCGAACGCCGCCTCGCCGTGCCCGGCCTCATCGGTGCTGCGGCCAGCAGT CCGGCGCGGGTGGCGCAGTC
Downstream 100 bases:
>100_bases TCTCCGCTCCTGAAAGCAGCCCGATGATCGAAATCAGGAATGTCAGCAAGTGGTACGGCCCGCATCAGGTGCTGAACGCG TGCTCCACGCAGGTCGCCAA
Product: glutamate/aspartate transporter permease 1
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNGSFDFGAIAAALPYLLGDGLGLTFGLTVLAGAMGFGLGILLAVLRLSPLRLLSVPATLYVNLVRSVPLVLIIFWFYFL VPYIGAWLVGSSRPIQVGAFRSALVSFTLFEAAYFCEIIRGGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTPS LLTRLIVLFQDTSLVYVVGLTDFLGAASKVGARDGRLTEFYVFVAVVYLVICFAASRLVKRLELRWKVAR
Sequences:
>Translated_230_residues MNGSFDFGAIAAALPYLLGDGLGLTFGLTVLAGAMGFGLGILLAVLRLSPLRLLSVPATLYVNLVRSVPLVLIIFWFYFL VPYIGAWLVGSSRPIQVGAFRSALVSFTLFEAAYFCEIIRGGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTPS LLTRLIVLFQDTSLVYVVGLTDFLGAASKVGARDGRLTEFYVFVAVVYLVICFAASRLVKRLELRWKVAR >Mature_230_residues MNGSFDFGAIAAALPYLLGDGLGLTFGLTVLAGAMGFGLGILLAVLRLSPLRLLSVPATLYVNLVRSVPLVLIIFWFYFL VPYIGAWLVGSSRPIQVGAFRSALVSFTLFEAAYFCEIIRGGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTPS LLTRLIVLFQDTSLVYVVGLTDFLGAASKVGARDGRLTEFYVFVAVVYLVICFAASRLVKRLELRWKVAR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=50.4504504504504, Blast_Score=194, Evalue=5e-51, Organism=Escherichia coli, GI1787030, Length=225, Percent_Identity=32.8888888888889, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI87082239, Length=215, Percent_Identity=35.3488372093023, Blast_Score=112, Evalue=1e-26, Organism=Escherichia coli, GI1786874, Length=197, Percent_Identity=32.994923857868, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=31.924882629108, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1787087, Length=233, Percent_Identity=27.0386266094421, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788646, Length=196, Percent_Identity=29.0816326530612, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI48994930, Length=156, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25098; Mature: 25098
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGSFDFGAIAAALPYLLGDGLGLTFGLTVLAGAMGFGLGILLAVLRLSPLRLLSVPATL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YVNLVRSVPLVLIIFWFYFLVPYIGAWLVGSSRPIQVGAFRSALVSFTLFEAAYFCEIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH GGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTPSLLTRLIVLFQDTSLVYVVGL HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEH TDFLGAASKVGARDGRLTEFYVFVAVVYLVICFAASRLVKRLELRWKVAR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNGSFDFGAIAAALPYLLGDGLGLTFGLTVLAGAMGFGLGILLAVLRLSPLRLLSVPATL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YVNLVRSVPLVLIIFWFYFLVPYIGAWLVGSSRPIQVGAFRSALVSFTLFEAAYFCEIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH GGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTPSLLTRLIVLFQDTSLVYVVGL HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEH TDFLGAASKVGARDGRLTEFYVFVAVVYLVICFAASRLVKRLELRWKVAR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]