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The map label for this gene is yddQ [C]

Identifier: 158423493

GI number: 158423493

Start: 2140922

End: 2141800

Strand: Reverse

Name: yddQ [C]

Synonym: AZC_1869

Alternate gene names: 158423493

Gene position: 2141800-2140922 (Counterclockwise)

Preceding gene: 158423494

Following gene: 158423492

Centisome position: 39.89

GC content: 63.59

Gene sequence:

>879_bases
ATGTCCGCTATCGGGAGCATGCAATCCCATGCCCGTCGCCTGCGCTTGGGTGAGCTGCTCGCCAACCCTGCGCTCCTGTT
CGGCGGCACGATCCTGCTGTTGGTCGTGCTGTCGGCCATCTTTGCTCCCCAGATCGCAGGAACAGACCCCTTCCTGATAC
GACCACGTCTGCGCTTCCGCGCGCCGGACAGCGCGTTCTGGTTCGGCACTGACGCGTTGGGTCGAGACGTCTTCGCGCTT
GTCGTACATGGTGGGCGCCTGTCTCTTCTGGTGGGACTGCTGTGCGCGCTGGCAGGTGCGGTAATCGGCTCTCTTCTGGG
CCTCGTTGCCGGATATCTGCGTGCCTTTGATGCCGTCATCATGCGTCTCATGGATGGCATGATGGCGATCCCCAGCCTGT
TGTTCGCGGTGGCTTTGGTGTGCCTGGTCGGCCCCAGCCTCTTCTCCATCGTCGCCGCGATCACTTTCTCAGAAATTCCG
CGTGTCACCCGCCTCGTTCGCAGTGTCGTTCTCAGCGTACGGGAAGAATCCTATGTGCGTGCGGCGGAAGGGCTTGGCAT
CCCCGGCTATCTGGTGCTGCTGCGCCACATCCTGCCGACATGCCTCGCCCCGCTCATTGTGCAGACCACCTATATGTTCG
CGGCTGCCATGCTCGCGGAAGCGGTTCTGGGCTTCCTCGGCGTCGGGTTCCCGCCCGACATGCCGAGCTGGGGCAACGTA
CTGGCCGAGGGAAGAGCTGTGTTTCAACGCGCCCCCTGGACCATCATCGCGCCGGGGCTCTTCCTGGCAGCGACAGTGAT
GGCCGTGAACCTGCTGGGCGACGGGCTGCGGGATCGTCTGGATCCACGCCTGTCTCGTGCAACCGGAGCGACGTCATGA

Upstream 100 bases:

>100_bases
CTGATGCTGTTCTTCGCCTCCATATTCATCGGCGTGAATCTGTTGATCGACATTGCTTACGTGATCGTCGATCCCCGCAT
CCGCTATTGAGGGCCTACCC

Downstream 100 bases:

>100_bases
CCACCGATGCGCCCGTTCTCGAAATCGAGCACCTGTCGATCGCCCTGCCGCATGGCCTCGACCGGCGGTTCGCGGTTCAC
GATCTCTCACTCGCCGTGCG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSAIGSMQSHARRLRLGELLANPALLFGGTILLLVVLSAIFAPQIAGTDPFLIRPRLRFRAPDSAFWFGTDALGRDVFAL
VVHGGRLSLLVGLLCALAGAVIGSLLGLVAGYLRAFDAVIMRLMDGMMAIPSLLFAVALVCLVGPSLFSIVAAITFSEIP
RVTRLVRSVVLSVREESYVRAAEGLGIPGYLVLLRHILPTCLAPLIVQTTYMFAAAMLAEAVLGFLGVGFPPDMPSWGNV
LAEGRAVFQRAPWTIIAPGLFLAATVMAVNLLGDGLRDRLDPRLSRATGATS

Sequences:

>Translated_292_residues
MSAIGSMQSHARRLRLGELLANPALLFGGTILLLVVLSAIFAPQIAGTDPFLIRPRLRFRAPDSAFWFGTDALGRDVFAL
VVHGGRLSLLVGLLCALAGAVIGSLLGLVAGYLRAFDAVIMRLMDGMMAIPSLLFAVALVCLVGPSLFSIVAAITFSEIP
RVTRLVRSVVLSVREESYVRAAEGLGIPGYLVLLRHILPTCLAPLIVQTTYMFAAAMLAEAVLGFLGVGFPPDMPSWGNV
LAEGRAVFQRAPWTIIAPGLFLAATVMAVNLLGDGLRDRLDPRLSRATGATS
>Mature_291_residues
SAIGSMQSHARRLRLGELLANPALLFGGTILLLVVLSAIFAPQIAGTDPFLIRPRLRFRAPDSAFWFGTDALGRDVFALV
VHGGRLSLLVGLLCALAGAVIGSLLGLVAGYLRAFDAVIMRLMDGMMAIPSLLFAVALVCLVGPSLFSIVAAITFSEIPR
VTRLVRSVVLSVREESYVRAAEGLGIPGYLVLLRHILPTCLAPLIVQTTYMFAAAMLAEAVLGFLGVGFPPDMPSWGNVL
AEGRAVFQRAPWTIIAPGLFLAATVMAVNLLGDGLRDRLDPRLSRATGATS

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=267, Percent_Identity=41.1985018726592, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=39.3501805054152, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=42.7450980392157, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1787498, Length=281, Percent_Identity=33.8078291814947, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=33.75, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787549, Length=250, Percent_Identity=33.6, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788505, Length=223, Percent_Identity=30.9417040358744, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30979; Mature: 30847

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIGSMQSHARRLRLGELLANPALLFGGTILLLVVLSAIFAPQIAGTDPFLIRPRLRFR
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHCC
APDSAFWFGTDALGRDVFALVVHGGRLSLLVGLLCALAGAVIGSLLGLVAGYLRAFDAVI
CCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRLMDGMMAIPSLLFAVALVCLVGPSLFSIVAAITFSEIPRVTRLVRSVVLSVREESYVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEGLGIPGYLVLLRHILPTCLAPLIVQTTYMFAAAMLAEAVLGFLGVGFPPDMPSWGNV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
LAEGRAVFQRAPWTIIAPGLFLAATVMAVNLLGDGLRDRLDPRLSRATGATS
HHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC
>Mature Secondary Structure 
SAIGSMQSHARRLRLGELLANPALLFGGTILLLVVLSAIFAPQIAGTDPFLIRPRLRFR
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHCC
APDSAFWFGTDALGRDVFALVVHGGRLSLLVGLLCALAGAVIGSLLGLVAGYLRAFDAVI
CCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRLMDGMMAIPSLLFAVALVCLVGPSLFSIVAAITFSEIPRVTRLVRSVVLSVREESYVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEGLGIPGYLVLLRHILPTCLAPLIVQTTYMFAAAMLAEAVLGFLGVGFPPDMPSWGNV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
LAEGRAVFQRAPWTIIAPGLFLAATVMAVNLLGDGLRDRLDPRLSRATGATS
HHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]