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The map label for this gene is atoS [C]

Identifier: 158423290

GI number: 158423290

Start: 1905896

End: 1908454

Strand: Direct

Name: atoS [C]

Synonym: AZC_1666

Alternate gene names: 158423290

Gene position: 1905896-1908454 (Clockwise)

Preceding gene: 158423289

Following gene: 158423291

Centisome position: 35.49

GC content: 69.21

Gene sequence:

>2559_bases
ATGGTAGGGTTTTCCAACAAGGATGACTGGATGACGGGCGGAGCGGGTACCCCGGATCACGGTCCGGCGGAACGGGCAAC
CGCAGGCCAGACGCAGCAATTCACCAGACTGATCCTCGCTGGAGCAGCCTTTGCGGGCGCTTTCGCGGCGGTGCTGGTGC
AAGGGTCCGGTTCGAGCTTCATCCTTCCCGTCCTGGCTGCGCTCGCCTGCGTCGGGCTCGTCTCCATCGCCAATGCCATC
ATCCGCTTCGGGCTCGCGCGGCCGCAGACGGGCGATGAAATGTCGCGTCTTCTCGTTGCGGCGACCAGCGACGGCGTCGC
CGTCGTGGAAGACGGCGAGCAGATTTCGAGCGCCAATACGCCCTATCTGCGCCTGACCCGCAGCCGCGAAGGCCAGGCGC
CCCTTCCGGAGCGCTTCCTCCAGCGTATTCCCGGCGGGCAGGCGATGCTCGCGGAAATTCTGCACGCGGTCGCCGAAGGC
ACCTCCTGCACGCGAATGTTCCCCTTCGATGCCGACCCCGACGGCCGCAAGCTGCGGGTGTCGGTGCATCCGCTCGGCGG
TCGCCGCCGCGCCATGTGGGTGCTGTCGGTCACCGGTGCGGAGCGCAGCGACGCGACCGCCGTGGTTCAAGCAGCCACCG
TGCCTGCTGGTCCTGCCGATGCTGCGGTGACGGAACATTCCGCCGCCGCCGGCCTGCTGGCGCTGTGGGAGCGGGCCCCG
CTCGGCATGTTCGTGCTGACGAGCGAGGAAGCCTGGCTGGCGAACGGCGCTCTGGCGCGGCTGCTGGGCTACGACCTCGC
CGAAGTCGGCGCCGGGCGTATGTCCTTCCGCGAGATCATCCCTCCGTCCTCCGCCGGTGCCATGCTGGCTGCCCTGACCA
AGGGGCGCAGCGACCCGGACGGGCTCGACATCGACGTCCTGCGCCGCGATGGCTCCACCCTGCCGGTCCGCGCTTTCGTC
GGTGGCCTGCCCATGGGTGAATGCGTGGTGGTTCTGGCGCCGCGCGCCCGTGCGGCCGCCGCAGCGCCGAGCCTTGCCGC
ACCGGTGGCGCGAGGATCTGACGACGCCGCCTTCTTCTCCCGATCGCCGCTGGCCATGGCCACCATCGATGCCAGGGGGC
GCCTCACCGAAGCCAACGGCAGCTTTGCCCGCCTGTTCTCCGACGGCCGCACGCTGACCGGTCTCAAGCTCGAACGGCTT
GTGGTGGAGCGGGACCAGATGGCGGTCGAGCAACTGGTGCAGGACGCCCTGCGCGACGGCGCCTCGGGCGCGGCGCAGGC
GGTGGACATCGCCATCGCCGCCGAGGGTGGCCGGTCCGCGCGGCTCTATGCGGCGGCGCTGGGCGGACCCGGCGGGGGGG
CGGCCATCTATGCGGTGGACACCACGGCCCAGCGGGCGCTGGAGGTGCAGTTCGCCCAGTCGCAGAAGATGCAGGCCATC
GGTCAGCTCGCCGGCGGGGTGGCGCACGACTTCAACAACGTTCTGACCGCCATCATCGGCTATTGCGACCTGCTGCTGGC
GAGCCACCGGCCCAGCGATCCGTCCTTCCCGGACATCATGCAGATCAAGCAGAATGCCAACCGCGCCGCCGGTCTCGTGC
GGCAGCTTCTGGCCTTCTCGCGCCGCCAGACCCTGCGACCGCAGGTGATCCAGCTCACCGACGTGATCTCGGACCTCTCC
ATGCTGCTGCGCCGCCTCATCGGCGAGACCATCACGCTGGAGGTGGAGCACGGCCGCGACCTGTGGCCGGTGAAGGTGGA
CGTGAACCAGTTCGAACAGGTGATCGTCAATCTGGCGGTCAATGCCCGCGATGCCATGCCCGGCGGCGGGGCGCTGACGC
TGCGCACCCGCAATGTCACGGCGGCCGAGACGGCGGCGCTCGGCGACGGCACCGTGGCACCGGGCGACTATGTGCTGGTG
GAGGTGGTGGACACCGGCACCGGCATTCCGCCGGAGATCATGGACAAGATCTTCGAGCCCTTCTTCTCCACCAAGGAGGT
GGGCAAGGGCACGGGGCTCGGCCTCTCCACCGTCTATGGCATCGTCCAGCAGACGGGGGGCACGATTCTCGCCACCAGTA
CGCCGGGCGCGGGGACGACCTTCCGGGTCTTCCTGCCACGCCACGCCGAAGAGGCGGCAGAGGTGGAAGCCCGTCCCGCC
GAGCCTGACACGCGCACGGCGGATCTCACGGGGCAGGGGAGCGTGCTGCTCGTGGAGGACGAGGATGCGGTGCGGGCCTT
CGCCAGCCGCGCCCTCTCGGCCCGCGGCTACAATGTGGTGGCGGCCTCAGGCGGCGCCGAGGCCCTGGCCGTGGTGGATG
CCGCCGAGCATCGCTTCGATCTTGTCATCTCGGACGTGGTGATGCCGGAGATGGACGGGCCGACCCTGCTGCGGGAACTG
CGTGCCCGCCATCCGGAGCTGAAGGTCATCTTCATCTCCGGCTATGCGGAGGAGGCCTTTGCCAAGAATCTCCCTGCCAG
CGAGAAATTCGCTTTCCTGCCCAAGCCCTTCACTCTGAAGCAGCTGGTGGCGGCGGTGAAAGAGACCATCGCCTCCTGA

Upstream 100 bases:

>100_bases
TAAGAAATTGTTGACGATCGCGCGCGGATTTCAACCAATGCCGCTACTTTGCGTTAATTTCCGGGAATCATAACCTTCGC
CTTGGCCCGCTGGCGGCAAA

Downstream 100 bases:

>100_bases
ATGGCCGGCCAGGCGCGCCCCCAAGCGGCCGGTCGGACCATGCGCTGGGCTCATACGGCCATGCGACTTACCGCCGAAAT
GGGTATCACCAGTCGCCCGT

Product: sensor protein

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 852; Mature: 852

Protein sequence:

>852_residues
MVGFSNKDDWMTGGAGTPDHGPAERATAGQTQQFTRLILAGAAFAGAFAAVLVQGSGSSFILPVLAALACVGLVSIANAI
IRFGLARPQTGDEMSRLLVAATSDGVAVVEDGEQISSANTPYLRLTRSREGQAPLPERFLQRIPGGQAMLAEILHAVAEG
TSCTRMFPFDADPDGRKLRVSVHPLGGRRRAMWVLSVTGAERSDATAVVQAATVPAGPADAAVTEHSAAAGLLALWERAP
LGMFVLTSEEAWLANGALARLLGYDLAEVGAGRMSFREIIPPSSAGAMLAALTKGRSDPDGLDIDVLRRDGSTLPVRAFV
GGLPMGECVVVLAPRARAAAAAPSLAAPVARGSDDAAFFSRSPLAMATIDARGRLTEANGSFARLFSDGRTLTGLKLERL
VVERDQMAVEQLVQDALRDGASGAAQAVDIAIAAEGGRSARLYAAALGGPGGGAAIYAVDTTAQRALEVQFAQSQKMQAI
GQLAGGVAHDFNNVLTAIIGYCDLLLASHRPSDPSFPDIMQIKQNANRAAGLVRQLLAFSRRQTLRPQVIQLTDVISDLS
MLLRRLIGETITLEVEHGRDLWPVKVDVNQFEQVIVNLAVNARDAMPGGGALTLRTRNVTAAETAALGDGTVAPGDYVLV
EVVDTGTGIPPEIMDKIFEPFFSTKEVGKGTGLGLSTVYGIVQQTGGTILATSTPGAGTTFRVFLPRHAEEAAEVEARPA
EPDTRTADLTGQGSVLLVEDEDAVRAFASRALSARGYNVVAASGGAEALAVVDAAEHRFDLVISDVVMPEMDGPTLLREL
RARHPELKVIFISGYAEEAFAKNLPASEKFAFLPKPFTLKQLVAAVKETIAS

Sequences:

>Translated_852_residues
MVGFSNKDDWMTGGAGTPDHGPAERATAGQTQQFTRLILAGAAFAGAFAAVLVQGSGSSFILPVLAALACVGLVSIANAI
IRFGLARPQTGDEMSRLLVAATSDGVAVVEDGEQISSANTPYLRLTRSREGQAPLPERFLQRIPGGQAMLAEILHAVAEG
TSCTRMFPFDADPDGRKLRVSVHPLGGRRRAMWVLSVTGAERSDATAVVQAATVPAGPADAAVTEHSAAAGLLALWERAP
LGMFVLTSEEAWLANGALARLLGYDLAEVGAGRMSFREIIPPSSAGAMLAALTKGRSDPDGLDIDVLRRDGSTLPVRAFV
GGLPMGECVVVLAPRARAAAAAPSLAAPVARGSDDAAFFSRSPLAMATIDARGRLTEANGSFARLFSDGRTLTGLKLERL
VVERDQMAVEQLVQDALRDGASGAAQAVDIAIAAEGGRSARLYAAALGGPGGGAAIYAVDTTAQRALEVQFAQSQKMQAI
GQLAGGVAHDFNNVLTAIIGYCDLLLASHRPSDPSFPDIMQIKQNANRAAGLVRQLLAFSRRQTLRPQVIQLTDVISDLS
MLLRRLIGETITLEVEHGRDLWPVKVDVNQFEQVIVNLAVNARDAMPGGGALTLRTRNVTAAETAALGDGTVAPGDYVLV
EVVDTGTGIPPEIMDKIFEPFFSTKEVGKGTGLGLSTVYGIVQQTGGTILATSTPGAGTTFRVFLPRHAEEAAEVEARPA
EPDTRTADLTGQGSVLLVEDEDAVRAFASRALSARGYNVVAASGGAEALAVVDAAEHRFDLVISDVVMPEMDGPTLLREL
RARHPELKVIFISGYAEEAFAKNLPASEKFAFLPKPFTLKQLVAAVKETIAS
>Mature_852_residues
MVGFSNKDDWMTGGAGTPDHGPAERATAGQTQQFTRLILAGAAFAGAFAAVLVQGSGSSFILPVLAALACVGLVSIANAI
IRFGLARPQTGDEMSRLLVAATSDGVAVVEDGEQISSANTPYLRLTRSREGQAPLPERFLQRIPGGQAMLAEILHAVAEG
TSCTRMFPFDADPDGRKLRVSVHPLGGRRRAMWVLSVTGAERSDATAVVQAATVPAGPADAAVTEHSAAAGLLALWERAP
LGMFVLTSEEAWLANGALARLLGYDLAEVGAGRMSFREIIPPSSAGAMLAALTKGRSDPDGLDIDVLRRDGSTLPVRAFV
GGLPMGECVVVLAPRARAAAAAPSLAAPVARGSDDAAFFSRSPLAMATIDARGRLTEANGSFARLFSDGRTLTGLKLERL
VVERDQMAVEQLVQDALRDGASGAAQAVDIAIAAEGGRSARLYAAALGGPGGGAAIYAVDTTAQRALEVQFAQSQKMQAI
GQLAGGVAHDFNNVLTAIIGYCDLLLASHRPSDPSFPDIMQIKQNANRAAGLVRQLLAFSRRQTLRPQVIQLTDVISDLS
MLLRRLIGETITLEVEHGRDLWPVKVDVNQFEQVIVNLAVNARDAMPGGGALTLRTRNVTAAETAALGDGTVAPGDYVLV
EVVDTGTGIPPEIMDKIFEPFFSTKEVGKGTGLGLSTVYGIVQQTGGTILATSTPGAGTTFRVFLPRHAEEAAEVEARPA
EPDTRTADLTGQGSVLLVEDEDAVRAFASRALSARGYNVVAASGGAEALAVVDAAEHRFDLVISDVVMPEMDGPTLLREL
RARHPELKVIFISGYAEEAFAKNLPASEKFAFLPKPFTLKQLVAAVKETIAS

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=256, Percent_Identity=29.296875, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1790436, Length=246, Percent_Identity=31.7073170731707, Blast_Score=108, Evalue=2e-24,
Organism=Escherichia coli, GI1788713, Length=472, Percent_Identity=25.2118644067797, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI1790300, Length=307, Percent_Identity=32.2475570032573, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI87081816, Length=261, Percent_Identity=30.6513409961686, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI48994928, Length=228, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1786912, Length=252, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=121, Percent_Identity=33.8842975206612, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=34.453781512605, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI145693157, Length=256, Percent_Identity=25.390625, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 89287; Mature: 89287

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGFSNKDDWMTGGAGTPDHGPAERATAGQTQQFTRLILAGAAFAGAFAAVLVQGSGSSF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCC
ILPVLAALACVGLVSIANAIIRFGLARPQTGDEMSRLLVAATSDGVAVVEDGEQISSANT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCEEEEECCHHHCCCCC
PYLRLTRSREGQAPLPERFLQRIPGGQAMLAEILHAVAEGTSCTRMFPFDADPDGRKLRV
CEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEE
SVHPLGGRRRAMWVLSVTGAERSDATAVVQAATVPAGPADAAVTEHSAAAGLLALWERAP
EEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
LGMFVLTSEEAWLANGALARLLGYDLAEVGAGRMSFREIIPPSSAGAMLAALTKGRSDPD
CCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCC
GLDIDVLRRDGSTLPVRAFVGGLPMGECVVVLAPRARAAAAAPSLAAPVARGSDDAAFFS
CCEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHCCCCHHHHCCCCCCCCHHHC
RSPLAMATIDARGRLTEANGSFARLFSDGRTLTGLKLERLVVERDQMAVEQLVQDALRDG
CCCCEEEEECCCCCEECCCCCEEEHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
ASGAAQAVDIAIAAEGGRSARLYAAALGGPGGGAAIYAVDTTAQRALEVQFAQSQKMQAI
CCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
GQLAGGVAHDFNNVLTAIIGYCDLLLASHRPSDPSFPDIMQIKQNANRAAGLVRQLLAFS
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
RRQTLRPQVIQLTDVISDLSMLLRRLIGETITLEVEHGRDLWPVKVDVNQFEQVIVNLAV
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHH
NARDAMPGGGALTLRTRNVTAAETAALGDGTVAPGDYVLVEVVDTGTGIPPEIMDKIFEP
CCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
FFSTKEVGKGTGLGLSTVYGIVQQTGGTILATSTPGAGTTFRVFLPRHAEEAAEVEARPA
HHCHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCC
EPDTRTADLTGQGSVLLVEDEDAVRAFASRALSARGYNVVAASGGAEALAVVDAAEHRFD
CCCCCEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHH
LVISDVVMPEMDGPTLLRELRARHPELKVIFISGYAEEAFAKNLPASEKFAFLPKPFTLK
EEEHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCEEECCCCCCHH
QLVAAVKETIAS
HHHHHHHHHHCC
>Mature Secondary Structure
MVGFSNKDDWMTGGAGTPDHGPAERATAGQTQQFTRLILAGAAFAGAFAAVLVQGSGSSF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCC
ILPVLAALACVGLVSIANAIIRFGLARPQTGDEMSRLLVAATSDGVAVVEDGEQISSANT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCEEEEECCHHHCCCCC
PYLRLTRSREGQAPLPERFLQRIPGGQAMLAEILHAVAEGTSCTRMFPFDADPDGRKLRV
CEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEE
SVHPLGGRRRAMWVLSVTGAERSDATAVVQAATVPAGPADAAVTEHSAAAGLLALWERAP
EEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
LGMFVLTSEEAWLANGALARLLGYDLAEVGAGRMSFREIIPPSSAGAMLAALTKGRSDPD
CCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCC
GLDIDVLRRDGSTLPVRAFVGGLPMGECVVVLAPRARAAAAAPSLAAPVARGSDDAAFFS
CCEEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCHHHHCCCCHHHHCCCCCCCCHHHC
RSPLAMATIDARGRLTEANGSFARLFSDGRTLTGLKLERLVVERDQMAVEQLVQDALRDG
CCCCEEEEECCCCCEECCCCCEEEHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
ASGAAQAVDIAIAAEGGRSARLYAAALGGPGGGAAIYAVDTTAQRALEVQFAQSQKMQAI
CCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
GQLAGGVAHDFNNVLTAIIGYCDLLLASHRPSDPSFPDIMQIKQNANRAAGLVRQLLAFS
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH
RRQTLRPQVIQLTDVISDLSMLLRRLIGETITLEVEHGRDLWPVKVDVNQFEQVIVNLAV
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHH
NARDAMPGGGALTLRTRNVTAAETAALGDGTVAPGDYVLVEVVDTGTGIPPEIMDKIFEP
CCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
FFSTKEVGKGTGLGLSTVYGIVQQTGGTILATSTPGAGTTFRVFLPRHAEEAAEVEARPA
HHCHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCHHHHHCCCCCC
EPDTRTADLTGQGSVLLVEDEDAVRAFASRALSARGYNVVAASGGAEALAVVDAAEHRFD
CCCCCEEECCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHH
LVISDVVMPEMDGPTLLRELRARHPELKVIFISGYAEEAFAKNLPASEKFAFLPKPFTLK
EEEHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCEEECCCCCCHH
QLVAAVKETIAS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA