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The map label for this gene is clpS [H]

Identifier: 158423218

GI number: 158423218

Start: 1819041

End: 1819436

Strand: Direct

Name: clpS [H]

Synonym: AZC_1594

Alternate gene names: 158423218

Gene position: 1819041-1819436 (Clockwise)

Preceding gene: 158423217

Following gene: 158423219

Centisome position: 33.88

GC content: 61.36

Gene sequence:

>396_bases
ATGATGACAGGGCAAGAGATGGTTTCAGACATGTCGGGCGTCCGGGCGCCGCAGCCGCGGGCTGCCGGGGATGACGACAA
GCAGCGCCGGGGTCCGGGCGGACCCGGGACAGCCGTTATCACGCGCACCAAGCCGCAGGTGAAACGGCCCAATCTCTATC
GCGTTCTGCTGCTGAACGACGACTACACCCCCATGGATTTCGTGGTGCACGTGCTCGAGCGCTTCTTTTCCAAGAGCCGC
GAGGAAGCCAACACCATCATGCTGCACGTCCACCACCATGGTGTGGGCGAGTGCGGCGTCTACACCTACGAAGTGGCCGA
GACCAAGGTCACGCAGGTCATGGATTTTGCCCGCAAGCATCAGCATCCGCTGCAGTGCGTGATGGAAAAAAAGTGA

Upstream 100 bases:

>100_bases
CCTTGCCTGCTCTGGCGCTTCGGGGCTCTGCTTCCTATTATTCTGTCTGCGCTGAAGGTGGCCGCACGGGCCGTGCCTGC
CGGACAGGGCGCAGAAGCCG

Downstream 100 bases:

>100_bases
GCGCGCATCCCTGATTATCTCCATTGCGGTGCATCACGAGGCCGCGCGTGGATGTATTGGGGGGTTGCGCAGCGGGGAGG
TCGGTACGAAGTTTTACGGA

Product: ATP-dependent Clp protease adaptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MMTGQEMVSDMSGVRAPQPRAAGDDDKQRRGPGGPGTAVITRTKPQVKRPNLYRVLLLNDDYTPMDFVVHVLERFFSKSR
EEANTIMLHVHHHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK

Sequences:

>Translated_131_residues
MMTGQEMVSDMSGVRAPQPRAAGDDDKQRRGPGGPGTAVITRTKPQVKRPNLYRVLLLNDDYTPMDFVVHVLERFFSKSR
EEANTIMLHVHHHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK
>Mature_131_residues
MMTGQEMVSDMSGVRAPQPRAAGDDDKQRRGPGGPGTAVITRTKPQVKRPNLYRVLLLNDDYTPMDFVVHVLERFFSKSR
EEANTIMLHVHHHGVGECGVYTYEVAETKVTQVMDFARKHQHPLQCVMEKK

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=89, Percent_Identity=51.685393258427, Blast_Score=106, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 14864; Mature: 14864

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTGQEMVSDMSGVRAPQPRAAGDDDKQRRGPGGPGTAVITRTKPQVKRPNLYRVLLLND
CCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCEEEEEEECC
DYTPMDFVVHVLERFFSKSREEANTIMLHVHHHGVGECGVYTYEVAETKVTQVMDFARKH
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHC
QHPLQCVMEKK
CCCHHHHCCCC
>Mature Secondary Structure
MMTGQEMVSDMSGVRAPQPRAAGDDDKQRRGPGGPGTAVITRTKPQVKRPNLYRVLLLND
CCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCEEEEEEECC
DYTPMDFVVHVLERFFSKSREEANTIMLHVHHHGVGECGVYTYEVAETKVTQVMDFARKH
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHC
QHPLQCVMEKK
CCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]