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The map label for this gene is arnC [H]

Identifier: 158423206

GI number: 158423206

Start: 1806273

End: 1807010

Strand: Direct

Name: arnC [H]

Synonym: AZC_1582

Alternate gene names: 158423206

Gene position: 1806273-1807010 (Clockwise)

Preceding gene: 158423205

Following gene: 158423207

Centisome position: 33.64

GC content: 67.75

Gene sequence:

>738_bases
GTGACCTCCACCCTCGCCGGCGATGCCGGCACGCCGCGCCTGTCCGTCGTCATCGCCGTCAAGAACGAGGCGGGCAATGT
CACGCCGCTGATCGAGGAGATCGACGCGGCGTTCAAGGAGCCGTTCGAGTTGATCTTCGTAAACGACGGCTCCACCGACA
CCACGCCGCAGGAGCTGGCAGCGGCCGCGCGCACGCGCCCCTACATGCGGGTCATCACCCACGCCAATTCCTGTGGAAAG
TCGGCGGGCATGGATACCGGCGCGCGCCGCGCGCGGGGCGACATCCTCATCATGCTGGACGGCGACGGCCAGAACAATCC
GACCTATCTGCCCCAGATGGTCCGGGTGCTGGACGAGGGCGGACCGCGCGTCGGCATGGTCCAGGGCGAGCGGCAGGGAC
GCAAGGATACGGCCTTCAAGCGCTTCCAGTCCCGCACCGCCAACCGCGTGCGCCGCGCCTTGCTGAACGACGACACCCGC
GATACGGGATGCGGCCTGAAGGTGGTGCGCCGTCACATCTATGTCGCGCTGCCCATGTTCGACGGGCTCCACCGTTTCAC
GCCCGCGCTGGTGAAGCGCGAGGGATATGAGATCCGCACGCTGCCGGTGGTGGATCGGGCCCGGTGGCACGGTGTGTCCA
ACTACGGCTTCTGGAACCGTCTCTGGGTCGGCATCGCCGATCTTCTGGGTGTCTGGTGGCTGATCCGACGGCGGCGGGTG
CCGCAGGTCGTGGAGTGA

Upstream 100 bases:

>100_bases
CGACGGCACCATCCGCCCGAAGCCCGGCCCGTCCATGCGGCGCCTGCTCGCCTTGTTTTCTCCCGCCCACCGTACCAACG
GTTCGAAAGAGGCCTGATCC

Downstream 100 bases:

>100_bases
GAGCGAGATGCTGCTGGTCCAGCTGGTGCAGTCGGTCGGCGACTATCTGCACGACGTGTTCGTGACCCAATTCGACGGTT
GGGTGGTCCTCGGTTTCGTG

Product: glycosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTSTLAGDAGTPRLSVVIAVKNEAGNVTPLIEEIDAAFKEPFELIFVNDGSTDTTPQELAAAARTRPYMRVITHANSCGK
SAGMDTGARRARGDILIMLDGDGQNNPTYLPQMVRVLDEGGPRVGMVQGERQGRKDTAFKRFQSRTANRVRRALLNDDTR
DTGCGLKVVRRHIYVALPMFDGLHRFTPALVKREGYEIRTLPVVDRARWHGVSNYGFWNRLWVGIADLLGVWWLIRRRRV
PQVVE

Sequences:

>Translated_245_residues
MTSTLAGDAGTPRLSVVIAVKNEAGNVTPLIEEIDAAFKEPFELIFVNDGSTDTTPQELAAAARTRPYMRVITHANSCGK
SAGMDTGARRARGDILIMLDGDGQNNPTYLPQMVRVLDEGGPRVGMVQGERQGRKDTAFKRFQSRTANRVRRALLNDDTR
DTGCGLKVVRRHIYVALPMFDGLHRFTPALVKREGYEIRTLPVVDRARWHGVSNYGFWNRLWVGIADLLGVWWLIRRRRV
PQVVE
>Mature_244_residues
TSTLAGDAGTPRLSVVIAVKNEAGNVTPLIEEIDAAFKEPFELIFVNDGSTDTTPQELAAAARTRPYMRVITHANSCGKS
AGMDTGARRARGDILIMLDGDGQNNPTYLPQMVRVLDEGGPRVGMVQGERQGRKDTAFKRFQSRTANRVRRALLNDDTRD
TGCGLKVVRRHIYVALPMFDGLHRFTPALVKREGYEIRTLPVVDRARWHGVSNYGFWNRLWVGIADLLGVWWLIRRRRVP
QVVE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=209, Percent_Identity=30.622009569378, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787259, Length=123, Percent_Identity=36.5853658536585, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 27429; Mature: 27298

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTLAGDAGTPRLSVVIAVKNEAGNVTPLIEEIDAAFKEPFELIFVNDGSTDTTPQELA
CCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
AAARTRPYMRVITHANSCGKSAGMDTGARRARGDILIMLDGDGQNNPTYLPQMVRVLDEG
HHHHCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCC
GPRVGMVQGERQGRKDTAFKRFQSRTANRVRRALLNDDTRDTGCGLKVVRRHIYVALPMF
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEHHH
DGLHRFTPALVKREGYEIRTLPVVDRARWHGVSNYGFWNRLWVGIADLLGVWWLIRRRRV
HHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PQVVE
CCCCC
>Mature Secondary Structure 
TSTLAGDAGTPRLSVVIAVKNEAGNVTPLIEEIDAAFKEPFELIFVNDGSTDTTPQELA
CCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
AAARTRPYMRVITHANSCGKSAGMDTGARRARGDILIMLDGDGQNNPTYLPQMVRVLDEG
HHHHCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCC
GPRVGMVQGERQGRKDTAFKRFQSRTANRVRRALLNDDTRDTGCGLKVVRRHIYVALPMF
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEHHH
DGLHRFTPALVKREGYEIRTLPVVDRARWHGVSNYGFWNRLWVGIADLLGVWWLIRRRRV
HHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PQVVE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA