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The map label for this gene is rutD [H]

Identifier: 158423011

GI number: 158423011

Start: 1569402

End: 1570220

Strand: Reverse

Name: rutD [H]

Synonym: AZC_1387

Alternate gene names: 158423011

Gene position: 1570220-1569402 (Counterclockwise)

Preceding gene: 158423012

Following gene: 158423010

Centisome position: 29.24

GC content: 66.3

Gene sequence:

>819_bases
GTGTCCTTGAATTCAGAGGTTTATTATCAGCCCACATCCGCCGGCCGGCTTGCCTGGCGCGAGGATGGTCCGGCCGGAGG
CGTGCCGCTTGTGCTGTTCCAGCGCTTTCGGGGCACGATGGACGACTGGGATCCCGCCTTCATCGCCGCGATCAGCACGG
ATCGTCGGGTCATCCGCTTCGACAGCGCCGGCATCGGCCGGTCGGGCGGCACCGTTCCCGACACGGTGAACGGCATCGCC
GCGGTGGCGGCGGAGTTCATCCGTAGCCTGAACCTCGAACAGGTCGATATTCTGGGCTGGTCCCTGGGCGGCGTGGTAGG
GCAGCAGTTCGCGCTTGACTTCCCTTATCTGGTCCGTCGCCTCATCGTGGCCGGCTCCAGCCCGGGCCCGGTGCCGGATG
GGCCGCAGCAGCACCCTCGCGTGCCGCAGATCATGACCAAGTCAGAGAACGGACCGGAGGATTTCCTGTTCCTGTTCTAC
CCCGAGACGGAAAGCGCGGTCGCCGCAGGCCGGGCCTCGCTCGCGCGCCTTGCCGCGATCCCGGATCGCGGCCCTAAAGT
GAGCGCCGCGAGCTTCATGGGGCAGGTGAAGGCGGTTTCGAGTTGGCCGGGCGTGCTACATCGAACCAAGGAACTGCGCC
TGCCCCTGCTGGTCGCCAACGGGGCGCACGACGTGATGCTGCCGGCCTATCGCTCCTACGTGCTGTCGCAGCAGGCGCCG
GATGCCAAGCTCGTGCTCTATCCGGACGCCGGCCACGCCTTCCTTTTCCAGCACATCGACGACTTCGCAGCCGAGATCGA
GCGGTTTCTTGACGAGTGA

Upstream 100 bases:

>100_bases
CGCGCGGGATGGCCTGAATTGCTGCCTTCTTGACATAGGAGACAGGAAGACGCGCGCCTAGCCTGCCACCGTCGACTGCG
GTCGAGCGAGGGAGGCACGC

Downstream 100 bases:

>100_bases
CGGGTCGCGCAGCCCTGTCCAACAGTGGGCATGGCCGGAATCTCCGCTCATTTGGCGTTCGTGAAACTCAGGTTCCCGGC
GAAGCTGCCACCCGACCCGA

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSLNSEVYYQPTSAGRLAWREDGPAGGVPLVLFQRFRGTMDDWDPAFIAAISTDRRVIRFDSAGIGRSGGTVPDTVNGIA
AVAAEFIRSLNLEQVDILGWSLGGVVGQQFALDFPYLVRRLIVAGSSPGPVPDGPQQHPRVPQIMTKSENGPEDFLFLFY
PETESAVAAGRASLARLAAIPDRGPKVSAASFMGQVKAVSSWPGVLHRTKELRLPLLVANGAHDVMLPAYRSYVLSQQAP
DAKLVLYPDAGHAFLFQHIDDFAAEIERFLDE

Sequences:

>Translated_272_residues
MSLNSEVYYQPTSAGRLAWREDGPAGGVPLVLFQRFRGTMDDWDPAFIAAISTDRRVIRFDSAGIGRSGGTVPDTVNGIA
AVAAEFIRSLNLEQVDILGWSLGGVVGQQFALDFPYLVRRLIVAGSSPGPVPDGPQQHPRVPQIMTKSENGPEDFLFLFY
PETESAVAAGRASLARLAAIPDRGPKVSAASFMGQVKAVSSWPGVLHRTKELRLPLLVANGAHDVMLPAYRSYVLSQQAP
DAKLVLYPDAGHAFLFQHIDDFAAEIERFLDE
>Mature_271_residues
SLNSEVYYQPTSAGRLAWREDGPAGGVPLVLFQRFRGTMDDWDPAFIAAISTDRRVIRFDSAGIGRSGGTVPDTVNGIAA
VAAEFIRSLNLEQVDILGWSLGGVVGQQFALDFPYLVRRLIVAGSSPGPVPDGPQQHPRVPQIMTKSENGPEDFLFLFYP
ETESAVAAGRASLARLAAIPDRGPKVSAASFMGQVKAVSSWPGVLHRTKELRLPLLVANGAHDVMLPAYRSYVLSQQAPD
AKLVLYPDAGHAFLFQHIDDFAAEIERFLDE

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29519; Mature: 29388

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNSEVYYQPTSAGRLAWREDGPAGGVPLVLFQRFRGTMDDWDPAFIAAISTDRRVIRF
CCCCCCEEECCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEE
DSAGIGRSGGTVPDTVNGIAAVAAEFIRSLNLEQVDILGWSLGGVVGQQFALDFPYLVRR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHH
LIVAGSSPGPVPDGPQQHPRVPQIMTKSENGPEDFLFLFYPETESAVAAGRASLARLAAI
HHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
PDRGPKVSAASFMGQVKAVSSWPGVLHRTKELRLPLLVANGAHDVMLPAYRSYVLSQQAP
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCC
DAKLVLYPDAGHAFLFQHIDDFAAEIERFLDE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNSEVYYQPTSAGRLAWREDGPAGGVPLVLFQRFRGTMDDWDPAFIAAISTDRRVIRF
CCCCCEEECCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEE
DSAGIGRSGGTVPDTVNGIAAVAAEFIRSLNLEQVDILGWSLGGVVGQQFALDFPYLVRR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHH
LIVAGSSPGPVPDGPQQHPRVPQIMTKSENGPEDFLFLFYPETESAVAAGRASLARLAAI
HHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCC
PDRGPKVSAASFMGQVKAVSSWPGVLHRTKELRLPLLVANGAHDVMLPAYRSYVLSQQAP
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCC
DAKLVLYPDAGHAFLFQHIDDFAAEIERFLDE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA