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The map label for this gene is nodV [H]

Identifier: 158422984

GI number: 158422984

Start: 1533976

End: 1535841

Strand: Direct

Name: nodV [H]

Synonym: AZC_1360

Alternate gene names: 158422984

Gene position: 1533976-1535841 (Clockwise)

Preceding gene: 158422976

Following gene: 158422985

Centisome position: 28.57

GC content: 66.61

Gene sequence:

>1866_bases
TTGAAGATAAGCGCGCAGCCAACAGGCGAAATTATACGTCCAATCCGCCGATTAGAACCTTGGTTTGTGAGTCCGGATTG
GGAGGCAACAGAATGGGAGATTGCGGCGCCCCGGCGCGCGGAGCGCGTCTATATCCTCAGAGGGTGCGGACATACTTTGA
TATGGGGCGAACGTTACGGAACGATCTGCATAATGGCGTTCAGGATTTCCGGCCCGCCTCCGAAGCGGCGCGGACCGGGC
TCCGGCAGGCCGCCAGCGCCGATGCTCGACAACGCCGCCTCAGGCACGCGGTCGGCGGGCGCCCGCTTGCTTCAGCAAGC
GGCGCGCCAGACCTGCCTGCATTCCAGATGGCGATTGACCGAGGACCCCATGTCCGGCCCGCGAAGTGCCTTGTTGTCCG
AACCGCCCCGCGCCTGCTCCGGTTGGCAGGGACAGGCTCTGGTGAGCGTGTTGTGCCTGGCGATCTTCCTCGTCGATACC
CTGTCGCCGCTCGATATGGCGATCGCTGTTCTTTACGTGGTCGTCGTCCTGGTTTCGTCGCGCTGGTTCCGGAGTCGGGG
CCTGATCGTCATCGGGGCGGGGTGCATTGCACTGGCGGTGACCAGCTTCCTCGTCATGCACGCCGACGATTTCAATCTCG
CCGCCGTCATGCGCTGTGTCGTGAGCATCGCGGCCATCGCCGTGACGACGCTGCTGTGCCTGCGCAATGAGGCGGCGACC
GCTTCTCTCCGCTATCAGGCCGCCTTGCTGGACCTGTCCTACGACGCCATCTTCGTGCGCGATCCCCTCGGCAGGGTCGT
TTACTGGAACGTGGGTGCCGAACGCCTTTACGGTTGGTCGCGGTCGGAAGCGACGGGGCAGGTGGCAGACGCGCTGTTGC
GCTCCGTGCTCCCGGCCCCGCGTCATGAGATCATGGGGGCGCTCGAGGCGACGGGACAGTGGGAGGGCGAGGTGATCCAT
GCCACGAGGGACGGCCGGAAAGTCACCTGCCTGAGCCGCTGGTCGCTCCAGCGCGACGACCGCGGACGCAGCCTCGGCAT
CATGGAAACGAACCACGACATCACGGGCCGCAAGACGGCCGAGAACGAGCTTCATGAGGCCCAGGCGCACCTGGCCCATG
TCACGCGGGTGAGCACCGTCGGGGAACTAACGGCCTCCATCGCGCACGAGGTCAATCAGCCATTGGCGGCGGTCGTCACC
AACGGGGAGGCCTGCCTGCGCTGGCTGCGGCGGCCCGTGCCCGACATCGGCGAGGCGGAGAAGACCGTCACCCGCATGAT
CGCGAATGCGCGCCGGGCGAGCGACGTGATCGCACGCCTGCGGGCGCTGGTGCGGCGCGGAGAACCGGATCATCTGCCAG
TCCATCTGGCGGATCTGGTGGAGGAGAGCGTCACGCTTCTGGAGCGCGAGCTGGCCAGTCACGACGTCCGGCTCGTGCTT
GAGCTCGCCCCCGACCTGCCGGAGATCCGCGGTGACCGCGTCCAACTGCTGCAGGTCCTCATCAACCTTGCCCTCAATGC
CGTCCAGGCGATGGATACGGTGCCAGAGGGACAGCGGGCCCTGACGATCCGCACCGCGCCGATGACTGACGGCCCGCAAG
GACAGGCGGAGCGTTTCGTTGCCGTGTCCGTGGAGGATACGGGGCCGGGCGCGCCGTCCGAGACGCTGGCCTCGCTTTTC
ACGCCGTTCGTCTCGACTAAGAAGGATGGCATCGGTATCGGCCTCTCCATCTCGCGCTCCATCGTCGAGGCCCATGGCGG
CCGGATTCTGGCCGAGCCTGCGCCGCAAGGCGGCCTGCGCCTGACCTTCACCCTCCCGCTCGCCGGCGATCTTCCGCCGG
CGCCCCTCAAGGAACCTCTCTCGTGA

Upstream 100 bases:

>100_bases
CAACGGCCGCACGCGCTTCGGGGCGCGCGGGACGTCCTGCGATGCTGCGAATTTCACTGTCCGCGCTCATGGCCGCCGTC
TGGTCTGATACCGGGAGGCC

Downstream 100 bases:

>100_bases
TCAGCCGTACCCAAGGCCGAAGCCCGACCCCTACTCAGGGACCCGTCGTCATCGTCGTGGACGACGACGCAGACCTGCGC
GATGCCTTGACCAGCCTGTT

Product: sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MKISAQPTGEIIRPIRRLEPWFVSPDWEATEWEIAAPRRAERVYILRGCGHTLIWGERYGTICIMAFRISGPPPKRRGPG
SGRPPAPMLDNAASGTRSAGARLLQQAARQTCLHSRWRLTEDPMSGPRSALLSEPPRACSGWQGQALVSVLCLAIFLVDT
LSPLDMAIAVLYVVVVLVSSRWFRSRGLIVIGAGCIALAVTSFLVMHADDFNLAAVMRCVVSIAAIAVTTLLCLRNEAAT
ASLRYQAALLDLSYDAIFVRDPLGRVVYWNVGAERLYGWSRSEATGQVADALLRSVLPAPRHEIMGALEATGQWEGEVIH
ATRDGRKVTCLSRWSLQRDDRGRSLGIMETNHDITGRKTAENELHEAQAHLAHVTRVSTVGELTASIAHEVNQPLAAVVT
NGEACLRWLRRPVPDIGEAEKTVTRMIANARRASDVIARLRALVRRGEPDHLPVHLADLVEESVTLLERELASHDVRLVL
ELAPDLPEIRGDRVQLLQVLINLALNAVQAMDTVPEGQRALTIRTAPMTDGPQGQAERFVAVSVEDTGPGAPSETLASLF
TPFVSTKKDGIGIGLSISRSIVEAHGGRILAEPAPQGGLRLTFTLPLAGDLPPAPLKEPLS

Sequences:

>Translated_621_residues
MKISAQPTGEIIRPIRRLEPWFVSPDWEATEWEIAAPRRAERVYILRGCGHTLIWGERYGTICIMAFRISGPPPKRRGPG
SGRPPAPMLDNAASGTRSAGARLLQQAARQTCLHSRWRLTEDPMSGPRSALLSEPPRACSGWQGQALVSVLCLAIFLVDT
LSPLDMAIAVLYVVVVLVSSRWFRSRGLIVIGAGCIALAVTSFLVMHADDFNLAAVMRCVVSIAAIAVTTLLCLRNEAAT
ASLRYQAALLDLSYDAIFVRDPLGRVVYWNVGAERLYGWSRSEATGQVADALLRSVLPAPRHEIMGALEATGQWEGEVIH
ATRDGRKVTCLSRWSLQRDDRGRSLGIMETNHDITGRKTAENELHEAQAHLAHVTRVSTVGELTASIAHEVNQPLAAVVT
NGEACLRWLRRPVPDIGEAEKTVTRMIANARRASDVIARLRALVRRGEPDHLPVHLADLVEESVTLLERELASHDVRLVL
ELAPDLPEIRGDRVQLLQVLINLALNAVQAMDTVPEGQRALTIRTAPMTDGPQGQAERFVAVSVEDTGPGAPSETLASLF
TPFVSTKKDGIGIGLSISRSIVEAHGGRILAEPAPQGGLRLTFTLPLAGDLPPAPLKEPLS
>Mature_621_residues
MKISAQPTGEIIRPIRRLEPWFVSPDWEATEWEIAAPRRAERVYILRGCGHTLIWGERYGTICIMAFRISGPPPKRRGPG
SGRPPAPMLDNAASGTRSAGARLLQQAARQTCLHSRWRLTEDPMSGPRSALLSEPPRACSGWQGQALVSVLCLAIFLVDT
LSPLDMAIAVLYVVVVLVSSRWFRSRGLIVIGAGCIALAVTSFLVMHADDFNLAAVMRCVVSIAAIAVTTLLCLRNEAAT
ASLRYQAALLDLSYDAIFVRDPLGRVVYWNVGAERLYGWSRSEATGQVADALLRSVLPAPRHEIMGALEATGQWEGEVIH
ATRDGRKVTCLSRWSLQRDDRGRSLGIMETNHDITGRKTAENELHEAQAHLAHVTRVSTVGELTASIAHEVNQPLAAVVT
NGEACLRWLRRPVPDIGEAEKTVTRMIANARRASDVIARLRALVRRGEPDHLPVHLADLVEESVTLLERELASHDVRLVL
ELAPDLPEIRGDRVQLLQVLINLALNAVQAMDTVPEGQRALTIRTAPMTDGPQGQAERFVAVSVEDTGPGAPSETLASLF
TPFVSTKKDGIGIGLSISRSIVEAHGGRILAEPAPQGGLRLTFTLPLAGDLPPAPLKEPLS

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=355, Percent_Identity=29.8591549295775, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=32.7800829875519, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1790300, Length=231, Percent_Identity=34.6320346320346, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1788393, Length=245, Percent_Identity=29.7959183673469, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87081816, Length=160, Percent_Identity=35, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=280, Percent_Identity=23.9285714285714, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI48994928, Length=392, Percent_Identity=25.2551020408163, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789149, Length=267, Percent_Identity=25.0936329588015, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 67483; Mature: 67483

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISAQPTGEIIRPIRRLEPWFVSPDWEATEWEIAAPRRAERVYILRGCGHTLIWGERYG
CCCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEECCCCCCCEEEEEECCCCEEEECCCCC
TICIMAFRISGPPPKRRGPGSGRPPAPMLDNAASGTRSAGARLLQQAARQTCLHSRWRLT
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
EDPMSGPRSALLSEPPRACSGWQGQALVSVLCLAIFLVDTLSPLDMAIAVLYVVVVLVSS
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RWFRSRGLIVIGAGCIALAVTSFLVMHADDFNLAAVMRCVVSIAAIAVTTLLCLRNEAAT
HHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ASLRYQAALLDLSYDAIFVRDPLGRVVYWNVGAERLYGWSRSEATGQVADALLRSVLPAP
HHHEEEEEEEECCCCEEEEECCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCC
RHEIMGALEATGQWEGEVIHATRDGRKVTCLSRWSLQRDDRGRSLGIMETNHDITGRKTA
HHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEECEEECCCCCCCCCCH
ENELHEAQAHLAHVTRVSTVGELTASIAHEVNQPLAAVVTNGEACLRWLRRPVPDIGEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCHHH
KTVTRMIANARRASDVIARLRALVRRGEPDHLPVHLADLVEESVTLLERELASHDVRLVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
ELAPDLPEIRGDRVQLLQVLINLALNAVQAMDTVPEGQRALTIRTAPMTDGPQGQAERFV
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEE
AVSVEDTGPGAPSETLASLFTPFVSTKKDGIGIGLSISRSIVEAHGGRILAEPAPQGGLR
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCEE
LTFTLPLAGDLPPAPLKEPLS
EEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKISAQPTGEIIRPIRRLEPWFVSPDWEATEWEIAAPRRAERVYILRGCGHTLIWGERYG
CCCCCCCCHHHHHHHHHCCCCEECCCCCCCCEEECCCCCCCEEEEEECCCCEEEECCCCC
TICIMAFRISGPPPKRRGPGSGRPPAPMLDNAASGTRSAGARLLQQAARQTCLHSRWRLT
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
EDPMSGPRSALLSEPPRACSGWQGQALVSVLCLAIFLVDTLSPLDMAIAVLYVVVVLVSS
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RWFRSRGLIVIGAGCIALAVTSFLVMHADDFNLAAVMRCVVSIAAIAVTTLLCLRNEAAT
HHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ASLRYQAALLDLSYDAIFVRDPLGRVVYWNVGAERLYGWSRSEATGQVADALLRSVLPAP
HHHEEEEEEEECCCCEEEEECCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCC
RHEIMGALEATGQWEGEVIHATRDGRKVTCLSRWSLQRDDRGRSLGIMETNHDITGRKTA
HHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEECEEECCCCCCCCCCH
ENELHEAQAHLAHVTRVSTVGELTASIAHEVNQPLAAVVTNGEACLRWLRRPVPDIGEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCHHH
KTVTRMIANARRASDVIARLRALVRRGEPDHLPVHLADLVEESVTLLERELASHDVRLVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
ELAPDLPEIRGDRVQLLQVLINLALNAVQAMDTVPEGQRALTIRTAPMTDGPQGQAERFV
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEE
AVSVEDTGPGAPSETLASLFTPFVSTKKDGIGIGLSISRSIVEAHGGRILAEPAPQGGLR
EEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCEE
LTFTLPLAGDLPPAPLKEPLS
EEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]