| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422958
Identifier: 158422958
GI number: 158422958
Start: 1498290
End: 1498985
Strand: Reverse
Name: 158422958
Synonym: AZC_1334
Alternate gene names: NA
Gene position: 1498985-1498290 (Counterclockwise)
Preceding gene: 158422959
Following gene: 158422951
Centisome position: 27.92
GC content: 65.23
Gene sequence:
>696_bases ATGGAGCGGCGAGAAAGCGCGGAGGATCTCATGCATGAGAGATACCTGAATATCACCTCCACCCCATCCGTCGAGGCCGC GCAGGAACGCTTCGGCAGCGCGGCCCAATGGGCCCGTAGCCGCGCGCGCCACTCTTTGGATGAGGCAGACCCGATCGACG GGCTCGGCGCGGCCGAGCGGGCGTTCATCGCCGCGCGCGACGGCTTCTATCTGGCGAGCGTCTCTGAGACCGGGTGGCCC TATGTGCAATATCGCGGCGGGCCGGCCGGCTTCCTGAAGGTGATGGACGAGCGCACCCTCGGATTTGCCGACTTCCGCGG AAACCGGCAGTACATCACCACCGGAAACGTCGAAGCCAACGACCGGGTCTCCCTGTTCCTGATGGATTATGCCCATCGGC AGCGGCTGAAGATCTTCGGTCACGCCCGTATCATCGACGCGGCGGACGATCCTGCGCTGACGCAGCGGCTGGCGGTTCAG GGTTATGCCGGGCGCATCGAGCGCTCCGTCCTGATCGCGGTCGAGGCCTTCGACTGGAACTGCCCGCAGCATATCACGCC GCGCTTCACCCAGTCCGAACTCGAAGCCGCACTCGCCCCTATAAGGGACGAAATGGACGCTTTGCGGCGCGAGAACGAGC GATTGCGCCATGCGGCCAACGCGAACGTGCAGCACGAGGACGATCCGCAGGCCTGA
Upstream 100 bases:
>100_bases CCCGGGCTCGGCCGCATCGTTGCCGACCGGGGCCAGATGCGCTGGCAGGTGACGGACTGGGCCTGGCAGTCCTGACAGTT CCCCCGAGAGCTCAGCCGCC
Downstream 100 bases:
>100_bases CAAAACCTGCTGAATGGCAGGTCACCCGGAAGGGCGCGGCACGCCTCGCCCGGATATGGCCTTGTGGCTCCGAACGATGC TGCGGTCAGCGGGCGCAGCG
Product: pyridoxine 5`-phosphate oxidase
Products: NA
Alternate protein names: Pyridoxine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase; Pyridoxine 5`-Phosphate Oxidase Protein; Hydrolase; Pyridoxine 5`-Phosphate Oxidase
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MERRESAEDLMHERYLNITSTPSVEAAQERFGSAAQWARSRARHSLDEADPIDGLGAAERAFIAARDGFYLASVSETGWP YVQYRGGPAGFLKVMDERTLGFADFRGNRQYITTGNVEANDRVSLFLMDYAHRQRLKIFGHARIIDAADDPALTQRLAVQ GYAGRIERSVLIAVEAFDWNCPQHITPRFTQSELEAALAPIRDEMDALRRENERLRHAANANVQHEDDPQA
Sequences:
>Translated_231_residues MERRESAEDLMHERYLNITSTPSVEAAQERFGSAAQWARSRARHSLDEADPIDGLGAAERAFIAARDGFYLASVSETGWP YVQYRGGPAGFLKVMDERTLGFADFRGNRQYITTGNVEANDRVSLFLMDYAHRQRLKIFGHARIIDAADDPALTQRLAVQ GYAGRIERSVLIAVEAFDWNCPQHITPRFTQSELEAALAPIRDEMDALRRENERLRHAANANVQHEDDPQA >Mature_231_residues MERRESAEDLMHERYLNITSTPSVEAAQERFGSAAQWARSRARHSLDEADPIDGLGAAERAFIAARDGFYLASVSETGWP YVQYRGGPAGFLKVMDERTLGFADFRGNRQYITTGNVEANDRVSLFLMDYAHRQRLKIFGHARIIDAADDPALTQRLAVQ GYAGRIERSVLIAVEAFDWNCPQHITPRFTQSELEAALAPIRDEMDALRRENERLRHAANANVQHEDDPQA
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26076; Mature: 26076
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRESAEDLMHERYLNITSTPSVEAAQERFGSAAQWARSRARHSLDEADPIDGLGAAER CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH AFIAARDGFYLASVSETGWPYVQYRGGPAGFLKVMDERTLGFADFRGNRQYITTGNVEAN EEEEECCCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCC DRVSLFLMDYAHRQRLKIFGHARIIDAADDPALTQRLAVQGYAGRIERSVLIAVEAFDWN CCEEEEEECHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHCCCEEEEEEEECCCC CPQHITPRFTQSELEAALAPIRDEMDALRRENERLRHAANANVQHEDDPQA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MERRESAEDLMHERYLNITSTPSVEAAQERFGSAAQWARSRARHSLDEADPIDGLGAAER CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH AFIAARDGFYLASVSETGWPYVQYRGGPAGFLKVMDERTLGFADFRGNRQYITTGNVEAN EEEEECCCEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCC DRVSLFLMDYAHRQRLKIFGHARIIDAADDPALTQRLAVQGYAGRIERSVLIAVEAFDWN CCEEEEEECHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHCCCEEEEEEEECCCC CPQHITPRFTQSELEAALAPIRDEMDALRRENERLRHAANANVQHEDDPQA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA