| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422934
Identifier: 158422934
GI number: 158422934
Start: 1466321
End: 1468756
Strand: Direct
Name: 158422934
Synonym: AZC_1310
Alternate gene names: NA
Gene position: 1466321-1468756 (Clockwise)
Preceding gene: 158422933
Following gene: 158422936
Centisome position: 27.31
GC content: 66.46
Gene sequence:
>2436_bases ATGTTGATGACCACTCCCGGATCGCCGCTGCCGTCTCCCGATGTGCTTCTCGAGGCGGCCAATCGGGCGGCGCGCGCCAT TCCCCCCCTTTGGCCCTTGGCCTCGAGCGTCGCGGTCAATCCCTTCCTCGGCCAGACGGGCGAGCCGCTCGCGACTGCGG CGAGCCGTCTGCGGCGGGTGGCGGGCATCCCGCTGACCATGCCGCGGTCCTGGTACGCGGACCGTTTGCGGTCCGGTGAG ATCGCCGAAGAAGATCTGCGCGCTGCCTTTGAAAGCGCTCCCGCAGCGCTTCGGCCGAAGACGTTCGCCTCATTGAAGCG GGCCGTCCAGTCTGAACGTCCAGAACCGCACGCGATCCCGACGCTCGCCGATCTGGCACGCGACGTCGCCGGGATCGACT GGCCGGCCATCGTCAATGACCGCATCAGTCACTGGGCCTCCAGCTACTTCGATGAGGGGCAGGCGCTCTGGGCCAAAGGA CAACAGGGGGCCGCTTACAGCGCATGGCGCATCATCGCGACCCACGATCTCACGCCTGAGATCGCCGGCCTGGAAGGTTT CGCACAGAGCGTTGCGGATGCGCCGGCAAATGCTGAAGACGCAATCATCGCATGCGTCGCCCGTCTTGGGCTCTGCGGGC CGGCGCTGGAAAGCTATTTCCATCGGCTTCTGACGACGCTCGGCGGCTGGAGCCAACTCGCCCGCTATCGCCTCTGGCAG GCCGAACTCACCGGCAACACCGATGCGTCCGTGACCGATCTCCTCACCATCCGCTTGATCTGGGAGGCGGCTCTGCTGCG CAAATTCGGCCCCGTGGTCGAGGCTCAATGGAAGGCTGCCATCGCTGCCTATGCCGAGCCTGTCTCTGCGACTCCTGAGG ATGTCGTGGACGCCATTCTGCAGGAGGCCGCCGAGCGCGCGGCGCAATGGCGGCTCGGCGCCTGTCTCACCGGAACATCT CCGGCCCGGGTGGCAGATGGTCGCCCCACGTTGCAGATGGCATTCTGCATCGACGTGCGCTCGGAAGTGTTTCGGCGGGC GTTGGAAAGCCTCGATCCCGGCATCCGGACGCTGGGCTTCGCGGGGTTCTTCGGGCTGGGAATCGGCCATCGGCGGTTCG GCTCGGACGTCGTGGAGGCGCGTCTGCCGGTGCTGCTGAAGCCGGGCATCTTCACATGCTCGGGAGAGGCCACGCCGGCA GTGACAAGCTCGGACCTGGCCGCGCGGATCACCGCCCGCGTCGAGCGGGCATGGGGACGCTTCAAGCTGGCCGCCATCTC CTCGTTCGCTTTCGTTGAGGCCGCAGGCCCGATCTATGTCGCCAAGCTTCTGCGCGATGGGCTGGGGCTGAAGCGGCATG CCGCGCCAAACGATCCAGCCCCGCGGCCGACCAGTGCTCTCGACCTCGACACGCGGCTGACAATGGCCGTGAGCATACTC AAGGCGATGTCGCTCACGAGAGGCTTCGCGAGGCTCGTTCTGCTCGCCGGTCACGGGGCCAATGTGGTCAACAATCCCCA TGCAAGCGCCCTGCATTGCGGCGCGTGCGGCGGGTATTCGGGCGAAGTGAATGCGCGGCTTCTTGCATCTGTGCTCAACG ACCGCGAGGTGCGCGCCGATCTTGCGGAGCGGGGCATCATCGTGCCCGAAGATACGCTGTTCCTGGCGGCGCTGCACGAC ACGACAACCGATGACGTCAACATCTACGCCGCCGACCATGCCTCTGCGGCCCATGCCGAGGATGTCGATCAGGCAGAGCG GTGGCTGAAATCGGCTGGCATTCTCGCGCGTGGGGAACGGGCGCTGCGCCTCCCTCGCGCGAAGCAGGGGCAGGACATCC CGCACCGCGCGCGCGATTGGGCCGAGCTTCGTCCCGAATGGGCGCTCGCGGGCTGCCAAGCCTTCATCGCGGCGCCGCGG GCACGGACTGCGGGGCACGATCTGGCGGGACGGGCCTTCCTCCATGACTATGACTGGCGGCGCGACGACGGCTTCGGCGT GCTGGAGTTGATCCTGACGGCGCCGGTTGTCGTCGCCAGCTGGATCAGCCTCCAATATTACGGATCGACGGTTGCGCCCG ACGTCTTCGGGGCAGGCAACAAACTCCTTCACAACGTCACCGGCGGTATCGGTGTGGTCGAGGGCAATGGCGGCCTCTTG CGGGCAGGACTGCCGTGGCAGTCAGTGCATGACGGCGAACGGCTGACGCATGAGCCCCTTCGGCTTTCCGTGCTGATCGA GGCACCGCGCGAGGCGATCGCAAGGATACTCGAACGTCACCCGGAGGTCCGGGCGCTGTTCGACAATCTCTGGCTGCATC TGTTCGCCCTCGACGACAAGGGCCGCATGGCTTGGCGCTATACCGGCGATCTTCAGTGGGAGACGTGCGTCGGCGATGAG CACGCAGATGAGCATTCCGTGCGGGAGGTCGCGTAA
Upstream 100 bases:
>100_bases CTCTCCAACGGCCTTTACGTCAACGCCACGATCGATCGCGTCCTCGGCGGCTGGTCTGTCCCCAAGGCGTCGTGAACCCA CAGGAATAAGGACAAGACCC
Downstream 100 bases:
>100_bases AGGGCGGTCCCGCGCATCCTGCGGCCTTCAAGCGCCCGAAGAAGGAGGTGCTTCGTGAGCATTGGCGAGGGAACGCCGGA CGTCACGGCCGCAGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 811; Mature: 811
Protein sequence:
>811_residues MLMTTPGSPLPSPDVLLEAANRAARAIPPLWPLASSVAVNPFLGQTGEPLATAASRLRRVAGIPLTMPRSWYADRLRSGE IAEEDLRAAFESAPAALRPKTFASLKRAVQSERPEPHAIPTLADLARDVAGIDWPAIVNDRISHWASSYFDEGQALWAKG QQGAAYSAWRIIATHDLTPEIAGLEGFAQSVADAPANAEDAIIACVARLGLCGPALESYFHRLLTTLGGWSQLARYRLWQ AELTGNTDASVTDLLTIRLIWEAALLRKFGPVVEAQWKAAIAAYAEPVSATPEDVVDAILQEAAERAAQWRLGACLTGTS PARVADGRPTLQMAFCIDVRSEVFRRALESLDPGIRTLGFAGFFGLGIGHRRFGSDVVEARLPVLLKPGIFTCSGEATPA VTSSDLAARITARVERAWGRFKLAAISSFAFVEAAGPIYVAKLLRDGLGLKRHAAPNDPAPRPTSALDLDTRLTMAVSIL KAMSLTRGFARLVLLAGHGANVVNNPHASALHCGACGGYSGEVNARLLASVLNDREVRADLAERGIIVPEDTLFLAALHD TTTDDVNIYAADHASAAHAEDVDQAERWLKSAGILARGERALRLPRAKQGQDIPHRARDWAELRPEWALAGCQAFIAAPR ARTAGHDLAGRAFLHDYDWRRDDGFGVLELILTAPVVVASWISLQYYGSTVAPDVFGAGNKLLHNVTGGIGVVEGNGGLL RAGLPWQSVHDGERLTHEPLRLSVLIEAPREAIARILERHPEVRALFDNLWLHLFALDDKGRMAWRYTGDLQWETCVGDE HADEHSVREVA
Sequences:
>Translated_811_residues MLMTTPGSPLPSPDVLLEAANRAARAIPPLWPLASSVAVNPFLGQTGEPLATAASRLRRVAGIPLTMPRSWYADRLRSGE IAEEDLRAAFESAPAALRPKTFASLKRAVQSERPEPHAIPTLADLARDVAGIDWPAIVNDRISHWASSYFDEGQALWAKG QQGAAYSAWRIIATHDLTPEIAGLEGFAQSVADAPANAEDAIIACVARLGLCGPALESYFHRLLTTLGGWSQLARYRLWQ AELTGNTDASVTDLLTIRLIWEAALLRKFGPVVEAQWKAAIAAYAEPVSATPEDVVDAILQEAAERAAQWRLGACLTGTS PARVADGRPTLQMAFCIDVRSEVFRRALESLDPGIRTLGFAGFFGLGIGHRRFGSDVVEARLPVLLKPGIFTCSGEATPA VTSSDLAARITARVERAWGRFKLAAISSFAFVEAAGPIYVAKLLRDGLGLKRHAAPNDPAPRPTSALDLDTRLTMAVSIL KAMSLTRGFARLVLLAGHGANVVNNPHASALHCGACGGYSGEVNARLLASVLNDREVRADLAERGIIVPEDTLFLAALHD TTTDDVNIYAADHASAAHAEDVDQAERWLKSAGILARGERALRLPRAKQGQDIPHRARDWAELRPEWALAGCQAFIAAPR ARTAGHDLAGRAFLHDYDWRRDDGFGVLELILTAPVVVASWISLQYYGSTVAPDVFGAGNKLLHNVTGGIGVVEGNGGLL RAGLPWQSVHDGERLTHEPLRLSVLIEAPREAIARILERHPEVRALFDNLWLHLFALDDKGRMAWRYTGDLQWETCVGDE HADEHSVREVA >Mature_811_residues MLMTTPGSPLPSPDVLLEAANRAARAIPPLWPLASSVAVNPFLGQTGEPLATAASRLRRVAGIPLTMPRSWYADRLRSGE IAEEDLRAAFESAPAALRPKTFASLKRAVQSERPEPHAIPTLADLARDVAGIDWPAIVNDRISHWASSYFDEGQALWAKG QQGAAYSAWRIIATHDLTPEIAGLEGFAQSVADAPANAEDAIIACVARLGLCGPALESYFHRLLTTLGGWSQLARYRLWQ AELTGNTDASVTDLLTIRLIWEAALLRKFGPVVEAQWKAAIAAYAEPVSATPEDVVDAILQEAAERAAQWRLGACLTGTS PARVADGRPTLQMAFCIDVRSEVFRRALESLDPGIRTLGFAGFFGLGIGHRRFGSDVVEARLPVLLKPGIFTCSGEATPA VTSSDLAARITARVERAWGRFKLAAISSFAFVEAAGPIYVAKLLRDGLGLKRHAAPNDPAPRPTSALDLDTRLTMAVSIL KAMSLTRGFARLVLLAGHGANVVNNPHASALHCGACGGYSGEVNARLLASVLNDREVRADLAERGIIVPEDTLFLAALHD TTTDDVNIYAADHASAAHAEDVDQAERWLKSAGILARGERALRLPRAKQGQDIPHRARDWAELRPEWALAGCQAFIAAPR ARTAGHDLAGRAFLHDYDWRRDDGFGVLELILTAPVVVASWISLQYYGSTVAPDVFGAGNKLLHNVTGGIGVVEGNGGLL RAGLPWQSVHDGERLTHEPLRLSVLIEAPREAIARILERHPEVRALFDNLWLHLFALDDKGRMAWRYTGDLQWETCVGDE HADEHSVREVA
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1310_AZOC5 (A8I0Y1)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001524226.1 - GeneID: 5689023 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_1310 - HOGENOM: HBG520117 - OMA: LWQAELS - ProtClustDB: CLSK924243 - BioCyc: ACAU438753:AZC_1310-MONOMER - HAMAP: MF_01871 - InterPro: IPR018752
Pfam domain/function: PF10070 DUF2309
EC number: NA
Molecular weight: Translated: 87658; Mature: 87658
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMTTPGSPLPSPDVLLEAANRAARAIPPLWPLASSVAVNPFLGQTGEPLATAASRLRRV CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHCCCCCCCCCCCHHHHHHHHHHHH AGIPLTMPRSWYADRLRSGEIAEEDLRAAFESAPAALRPKTFASLKRAVQSERPEPHAIP HCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC TLADLARDVAGIDWPAIVNDRISHWASSYFDEGQALWAKGQQGAAYSAWRIIATHDLTPE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEEECCCCCC IAGLEGFAQSVADAPANAEDAIIACVARLGLCGPALESYFHRLLTTLGGWSQLARYRLWQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AELTGNTDASVTDLLTIRLIWEAALLRKFGPVVEAQWKAAIAAYAEPVSATPEDVVDAIL EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QEAAERAAQWRLGACLTGTSPARVADGRPTLQMAFCIDVRSEVFRRALESLDPGIRTLGF HHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHH AGFFGLGIGHRRFGSDVVEARLPVLLKPGIFTCSGEATPAVTSSDLAARITARVERAWGR HHHHHCCCCHHHHCCHHHHHCCCEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC FKLAAISSFAFVEAAGPIYVAKLLRDGLGLKRHAAPNDPAPRPTSALDLDTRLTMAVSIL EEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KAMSLTRGFARLVLLAGHGANVVNNPHASALHCGACGGYSGEVNARLLASVLNDREVRAD HHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCHHHHHH LAERGIIVPEDTLFLAALHDTTTDDVNIYAADHASAAHAEDVDQAERWLKSAGILARGER HHHCCEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCH ALRLPRAKQGQDIPHRARDWAELRPEWALAGCQAFIAAPRARTAGHDLAGRAFLHDYDWR HHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC RDDGFGVLELILTAPVVVASWISLQYYGSTVAPDVFGAGNKLLHNVTGGIGVVEGNGGLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCCEEEEECCCCEE RAGLPWQSVHDGERLTHEPLRLSVLIEAPREAIARILERHPEVRALFDNLWLHLFALDDK ECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCC GRMAWRYTGDLQWETCVGDEHADEHSVREVA CCEEEEEECCCEEEECCCCCCCCHHHHHHCC >Mature Secondary Structure MLMTTPGSPLPSPDVLLEAANRAARAIPPLWPLASSVAVNPFLGQTGEPLATAASRLRRV CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHCCCCCCCCCCCHHHHHHHHHHHH AGIPLTMPRSWYADRLRSGEIAEEDLRAAFESAPAALRPKTFASLKRAVQSERPEPHAIP HCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC TLADLARDVAGIDWPAIVNDRISHWASSYFDEGQALWAKGQQGAAYSAWRIIATHDLTPE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEEECCCCCC IAGLEGFAQSVADAPANAEDAIIACVARLGLCGPALESYFHRLLTTLGGWSQLARYRLWQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AELTGNTDASVTDLLTIRLIWEAALLRKFGPVVEAQWKAAIAAYAEPVSATPEDVVDAIL EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QEAAERAAQWRLGACLTGTSPARVADGRPTLQMAFCIDVRSEVFRRALESLDPGIRTLGF HHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHH AGFFGLGIGHRRFGSDVVEARLPVLLKPGIFTCSGEATPAVTSSDLAARITARVERAWGR HHHHHCCCCHHHHCCHHHHHCCCEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC FKLAAISSFAFVEAAGPIYVAKLLRDGLGLKRHAAPNDPAPRPTSALDLDTRLTMAVSIL EEHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KAMSLTRGFARLVLLAGHGANVVNNPHASALHCGACGGYSGEVNARLLASVLNDREVRAD HHHHHHHHHHHHHEEECCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCHHHHHH LAERGIIVPEDTLFLAALHDTTTDDVNIYAADHASAAHAEDVDQAERWLKSAGILARGER HHHCCEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCH ALRLPRAKQGQDIPHRARDWAELRPEWALAGCQAFIAAPRARTAGHDLAGRAFLHDYDWR HHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC RDDGFGVLELILTAPVVVASWISLQYYGSTVAPDVFGAGNKLLHNVTGGIGVVEGNGGLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCCEEEEECCCCEE RAGLPWQSVHDGERLTHEPLRLSVLIEAPREAIARILERHPEVRALFDNLWLHLFALDDK ECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCC GRMAWRYTGDLQWETCVGDEHADEHSVREVA CCEEEEEECCCEEEECCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA