| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422855
Identifier: 158422855
GI number: 158422855
Start: 1380983
End: 1382032
Strand: Direct
Name: 158422855
Synonym: AZC_1231
Alternate gene names: NA
Gene position: 1380983-1382032 (Clockwise)
Preceding gene: 158422853
Following gene: 158422856
Centisome position: 25.72
GC content: 64.0
Gene sequence:
>1050_bases ATGAAGCGCTTGTCGTTTAAGCACGGTGCCGCCGCCTCCCTTGCCTGCCTCGCCGGCCTCCTTGGCCTCATCGGCGGCGC GCAGGCGCAGCAGACCTTCTATGTCGCCGGCTATGGCGGCACCTTCGAGCAGATCATGCGCAAGGAGATCATCCCCGCCT TCGAGAAGGCGCACGGGGTGAAGGTGGAATATGTGGCGGGCAATTCCACCGATACGCTGGCCAAGCTTCAGGCCCAGAAG GGCAATCAGCAGATCGACGTCGCCATCCTCGACGATGGCCCCATGTATCGTGCCATCAATCTCGGCTTCTGCGCGCCCAT CAAGGGCCTGCCCACGGCGGAGCTGTTCGACACCGCCCGCTTCAAGGACGACAAGGCGGTGGGCATCGGCCTCGTCGCCA CCGGCCTCATGTACAACACCAAGGTGTTCAAGGAGAAAGGCTGGGCGCCGCCCACCTCCTGGAACGACCTGAAGGACCCG AAATACAAGGGCCAGCTCGTCATTCCGCCGATCAACAACACCTATGGCCTCTATACGCTGGTGGAGTTCGCCCGCATGAA TGGCGGCGGGGAGAACGCCATCGAGCCCGGCTTCAAGGTGATGAAAACGGACGTGAACCCCAACGTGCTCGCCTATGAGC CCTCGCCGGGCAAGATGACCGAGCTGTTCCAGAGCGGGCAGGCGGTGATCGCCGTGTGGGGTTCGGGCCGCGTCGCCTCC TTCGCCGCCACCGGCTTCCCGGTGGATTTCGTCTATCCCAAGGAAGGCGCGGTGGCACTGCTCGCCTCCGCCTGTCCGGT GGGGAAAGGCGGTGACAATGCGCTCGCCAATGCCTTCGTGCAGGCGATGGTGGCACCCGAGTTCCAGGCCGTGCTCTCCA GGGAATATGGCTACGGCCCGGTCAACAAGAACGCCAAGGTGGACATGGAAGCCCTGCGCATGGCCCCTGTGGGCGAGCGG GCGGCCAAGCTGCTCGTGTTCGACTGGGACGCCATCAACCCCAAGATCGACGACTGGACGAAGCGCTGGAACCGCGAGGT GGAACGTTGA
Upstream 100 bases:
>100_bases CGCTGTATGACCATTTTGTCAGCGCGCACACAAAGACGGCAAAGGCGCGCCTGCCTTCCTTCCCGTTCCGCACGCACGTG GTTGCCACGAGGGGATTTCG
Downstream 100 bases:
>100_bases TCCTCGCGCGCACGTCCTCCAGCACGTCCGCGCCCGGCATGGCCAGCGCCTTCCTAACCCTCGATGGGCTCACCAAGCGC TATGCCGACCATGTGGCGGT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Spermidine/Putrescine ABC Transporter; TbpA Protein; ABC Transporter; Iron(III) ABC Transporter; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKRLSFKHGAAASLACLAGLLGLIGGAQAQQTFYVAGYGGTFEQIMRKEIIPAFEKAHGVKVEYVAGNSTDTLAKLQAQK GNQQIDVAILDDGPMYRAINLGFCAPIKGLPTAELFDTARFKDDKAVGIGLVATGLMYNTKVFKEKGWAPPTSWNDLKDP KYKGQLVIPPINNTYGLYTLVEFARMNGGGENAIEPGFKVMKTDVNPNVLAYEPSPGKMTELFQSGQAVIAVWGSGRVAS FAATGFPVDFVYPKEGAVALLASACPVGKGGDNALANAFVQAMVAPEFQAVLSREYGYGPVNKNAKVDMEALRMAPVGER AAKLLVFDWDAINPKIDDWTKRWNREVER
Sequences:
>Translated_349_residues MKRLSFKHGAAASLACLAGLLGLIGGAQAQQTFYVAGYGGTFEQIMRKEIIPAFEKAHGVKVEYVAGNSTDTLAKLQAQK GNQQIDVAILDDGPMYRAINLGFCAPIKGLPTAELFDTARFKDDKAVGIGLVATGLMYNTKVFKEKGWAPPTSWNDLKDP KYKGQLVIPPINNTYGLYTLVEFARMNGGGENAIEPGFKVMKTDVNPNVLAYEPSPGKMTELFQSGQAVIAVWGSGRVAS FAATGFPVDFVYPKEGAVALLASACPVGKGGDNALANAFVQAMVAPEFQAVLSREYGYGPVNKNAKVDMEALRMAPVGER AAKLLVFDWDAINPKIDDWTKRWNREVER >Mature_349_residues MKRLSFKHGAAASLACLAGLLGLIGGAQAQQTFYVAGYGGTFEQIMRKEIIPAFEKAHGVKVEYVAGNSTDTLAKLQAQK GNQQIDVAILDDGPMYRAINLGFCAPIKGLPTAELFDTARFKDDKAVGIGLVATGLMYNTKVFKEKGWAPPTSWNDLKDP KYKGQLVIPPINNTYGLYTLVEFARMNGGGENAIEPGFKVMKTDVNPNVLAYEPSPGKMTELFQSGQAVIAVWGSGRVAS FAATGFPVDFVYPKEGAVALLASACPVGKGGDNALANAFVQAMVAPEFQAVLSREYGYGPVNKNAKVDMEALRMAPVGER AAKLLVFDWDAINPKIDDWTKRWNREVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37695; Mature: 37695
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLSFKHGAAASLACLAGLLGLIGGAQAQQTFYVAGYGGTFEQIMRKEIIPAFEKAHGV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC KVEYVAGNSTDTLAKLQAQKGNQQIDVAILDDGPMYRAINLGFCAPIKGLPTAELFDTAR EEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHH FKDDKAVGIGLVATGLMYNTKVFKEKGWAPPTSWNDLKDPKYKGQLVIPPINNTYGLYTL CCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHH VEFARMNGGGENAIEPGFKVMKTDVNPNVLAYEPSPGKMTELFQSGQAVIAVWGSGRVAS HHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHCCCEEEEEECCCCEEE FAATGFPVDFVYPKEGAVALLASACPVGKGGDNALANAFVQAMVAPEFQAVLSREYGYGP EEECCCCEEEEECCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCC VNKNAKVDMEALRMAPVGERAAKLLVFDWDAINPKIDDWTKRWNREVER CCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKRLSFKHGAAASLACLAGLLGLIGGAQAQQTFYVAGYGGTFEQIMRKEIIPAFEKAHGV CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCC KVEYVAGNSTDTLAKLQAQKGNQQIDVAILDDGPMYRAINLGFCAPIKGLPTAELFDTAR EEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHH FKDDKAVGIGLVATGLMYNTKVFKEKGWAPPTSWNDLKDPKYKGQLVIPPINNTYGLYTL CCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHH VEFARMNGGGENAIEPGFKVMKTDVNPNVLAYEPSPGKMTELFQSGQAVIAVWGSGRVAS HHHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHCCCEEEEEECCCCEEE FAATGFPVDFVYPKEGAVALLASACPVGKGGDNALANAFVQAMVAPEFQAVLSREYGYGP EEECCCCEEEEECCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCC VNKNAKVDMEALRMAPVGERAAKLLVFDWDAINPKIDDWTKRWNREVER CCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA