| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is aat [H]
Identifier: 158422833
GI number: 158422833
Start: 1351579
End: 1352277
Strand: Reverse
Name: aat [H]
Synonym: AZC_1209
Alternate gene names: 158422833
Gene position: 1352277-1351579 (Counterclockwise)
Preceding gene: 158422834
Following gene: 158422828
Centisome position: 25.18
GC content: 66.52
Gene sequence:
>699_bases GTGCTGCGATATGATCGCTCCATGAGCCGACCGCGCGAGCCCTTTGTCGAGATCACGCCCGATGTCCTGCTGAAGGCCTA TGCCTGCGGGATCTTTCCCATGGCGGAAAGCGCGGACGATCCGGGACTTTACTGGATCGAGCCCGACCGGCGCGGCATCA TCCCGCTCGACGGGTTTCACATTCCCTCGCGCCTTGCCCGCACGATCCGGCAGGACAAGTTCGAGATCCGCATCGACACC GATTTCGAGGGCGTGATTTCCGGCTGCGCCACCCCGCAGGAGGGCCGCGAGAAGACCTGGATCAACCCGCGCATCCGCCG GCTCTATGGAGAGCTGTTCGATCGCGGCCAGTGCCACACGGTGGAGGCCTGGCGGGACGGCAAGCTGGTGGGCGGGCTCT ATGGCGTGGAACTCGGCGCCGCCTTCTTTGGCGAGAGCATGTTCCATTATGAGCGCGACGCCTCGAAGGTGGCGCTGGCG CATCTCGTCGCCCGGCTGAAGGTCGGCGGCTTCAAGCTGCTCGACACCCAGTTCATCACCGGCCACCTGAGCGGCTTCGG GGCGCTCGAGGTCACCCGCCGGCACTACCACCGGCTGCTGGAGGAGTCGGTCTCCGCCCGGGCCGACTTCTACTTCTGGC CGCCGGGCTTCGCCGTGCCGGGGGCGCTCTGCTTGCAGTCGGTCAGCCACACGTCATAG
Upstream 100 bases:
>100_bases GCCGGAGCCCCATTTCTCAGACGCCACGCTCGATCCGACGCGCGCCTGACCCGCACGGACGTTCCTCCCGCGGATCCTGC GGAGATTTTCACCCGCCGGG
Downstream 100 bases:
>100_bases ATCGGGTGCTCGACGCCGTGCAGGCCGGGGCTGGAAGCAAACATCCACCCGGTGAAGATGCGCTTGGCCTCGCCCTTCAG CGTGATCTCGTTCACTTCCG
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLRYDRSMSRPREPFVEITPDVLLKAYACGIFPMAESADDPGLYWIEPDRRGIIPLDGFHIPSRLARTIRQDKFEIRIDT DFEGVISGCATPQEGREKTWINPRIRRLYGELFDRGQCHTVEAWRDGKLVGGLYGVELGAAFFGESMFHYERDASKVALA HLVARLKVGGFKLLDTQFITGHLSGFGALEVTRRHYHRLLEESVSARADFYFWPPGFAVPGALCLQSVSHTS
Sequences:
>Translated_232_residues MLRYDRSMSRPREPFVEITPDVLLKAYACGIFPMAESADDPGLYWIEPDRRGIIPLDGFHIPSRLARTIRQDKFEIRIDT DFEGVISGCATPQEGREKTWINPRIRRLYGELFDRGQCHTVEAWRDGKLVGGLYGVELGAAFFGESMFHYERDASKVALA HLVARLKVGGFKLLDTQFITGHLSGFGALEVTRRHYHRLLEESVSARADFYFWPPGFAVPGALCLQSVSHTS >Mature_232_residues MLRYDRSMSRPREPFVEITPDVLLKAYACGIFPMAESADDPGLYWIEPDRRGIIPLDGFHIPSRLARTIRQDKFEIRIDT DFEGVISGCATPQEGREKTWINPRIRRLYGELFDRGQCHTVEAWRDGKLVGGLYGVELGAAFFGESMFHYERDASKVALA HLVARLKVGGFKLLDTQFITGHLSGFGALEVTRRHYHRLLEESVSARADFYFWPPGFAVPGALCLQSVSHTS
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=199, Percent_Identity=37.1859296482412, Blast_Score=127, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 26265; Mature: 26265
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYDRSMSRPREPFVEITPDVLLKAYACGIFPMAESADDPGLYWIEPDRRGIIPLDGFH CCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC IPSRLARTIRQDKFEIRIDTDFEGVISGCATPQEGREKTWINPRIRRLYGELFDRGQCHT CHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE VEAWRDGKLVGGLYGVELGAAFFGESMFHYERDASKVALAHLVARLKVGGFKLLDTQFIT EECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH GHLSGFGALEVTRRHYHRLLEESVSARADFYFWPPGFAVPGALCLQSVSHTS HHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLRYDRSMSRPREPFVEITPDVLLKAYACGIFPMAESADDPGLYWIEPDRRGIIPLDGFH CCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC IPSRLARTIRQDKFEIRIDTDFEGVISGCATPQEGREKTWINPRIRRLYGELFDRGQCHT CHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE VEAWRDGKLVGGLYGVELGAAFFGESMFHYERDASKVALAHLVARLKVGGFKLLDTQFIT EECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH GHLSGFGALEVTRRHYHRLLEESVSARADFYFWPPGFAVPGALCLQSVSHTS HHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA