Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yfhA [C]

Identifier: 158422791

GI number: 158422791

Start: 1302958

End: 1303524

Strand: Reverse

Name: yfhA [C]

Synonym: AZC_1167

Alternate gene names: 158422791

Gene position: 1303524-1302958 (Counterclockwise)

Preceding gene: 158422792

Following gene: 158422790

Centisome position: 24.28

GC content: 62.08

Gene sequence:

>567_bases
ATGGAGGTATCTATCCTTGACGATCGGGGTCCAAGCCGGTCCTCTCGGATGCATGCGAACCAACGATTCTGCCCGGAACC
GGGTACTGAATCCGTATGTGCAGAAACGATGGATCTCTCTTTGGCGACCTGCGATTTGATGGGCATGATGCCAACCCGGC
CTCACGCCTCGCCGTTCATGGGGGGCGCCCGTGTGATCGAAACGAGCCCGCTTCTCATCGTTGACGACGAGCCGGAATAT
CTCGACGAGATCCTCGAGGCGCTTGCGTTCGAGGGTGTCTCCGCCATTTCCGCATCCAACGGCATCGACGCGGTCCAGAC
CCTGCGCCGCTGCCCGGACATCCGCCTCGTGGTCACCGATATCCGCATGCCCGACATGGACGGCATCGCGCTGATGGAAG
CGGCGCGCCAGGAATTCTCCGATCGCGACCTCCAGTTCATCGTGGTCACGGGCCATGCCGCCAAGGCGGACATCGAGCGC
GCGAAAGCCGCCGGCGTGATCGATTGCCTGACGAAACCGCTGTCCATGGATGCCCTACAGCGCGCCCTCAAAGCCTTGCC
GGTGTAA

Upstream 100 bases:

>100_bases
CGGCGGGAAACTGACCTAGAGACATACCTCCCGCCCTGGCTGCATTCCCCAAAATCACGCGCGCTGATACACAAAAACCA
TCTCCGGCGATGCTTCCGTA

Downstream 100 bases:

>100_bases
TCATGCGGCTGGCCGCCACCCGGAGAGCGATCAGCGAGATATTCGACGGTTCCTATCAACTCGCCATCAATCTGTTCGTG
ATCTTCCTCCTGATCGCGGC

Product: response regulator receiver

Products: NA

Alternate protein names: Response Regulator; Response Regulator Receiver; Two-Component Response Regulator; Two Component; HD Domain Protein

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFMGGARVIETSPLLIVDDEPEY
LDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTDIRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIER
AKAAGVIDCLTKPLSMDALQRALKALPV

Sequences:

>Translated_188_residues
MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFMGGARVIETSPLLIVDDEPEY
LDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTDIRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIER
AKAAGVIDCLTKPLSMDALQRALKALPV
>Mature_188_residues
MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFMGGARVIETSPLLIVDDEPEY
LDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTDIRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIER
AKAAGVIDCLTKPLSMDALQRALKALPV

Specific function: Probable Member Of A Two-Component Regulatory System Yfha/Yfhk. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788905, Length=113, Percent_Identity=35.3982300884956, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.-

Molecular weight: Translated: 20417; Mature: 20417

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFM
CCEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGARVIETSPLLIVDDEPEYLDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTD
CCCEEEECCCEEEECCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCEEEEEE
IRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIERAKAAGVIDCLTKPLSMDALQ
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
RALKALPV
HHHHHCCC
>Mature Secondary Structure
MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFM
CCEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGARVIETSPLLIVDDEPEYLDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTD
CCCEEEECCCEEEECCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCEEEEEE
IRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIERAKAAGVIDCLTKPLSMDALQ
CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
RALKALPV
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA