| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422789
Identifier: 158422789
GI number: 158422789
Start: 1299157
End: 1300728
Strand: Reverse
Name: 158422789
Synonym: AZC_1165
Alternate gene names: NA
Gene position: 1300728-1299157 (Counterclockwise)
Preceding gene: 158422790
Following gene: 158422784
Centisome position: 24.22
GC content: 70.17
Gene sequence:
>1572_bases ATGACCGACGATCATGTGGTGGCGGACCAGAGCGCCGTCTTCGCCTTTCTGGCCGATCCCGCCAGCCATGGGGGCACCGC ACCCGTGACCCGCATCGACACTCACGGGGCGGCTGTCTTTCTGGTCGGCCCCGATGCCTACAAGGTGAAGCGGGCGGTCG CCTTCCCGTTCATGGACTTCTCCACCCTCGACAAGAGGCGGGAGGCCTGCACCGGCGAGATCGCCATCAACCGCCCCAAT GCGCCCGATCTCTACCTTTCCGCCCTGCCGGTCACCGAGCAGGACGGCCGACTGACGCTCGGCGGCGCCGGCACGCCCGT TGAGTGGGTGGTGCACATGCGCCGCTTCGACGAGGGCCAGACGCTCGACCGCGTGGCCACACGGGAGGGGCTTCCACGGG AGGTGCTCTCCGCCCTTGCCCGCGCCATCGCCGACGCCCACCGGCGTGCGCCCCTCTGCCCGCCAAGCTTCGACGCCGTG GCGGCGCTGGCCGATGTGGCCTCGGACAATGCCGCAAGCTTCCGCGCCGCGCCGGAGCTGTTCGCCCCCCCGCAGGTACA GGCGCTCGACACCGCGACGGCGGCAGCGCTGGCCGCCTGCACCGAATTGATGCGGGCGCGGGCAGACGGCGGCGATGTCC GGCGCTGCCATGGCGATCTGCACCTGCGCAACATCGCCCTCATCGACGGCCAACCGGTGCTGTTCGACGCCATCGAGTTC AATCCGGAGCTCGCCACCTGCGACGTGCTCTACGATCTCGCCTTCCTCATCATGGACCTGTGGCAGCGCGGACTGCGCCT CGAAGCCAATGGCGTACTCAACCGCTATCTGTGGGCACAGGACGAGGCGCGGCACTATGAGGCGCTCAAAGCCCTGCCGC TGTTCTTGAGCCTGCGGGCCGCCATCCGCGCGAAGGTGGGCATGGCGGCGCTGGCGCGGCTCACCGGCGAAGCACGCGCG AAGGCGGAGCAGGAGGTGCGCGCCTATTTCACGGCCGCGCTCGACTTCCTTGCCCCATCACCGCCGGTGCTGCTGGCGGT GGGCGGCCTGTCGGGCACGGGGAAAAGCCGGCTGGCGGCGCGGGCGGCACCGAGGCTGGGGCGCGCGCCGGGCGCTGTCG TCCTGCGGAGCGATGTGGAGCGCAAGAGCCTCAATGGGGTGGCGGAGACGGAGCGGCTGCCGGCAACAGGCTATTCCCCC GAGCAGACGGCGCAGGTATATGAGCGGGTGCGGCAACGGATCGATCTCGCGCTGAAGGCGGGACAGGCGGCGGTGGCGGA TGCCGTCCATGCACGCCCGGATGAGCGCGCTGCCATCCGTGCGGTAGCGGACAGGAACGCCGTGCGCTTTGTGGGGCTGT GGCTGACGGCGCCGCTCGACCTGCTGCAGGCCCGTGTCGCCCGCCGCAAGAACGACGCCTCTGACGCGACGCCTGAGGTG GTCATGAAGCAGGCCGATTACGACCTCGGCCCCATGGACTGGACGGTCGTGGATGTCTCGGAAGGGGCCGATGCCGCCCT CCACGACATCGACCGGCAGCTGAGTTCGGAGAGCGATGCGGACCGCCCGTGA
Upstream 100 bases:
>100_bases GATCGACGCAGCGACCCCACGGGGGCCTGACGGCACGTCCCATCCGGATCAAGATGGCGCCTGAAGCGCCCATGCGGCGC GAAGCGGAGAGCGAGGCGCC
Downstream 100 bases:
>100_bases GTACAGAAGACACGGCTCAGAGAGCGCTCCCGATCTCGGCTTGAGAGTCTGATCCAGTCAGGCTCTAGCAGGGCTTGTTC GGCTGGTCGGGAGAGCCGGG
Product: kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDFSTLDKRREACTGEIAINRPN APDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQTLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAV AALADVASDNAASFRAAPELFAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRAAIRAKVGMAALARLTGEARA KAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAARAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSP EQTAQVYERVRQRIDLALKAGQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP
Sequences:
>Translated_523_residues MTDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDFSTLDKRREACTGEIAINRPN APDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQTLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAV AALADVASDNAASFRAAPELFAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRAAIRAKVGMAALARLTGEARA KAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAARAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSP EQTAQVYERVRQRIDLALKAGQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP >Mature_522_residues TDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDFSTLDKRREACTGEIAINRPNA PDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQTLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAVA ALADVASDNAASFRAAPELFAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEFN PELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRAAIRAKVGMAALARLTGEARAK AEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAARAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSPE QTAQVYERVRQRIDLALKAGQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEVV MKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 56290; Mature: 56159
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDF CCCCCEECCCHHEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCCCH STLDKRREACTGEIAINRPNAPDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQ HHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC TLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAVAALADVASDNAASFRAAPEL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCC FAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEEECCCCEEEEEEEC NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRA CCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AIRAKVGMAALARLTGEARAKAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH RAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSPEQTAQVYERVRQRIDLALKA HHCCCCCCCCCCEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV CCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP HHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDF CCCCEECCCHHEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCCCH STLDKRREACTGEIAINRPNAPDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQ HHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC TLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAVAALADVASDNAASFRAAPEL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCC FAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEEECCCCEEEEEEEC NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRA CCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH AIRAKVGMAALARLTGEARAKAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH RAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSPEQTAQVYERVRQRIDLALKA HHCCCCCCCCCCEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV CCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHH VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP HHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]