Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158422789

Identifier: 158422789

GI number: 158422789

Start: 1299157

End: 1300728

Strand: Reverse

Name: 158422789

Synonym: AZC_1165

Alternate gene names: NA

Gene position: 1300728-1299157 (Counterclockwise)

Preceding gene: 158422790

Following gene: 158422784

Centisome position: 24.22

GC content: 70.17

Gene sequence:

>1572_bases
ATGACCGACGATCATGTGGTGGCGGACCAGAGCGCCGTCTTCGCCTTTCTGGCCGATCCCGCCAGCCATGGGGGCACCGC
ACCCGTGACCCGCATCGACACTCACGGGGCGGCTGTCTTTCTGGTCGGCCCCGATGCCTACAAGGTGAAGCGGGCGGTCG
CCTTCCCGTTCATGGACTTCTCCACCCTCGACAAGAGGCGGGAGGCCTGCACCGGCGAGATCGCCATCAACCGCCCCAAT
GCGCCCGATCTCTACCTTTCCGCCCTGCCGGTCACCGAGCAGGACGGCCGACTGACGCTCGGCGGCGCCGGCACGCCCGT
TGAGTGGGTGGTGCACATGCGCCGCTTCGACGAGGGCCAGACGCTCGACCGCGTGGCCACACGGGAGGGGCTTCCACGGG
AGGTGCTCTCCGCCCTTGCCCGCGCCATCGCCGACGCCCACCGGCGTGCGCCCCTCTGCCCGCCAAGCTTCGACGCCGTG
GCGGCGCTGGCCGATGTGGCCTCGGACAATGCCGCAAGCTTCCGCGCCGCGCCGGAGCTGTTCGCCCCCCCGCAGGTACA
GGCGCTCGACACCGCGACGGCGGCAGCGCTGGCCGCCTGCACCGAATTGATGCGGGCGCGGGCAGACGGCGGCGATGTCC
GGCGCTGCCATGGCGATCTGCACCTGCGCAACATCGCCCTCATCGACGGCCAACCGGTGCTGTTCGACGCCATCGAGTTC
AATCCGGAGCTCGCCACCTGCGACGTGCTCTACGATCTCGCCTTCCTCATCATGGACCTGTGGCAGCGCGGACTGCGCCT
CGAAGCCAATGGCGTACTCAACCGCTATCTGTGGGCACAGGACGAGGCGCGGCACTATGAGGCGCTCAAAGCCCTGCCGC
TGTTCTTGAGCCTGCGGGCCGCCATCCGCGCGAAGGTGGGCATGGCGGCGCTGGCGCGGCTCACCGGCGAAGCACGCGCG
AAGGCGGAGCAGGAGGTGCGCGCCTATTTCACGGCCGCGCTCGACTTCCTTGCCCCATCACCGCCGGTGCTGCTGGCGGT
GGGCGGCCTGTCGGGCACGGGGAAAAGCCGGCTGGCGGCGCGGGCGGCACCGAGGCTGGGGCGCGCGCCGGGCGCTGTCG
TCCTGCGGAGCGATGTGGAGCGCAAGAGCCTCAATGGGGTGGCGGAGACGGAGCGGCTGCCGGCAACAGGCTATTCCCCC
GAGCAGACGGCGCAGGTATATGAGCGGGTGCGGCAACGGATCGATCTCGCGCTGAAGGCGGGACAGGCGGCGGTGGCGGA
TGCCGTCCATGCACGCCCGGATGAGCGCGCTGCCATCCGTGCGGTAGCGGACAGGAACGCCGTGCGCTTTGTGGGGCTGT
GGCTGACGGCGCCGCTCGACCTGCTGCAGGCCCGTGTCGCCCGCCGCAAGAACGACGCCTCTGACGCGACGCCTGAGGTG
GTCATGAAGCAGGCCGATTACGACCTCGGCCCCATGGACTGGACGGTCGTGGATGTCTCGGAAGGGGCCGATGCCGCCCT
CCACGACATCGACCGGCAGCTGAGTTCGGAGAGCGATGCGGACCGCCCGTGA

Upstream 100 bases:

>100_bases
GATCGACGCAGCGACCCCACGGGGGCCTGACGGCACGTCCCATCCGGATCAAGATGGCGCCTGAAGCGCCCATGCGGCGC
GAAGCGGAGAGCGAGGCGCC

Downstream 100 bases:

>100_bases
GTACAGAAGACACGGCTCAGAGAGCGCTCCCGATCTCGGCTTGAGAGTCTGATCCAGTCAGGCTCTAGCAGGGCTTGTTC
GGCTGGTCGGGAGAGCCGGG

Product: kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MTDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDFSTLDKRREACTGEIAINRPN
APDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQTLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAV
AALADVASDNAASFRAAPELFAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF
NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRAAIRAKVGMAALARLTGEARA
KAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAARAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSP
EQTAQVYERVRQRIDLALKAGQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV
VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP

Sequences:

>Translated_523_residues
MTDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDFSTLDKRREACTGEIAINRPN
APDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQTLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAV
AALADVASDNAASFRAAPELFAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF
NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRAAIRAKVGMAALARLTGEARA
KAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAARAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSP
EQTAQVYERVRQRIDLALKAGQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV
VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP
>Mature_522_residues
TDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDFSTLDKRREACTGEIAINRPNA
PDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQTLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAVA
ALADVASDNAASFRAAPELFAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEFN
PELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRAAIRAKVGMAALARLTGEARAK
AEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAARAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSPE
QTAQVYERVRQRIDLALKAGQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEVV
MKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 56290; Mature: 56159

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDF
CCCCCEECCCHHEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCCCH
STLDKRREACTGEIAINRPNAPDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQ
HHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC
TLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAVAALADVASDNAASFRAAPEL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCC
FAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEEECCCCEEEEEEEC
NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRA
CCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AIRAKVGMAALARLTGEARAKAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH
RAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSPEQTAQVYERVRQRIDLALKA
HHCCCCCCCCCCEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV
CCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP
HHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDDHVVADQSAVFAFLADPASHGGTAPVTRIDTHGAAVFLVGPDAYKVKRAVAFPFMDF
CCCCEECCCHHEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHCCCCCH
STLDKRREACTGEIAINRPNAPDLYLSALPVTEQDGRLTLGGAGTPVEWVVHMRRFDEGQ
HHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHCCCCC
TLDRVATREGLPREVLSALARAIADAHRRAPLCPPSFDAVAALADVASDNAASFRAAPEL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCC
FAPPQVQALDTATAAALAACTELMRARADGGDVRRCHGDLHLRNIALIDGQPVLFDAIEF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEEECCCCEEEEEEEC
NPELATCDVLYDLAFLIMDLWQRGLRLEANGVLNRYLWAQDEARHYEALKALPLFLSLRA
CCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AIRAKVGMAALARLTGEARAKAEQEVRAYFTAALDFLAPSPPVLLAVGGLSGTGKSRLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH
RAAPRLGRAPGAVVLRSDVERKSLNGVAETERLPATGYSPEQTAQVYERVRQRIDLALKA
HHCCCCCCCCCCEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GQAAVADAVHARPDERAAIRAVADRNAVRFVGLWLTAPLDLLQARVARRKNDASDATPEV
CCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
VMKQADYDLGPMDWTVVDVSEGADAALHDIDRQLSSESDADRP
HHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]