| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fdoG [H]
Identifier: 158422783
GI number: 158422783
Start: 1292107
End: 1294581
Strand: Reverse
Name: fdoG [H]
Synonym: AZC_1159
Alternate gene names: 158422783
Gene position: 1294581-1292107 (Counterclockwise)
Preceding gene: 158422784
Following gene: 158422782
Centisome position: 24.11
GC content: 63.31
Gene sequence:
>2475_bases GTGTCCAGTTTGGGCCCAACTTTTGGCCGTGGCGCGATGACCAATTCGTGGACCGATATTCGGAACACGGATCTTGTCGT GATCATGGGCGGCAATGCCGCCGAAGCACATCCTTGCGGTTTCAAGTGGGTCGTGGAGGCGAAGGCCAACCGCGGCGCGA AGCTTGTCGTCGTTGATCCGCGCTTCACGCGGTCCGCGGCGGTCGCCGACTATTACGCCCCCATCCGTCAGGGCTCCGAC ATCGCCTTCCTGCTCGGCGTGATCAATTACTGCATCCAGAACAACAAGGTGCAGTGGGATTACGTCAAAGCCTTCACCAA CGCGACGTACCTCGTGAAGGACGGCTTCGAGTATCGGGACGGCCTGTTCACGGGCTATGACGAGGAGAAGCGCGACTACA ACCGCTCCACCTGGGATTACCAGATCGGCCCCGATGGCTATGCCATGGTGGACGAGACGCTGGAGAATCCGCGCTGCGTC TGGAACCTGCTCAAGGCCCACGTCGCCCAGTACACGCCCGAAATGGTCGAGCGCATCAGCGGCACGCCGAAGGACAAGTT CCTGAAGGTCGCCGCCATGATCGCGGAGTGCTCATCGCCCACCAAGACGATGACCTCCATGTACGCGCTCGGCTGGACCC AGCACTCCAAGGGCTCGCAGAACATCCGCTGCATGGCGATGCTCCAGCTCATCCTGGGCAACATCGGCGTGCGCGGCGGC GGCATGAACGCCCTGCGTGGTCACTCCAACATCCAGGGCCTCACCGACATCGGCCTGATGTCGAACATGATCCCCGGCTA CCTGAACCTGCCCACGGAACGGGAACCGGACTTCGCCACCTACATGTCGACCCGCGGCTTCAAGCCGTTGCGGCCGAACC AGATGAGCTACTGGCAGAACTACAAGAAGTTCATGGTGAGCTTCCTGAAGTCCATGTGGGGCCCGGCGGCGACCGCGGAG AACAACTTCGCGTTCGACTGGCTGCCCAAGCTGGATGTCCCGACCTACGACATCCTGCGCGCGTTCGAGCTCATGAAGCA GGGGAAGATGAACCTCTACTTCTGCCAGGGCTTCAACCCGCTGCAGGCGTTCCCCAACCGGAACAAGCTGTCGGCGGCGC TGTCCAGGCTGAAGATGCTGGTCATCATGGACCCGCTGGAAACGGAGACCGCCCGTTTCTGGGAAAACCACGGCGTCTAT AACGACGTCGATCCCTCCAAGATCCAGACCGAGGTCATCCAGCTCCCCACCACCTGCTTTGCGGAGGATGAGGGCTCGCT GGTGAACTCCGGCCGCTGGCTCCAGTGGCACTGGCCGGCCGGCTCGCCTCCGGGCGAGGCGCGCACCGACGCCTGGATCA TGTCGCAGATCCATCTGCGGCTGAAGGAGATGTACCGGAAGGAAGGCGGGGCCCTGCCGGACCCCATCGTCAACCTCTCC TGGACCTACAAGAACCCGGACGAGCCGACGCCCGAGGAGCTCACCAAGGAGCTCAACGGCTATGTGGTCTCCGACGTGCT GGATCCGAACGATCCCACCAAGAAGCTGCTGACCGCCGGCAAGCAGGTGCCGAACTTCGGCGTGCTGCGCGACGACGGTT CCACGGCTGCGGGCTGCTGGATCTACTCCGGCTCCTTCACCGAGGACGGCAACATGATGGCCCGTCGGGACAATTCCGAT CCCGACAACACCGGAGCGTATCTGAAGTGGTCGTTCGCCTGGCCGGCGAACCGCCGCATCATCTACAACCGCGCCTCCGC CGACATCAACGGCAAGCCGTGGGATGACACCCGCAAGCTGCTGTGGTGGGACGGGGCCAAGTGGACCGGCTACGACGTGC CCGACATCGCCCCCACGGCGAAGCCGCAGGACGTCGGCCCCTTCATCATGAACCCGGAAGGCGTGTCCCGCCTGTTCGCC CGGGGCATGATGCGCGACGGTCCCTTCCCGGTGCATTACGAGCCGTTCGAGAGCCCGCTGGTCAATGTGATCGCCCCCAA GGTGCGGGGCAATCCGGTGGCGCGCGTGTTCAAGGACGACTTCGCCCAGTTCGCGGAGCCGGCGTCGAAGGAGTTCCCCT ATGCGGCGACCTCCTATCGTCTCACGGAGCACTTCCACTACTGGACCAAGAACAACCATGTGAACTCGGTCCTGCAGCCG GAATTCTTCGTGGAGATCTCGGAAGAGCTCGCGAAGGAGAAGTCCATCAACAATGGCGGCTGGGTGCGCGTGTGGTCCAA GCGCGGCTCGGTGTTTGCCAAGGCCTATGTGACGAAGCGCATCCGTCCGCTCATCTGCGACGGCAAGCCGGTGCACGTGG TCGGCATCCCGATCCACTGGGGCTTCGTGGGCGCGGCCAAGAAGGGCTTCCCCGCGAACGTGCTCACCCCGTTCGTCGGT GACGCGAACATCGAGACGCCGGAGTTCAAGGCGTTTCTGGTCAATATCGAGCCCACGACCGGGCCGGTGGCGTGA
Upstream 100 bases:
>100_bases TGCAACGACGAACGAGACCGCCTGGGCGACCTACAAGGTCGTTCGCAGTCTCGGCATGGTGGTTTTCGACAATCAGGCGC GCGTCTGACACGGCCCCACG
Downstream 100 bases:
>100_bases GGGAGGGTCGAACCATGTTGCAACCAGCACCGAACCCTCCGGTCGCCCCCACCCCGGCGAAGTTCTCGGACCAGGATCTG CTGCGGAAGTCGGCGTCCAC
Product: formate dehydrogenase subunit alpha
Products: NA
Alternate protein names: Aerobic formate dehydrogenase major subunit; FDH-Z subunit alpha; Formate dehydrogenase-O subunit alpha [H]
Number of amino acids: Translated: 824; Mature: 823
Protein sequence:
>824_residues MSSLGPTFGRGAMTNSWTDIRNTDLVVIMGGNAAEAHPCGFKWVVEAKANRGAKLVVVDPRFTRSAAVADYYAPIRQGSD IAFLLGVINYCIQNNKVQWDYVKAFTNATYLVKDGFEYRDGLFTGYDEEKRDYNRSTWDYQIGPDGYAMVDETLENPRCV WNLLKAHVAQYTPEMVERISGTPKDKFLKVAAMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGG GMNALRGHSNIQGLTDIGLMSNMIPGYLNLPTEREPDFATYMSTRGFKPLRPNQMSYWQNYKKFMVSFLKSMWGPAATAE NNFAFDWLPKLDVPTYDILRAFELMKQGKMNLYFCQGFNPLQAFPNRNKLSAALSRLKMLVIMDPLETETARFWENHGVY NDVDPSKIQTEVIQLPTTCFAEDEGSLVNSGRWLQWHWPAGSPPGEARTDAWIMSQIHLRLKEMYRKEGGALPDPIVNLS WTYKNPDEPTPEELTKELNGYVVSDVLDPNDPTKKLLTAGKQVPNFGVLRDDGSTAAGCWIYSGSFTEDGNMMARRDNSD PDNTGAYLKWSFAWPANRRIIYNRASADINGKPWDDTRKLLWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFA RGMMRDGPFPVHYEPFESPLVNVIAPKVRGNPVARVFKDDFAQFAEPASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQP EFFVEISEELAKEKSINNGGWVRVWSKRGSVFAKAYVTKRIRPLICDGKPVHVVGIPIHWGFVGAAKKGFPANVLTPFVG DANIETPEFKAFLVNIEPTTGPVA
Sequences:
>Translated_824_residues MSSLGPTFGRGAMTNSWTDIRNTDLVVIMGGNAAEAHPCGFKWVVEAKANRGAKLVVVDPRFTRSAAVADYYAPIRQGSD IAFLLGVINYCIQNNKVQWDYVKAFTNATYLVKDGFEYRDGLFTGYDEEKRDYNRSTWDYQIGPDGYAMVDETLENPRCV WNLLKAHVAQYTPEMVERISGTPKDKFLKVAAMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGG GMNALRGHSNIQGLTDIGLMSNMIPGYLNLPTEREPDFATYMSTRGFKPLRPNQMSYWQNYKKFMVSFLKSMWGPAATAE NNFAFDWLPKLDVPTYDILRAFELMKQGKMNLYFCQGFNPLQAFPNRNKLSAALSRLKMLVIMDPLETETARFWENHGVY NDVDPSKIQTEVIQLPTTCFAEDEGSLVNSGRWLQWHWPAGSPPGEARTDAWIMSQIHLRLKEMYRKEGGALPDPIVNLS WTYKNPDEPTPEELTKELNGYVVSDVLDPNDPTKKLLTAGKQVPNFGVLRDDGSTAAGCWIYSGSFTEDGNMMARRDNSD PDNTGAYLKWSFAWPANRRIIYNRASADINGKPWDDTRKLLWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFA RGMMRDGPFPVHYEPFESPLVNVIAPKVRGNPVARVFKDDFAQFAEPASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQP EFFVEISEELAKEKSINNGGWVRVWSKRGSVFAKAYVTKRIRPLICDGKPVHVVGIPIHWGFVGAAKKGFPANVLTPFVG DANIETPEFKAFLVNIEPTTGPVA >Mature_823_residues SSLGPTFGRGAMTNSWTDIRNTDLVVIMGGNAAEAHPCGFKWVVEAKANRGAKLVVVDPRFTRSAAVADYYAPIRQGSDI AFLLGVINYCIQNNKVQWDYVKAFTNATYLVKDGFEYRDGLFTGYDEEKRDYNRSTWDYQIGPDGYAMVDETLENPRCVW NLLKAHVAQYTPEMVERISGTPKDKFLKVAAMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGGG MNALRGHSNIQGLTDIGLMSNMIPGYLNLPTEREPDFATYMSTRGFKPLRPNQMSYWQNYKKFMVSFLKSMWGPAATAEN NFAFDWLPKLDVPTYDILRAFELMKQGKMNLYFCQGFNPLQAFPNRNKLSAALSRLKMLVIMDPLETETARFWENHGVYN DVDPSKIQTEVIQLPTTCFAEDEGSLVNSGRWLQWHWPAGSPPGEARTDAWIMSQIHLRLKEMYRKEGGALPDPIVNLSW TYKNPDEPTPEELTKELNGYVVSDVLDPNDPTKKLLTAGKQVPNFGVLRDDGSTAAGCWIYSGSFTEDGNMMARRDNSDP DNTGAYLKWSFAWPANRRIIYNRASADINGKPWDDTRKLLWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFAR GMMRDGPFPVHYEPFESPLVNVIAPKVRGNPVARVFKDDFAQFAEPASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQPE FFVEISEELAKEKSINNGGWVRVWSKRGSVFAKAYVTKRIRPLICDGKPVHVVGIPIHWGFVGAAKKGFPANVLTPFVGD ANIETPEFKAFLVNIEPTTGPVA
Specific function: Allows to use formate as major electron donor during aerobic respiration. Subunit alpha possibly forms the active site [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868720, Length=818, Percent_Identity=58.9242053789731, Blast_Score=1031, Evalue=0.0, Organism=Escherichia coli, GI3868719, Length=818, Percent_Identity=57.7017114914425, Blast_Score=1016, Evalue=0.0, Organism=Escherichia coli, GI3868721, Length=464, Percent_Identity=25.8620689655172, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI1788534, Length=460, Percent_Identity=24.7826086956522, Blast_Score=105, Evalue=2e-23, Organism=Escherichia coli, GI87081797, Length=256, Percent_Identity=27.34375, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI171474008, Length=245, Percent_Identity=27.7551020408163, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006443 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.2.1.2 [H]
Molecular weight: Translated: 92746; Mature: 92615
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLGPTFGRGAMTNSWTDIRNTDLVVIMGGNAAEAHPCGFKWVVEAKANRGAKLVVVDP CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECC RFTRSAAVADYYAPIRQGSDIAFLLGVINYCIQNNKVQWDYVKAFTNATYLVKDGFEYRD CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCC GLFTGYDEEKRDYNRSTWDYQIGPDGYAMVDETLENPRCVWNLLKAHVAQYTPEMVERIS CCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHC GTPKDKFLKVAAMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC GMNALRGHSNIQGLTDIGLMSNMIPGYLNLPTEREPDFATYMSTRGFKPLRPNQMSYWQN CCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHH YKKFMVSFLKSMWGPAATAENNFAFDWLPKLDVPTYDILRAFELMKQGKMNLYFCQGFNP HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCH LQAFPNRNKLSAALSRLKMLVIMDPLETETARFWENHGVYNDVDPSKIQTEVIQLPTTCF HHHCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEE AEDEGSLVNSGRWLQWHWPAGSPPGEARTDAWIMSQIHLRLKEMYRKEGGALPDPIVNLS ECCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE WTYKNPDEPTPEELTKELNGYVVSDVLDPNDPTKKLLTAGKQVPNFGVLRDDGSTAAGCW EEECCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEE IYSGSFTEDGNMMARRDNSDPDNTGAYLKWSFAWPANRRIIYNRASADINGKPWDDTRKL EEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEE LWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFARGMMRDGPFPVHYEPFESPL EEECCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCH VNVIAPKVRGNPVARVFKDDFAQFAEPASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQP HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHEEEECCCCCCCCCCCC EFFVEISEELAKEKSINNGGWVRVWSKRGSVFAKAYVTKRIRPLICDGKPVHVVGIPIHW HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHCCCEEEECCCEEEEEEEEEEE GFVGAAKKGFPANVLTPFVGDANIETPEFKAFLVNIEPTTGPVA CEECCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure SSLGPTFGRGAMTNSWTDIRNTDLVVIMGGNAAEAHPCGFKWVVEAKANRGAKLVVVDP CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEECC RFTRSAAVADYYAPIRQGSDIAFLLGVINYCIQNNKVQWDYVKAFTNATYLVKDGFEYRD CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCCC GLFTGYDEEKRDYNRSTWDYQIGPDGYAMVDETLENPRCVWNLLKAHVAQYTPEMVERIS CCCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHC GTPKDKFLKVAAMIAECSSPTKTMTSMYALGWTQHSKGSQNIRCMAMLQLILGNIGVRGG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC GMNALRGHSNIQGLTDIGLMSNMIPGYLNLPTEREPDFATYMSTRGFKPLRPNQMSYWQN CCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHH YKKFMVSFLKSMWGPAATAENNFAFDWLPKLDVPTYDILRAFELMKQGKMNLYFCQGFNP HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCH LQAFPNRNKLSAALSRLKMLVIMDPLETETARFWENHGVYNDVDPSKIQTEVIQLPTTCF HHHCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEE AEDEGSLVNSGRWLQWHWPAGSPPGEARTDAWIMSQIHLRLKEMYRKEGGALPDPIVNLS ECCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE WTYKNPDEPTPEELTKELNGYVVSDVLDPNDPTKKLLTAGKQVPNFGVLRDDGSTAAGCW EEECCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEE IYSGSFTEDGNMMARRDNSDPDNTGAYLKWSFAWPANRRIIYNRASADINGKPWDDTRKL EEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEE LWWDGAKWTGYDVPDIAPTAKPQDVGPFIMNPEGVSRLFARGMMRDGPFPVHYEPFESPL EEECCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCH VNVIAPKVRGNPVARVFKDDFAQFAEPASKEFPYAATSYRLTEHFHYWTKNNHVNSVLQP HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHEEHHHHEEEECCCCCCCCCCCC EFFVEISEELAKEKSINNGGWVRVWSKRGSVFAKAYVTKRIRPLICDGKPVHVVGIPIHW HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHCCCEEEECCCEEEEEEEEEEE GFVGAAKKGFPANVLTPFVGDANIETPEFKAFLVNIEPTTGPVA CEECCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503; 8522521 [H]