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The map label for this gene is ybeQ [H]

Identifier: 158422778

GI number: 158422778

Start: 1287095

End: 1287892

Strand: Reverse

Name: ybeQ [H]

Synonym: AZC_1154

Alternate gene names: 158422778

Gene position: 1287892-1287095 (Counterclockwise)

Preceding gene: 158422779

Following gene: 158422777

Centisome position: 23.98

GC content: 72.93

Gene sequence:

>798_bases
ATGGGCCTGTTCGATTTTCTCCGCCGCCCCGCCCCCTGCCCGCCCCCGAGCGAGAGCGTGGAGGCGCGCATGGGCCGCGC
CCTCGATGCCGCCGCGAGCGGCGATTATGAGGGCGCGCTGGCGCTCTGGGAGCCGCTGGCGCGCGAAGGCATCGCCCGCG
CCCAGAACAATATCGGCGCCTGCTTCGCCGAGGGGCTCGGCGTCGCCCGCGATCCCGAGATGGCGCAGAAGTGGCTGAGC
CTGTCGGCCCAGTCGGGCGATCCGGTGGGCCAGCGCAATCTCGCTGCCCTCTATTTCAAGGGCGAGGGCGTGCCGCAGGA
TTACGTCCACGCCGCCGAGCTTTATGGCGCCGCCGCCGCGCAGGGCGATGCCCCGGCGCAGGACATGCTGAGCTGGATGC
TGCTCGAGGGCGAAGTCATCCCGGCCGATGTGGCGGAAGCCCGCCGCTGGGCGGAAGCCGCCGCCGAACAGGGCGTCGCC
TCCTCCATGACCCGCATGGGGATGCTCTATCACAACGCGCTGGGCGTCGAGCGCGATGCCGCCGAGGCGGCCCGCTGGTG
GCAGAAGGGCGCCGAGGGAGACGATGCGGACGGGCAGGCCATGCTGGGCGCCGCCTATCACATCGGCTCCGGCGTGCCGC
GCGATCCCGTCGCCGCTTATGCCTGGCTGCTGCGCGCACAGGCCGGCGGCAGCCAGCTTGCCGCCCCCTTCATGACCAGC
GCGCGCGAGGCGCTTTCGCCCGATCAGCAGGCCGAAGCGGAACGCATCGCGGCGGCGCCACTGCCCGGCGCGGGCTGA

Upstream 100 bases:

>100_bases
TCGTCGGGCGCGTGGAAGACGGCGCGCTGCTGCTGGACCTGCGCTGCCTGGAGGATGAGGCGGGCTTTGCCGCCAGCCTC
GCGCATCTGGAGCCTGCCTG

Downstream 100 bases:

>100_bases
GCACCATGATCATCGGCACAGCAGGACATATCGACCACGGCAAGACCTCGCTGGTGCGGGCGATCACCGGCGTCGATACG
GACCGGCTGAAGGAGGAGAA

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGLFDFLRRPAPCPPPSESVEARMGRALDAAASGDYEGALALWEPLAREGIARAQNNIGACFAEGLGVARDPEMAQKWLS
LSAQSGDPVGQRNLAALYFKGEGVPQDYVHAAELYGAAAAQGDAPAQDMLSWMLLEGEVIPADVAEARRWAEAAAEQGVA
SSMTRMGMLYHNALGVERDAAEAARWWQKGAEGDDADGQAMLGAAYHIGSGVPRDPVAAYAWLLRAQAGGSQLAAPFMTS
AREALSPDQQAEAERIAAAPLPGAG

Sequences:

>Translated_265_residues
MGLFDFLRRPAPCPPPSESVEARMGRALDAAASGDYEGALALWEPLAREGIARAQNNIGACFAEGLGVARDPEMAQKWLS
LSAQSGDPVGQRNLAALYFKGEGVPQDYVHAAELYGAAAAQGDAPAQDMLSWMLLEGEVIPADVAEARRWAEAAAEQGVA
SSMTRMGMLYHNALGVERDAAEAARWWQKGAEGDDADGQAMLGAAYHIGSGVPRDPVAAYAWLLRAQAGGSQLAAPFMTS
AREALSPDQQAEAERIAAAPLPGAG
>Mature_264_residues
GLFDFLRRPAPCPPPSESVEARMGRALDAAASGDYEGALALWEPLAREGIARAQNNIGACFAEGLGVARDPEMAQKWLSL
SAQSGDPVGQRNLAALYFKGEGVPQDYVHAAELYGAAAAQGDAPAQDMLSWMLLEGEVIPADVAEARRWAEAAAEQGVAS
SMTRMGMLYHNALGVERDAAEAARWWQKGAEGDDADGQAMLGAAYHIGSGVPRDPVAAYAWLLRAQAGGSQLAAPFMTSA
REALSPDQQAEAERIAAAPLPGAG

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=164, Percent_Identity=32.9268292682927, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI19923669, Length=160, Percent_Identity=31.875, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87081769, Length=209, Percent_Identity=34.4497607655502, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1786867, Length=123, Percent_Identity=31.7073170731707, Blast_Score=69, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21355295, Length=159, Percent_Identity=32.7044025157233, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27763; Mature: 27632

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDFLRRPAPCPPPSESVEARMGRALDAAASGDYEGALALWEPLAREGIARAQNNIGA
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CFAEGLGVARDPEMAQKWLSLSAQSGDPVGQRNLAALYFKGEGVPQDYVHAAELYGAAAA
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
QGDAPAQDMLSWMLLEGEVIPADVAEARRWAEAAAEQGVASSMTRMGMLYHNALGVERDA
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AEAARWWQKGAEGDDADGQAMLGAAYHIGSGVPRDPVAAYAWLLRAQAGGSQLAAPFMTS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
AREALSPDQQAEAERIAAAPLPGAG
HHHHCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLFDFLRRPAPCPPPSESVEARMGRALDAAASGDYEGALALWEPLAREGIARAQNNIGA
CHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CFAEGLGVARDPEMAQKWLSLSAQSGDPVGQRNLAALYFKGEGVPQDYVHAAELYGAAAA
HHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC
QGDAPAQDMLSWMLLEGEVIPADVAEARRWAEAAAEQGVASSMTRMGMLYHNALGVERDA
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AEAARWWQKGAEGDDADGQAMLGAAYHIGSGVPRDPVAAYAWLLRAQAGGSQLAAPFMTS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
AREALSPDQQAEAERIAAAPLPGAG
HHHHCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]