Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is yaaU [H]

Identifier: 158422765

GI number: 158422765

Start: 1271403

End: 1272926

Strand: Reverse

Name: yaaU [H]

Synonym: AZC_1141

Alternate gene names: 158422765

Gene position: 1272926-1271403 (Counterclockwise)

Preceding gene: 158422768

Following gene: 158422762

Centisome position: 23.71

GC content: 67.91

Gene sequence:

>1524_bases
ATGCGTACCGAAACCAGCGACAGCGCCCACAGCCACGCCACACGGCCGCACGGCCAGTCCCTGCACGGCACGCCCGAGGA
CGTGCAGCGGGTGCAGGACTATATCGACGAGACGCCCATCTGGCGCGACGGCACGGTCGTTCCGGCGGCGCCCATGACGG
CCATGCAGTGGCGGATCTGGAGCCTCGCCGCCGCCGGCAAGTTCTTCGAGGGTCTCGTCGTGTTCATGACCGGCGTCGCC
CTGCCGCTCATGGGCGCCGAGTTCGGCATGACGCCGCTCCAGCATGGCCTCGTCAGCGCCGCCACCCTGTTCGGCATCCT
CGTGGGTGCGCTGGCGCTGGGCGGCCTTGCCGACCAGTTCGGCCGCAAGCCCATGTTCGTGTTCGAGATGGCGCTGTTCA
TCCTGTTTCTCGGCCTGCTCGCCGCAGCGCCGAATTTCAGCTGGATGCTCATCTTCCTCTTCGGCATCGGTCTGGCGCTC
GGCTGCGATTATCCGACAGCCCATCTCGTCATCTCGGAAAGCATCCCGAGTTCCTCGCGCGGCCGGCTCGTGCTCGGCGC
CTTCTCCTTCCAGGCGCTGGGCGCGCTCAGCGGAACGGCCGTCGGCTATCTGGTGCTCGTCTTCGATCCGACCCTCAGCG
CCTGGCGGCTCATGTACGCCGTGGCCATCGTCCCCGCGCTGATCGTGCTCGCCGGCCGCTTCTTCATCACCGAGAGCAGC
CACTGGCTGCTGGCGAAGGGCCGGGTGCCGGAGGCCGAGCACAATCTCAAGCGGCTGCTGACCCGCCAGCCGCGCTACCC
CAAGCACATCCGTCTCAAGGGCCTGCACGAGCCCGGCCTCGCCCGACCGGAAAGCCACCTTCTGGTGCTGTTCCGCCGCA
AGAACCTGCGGGCGACGCTGTTCGCCTCCCTGCCGTGGTTCCTTCAGGACCTCGGCACCTACGGCATCGGCATCTTCACC
CCCACCATCCTTGCCGCCGCACTGGGGGCCGACACCTCCATCCGCATGCCCGGTGTCGCCGGTCTCATTGCGGGTGACAT
GCGCGCCGCCCAGGGCGCGGCCTTCATCGACATCCTTCTGATCGTCGGCATGGTGGCGGCAGTGATGCTGGCGGACAAGG
TGGGCCGCGTGCTGTTGCAGGTGTTCGGCTTCCTCGGCTGCGCCGCCGGCCTGCTGCTCGCCTCGTTCCACGACGCCTTC
ACCGGCCCGGCGCAGATCGCGCTCATCTATGCCGGCTTCATGCTTTTCAACTTCATGTGCAACATGGGCCCCAACGCCCA
GACCTACCTGCTGGCAGGCGAGGTGTTTCCCACCCACATCCGCGGGATCGGGGCGGGCTTTGCCGCCGCCTTCGGCAAGG
TGGGGGCGGTGCTGACCGCCTTCCTCTTCCCCATCCTGCTCAGCACGCTCGGCACGTCGAACCTGCTCTACATGCTGGTG
GCGACCTCGCTCCTCGGGGCGCTCATCACCTGGCTGCTGCGGATCGAGACCAAGGGCCGCCGGCTCGACGACGTGGGCCT
GTGA

Upstream 100 bases:

>100_bases
TCCCACGCATGCTTATGGTTTAGAAGCGCGATTAGGTAAGCTGTGACCGTCACACGCCGTTCATGGGTGACGGAGAGGGT
GCGGGCCGCGGAGATCGAGC

Downstream 100 bases:

>100_bases
CGGCGCGCGGGGACATCCCGCGCGCCGTCGATCTCTCGAAAACGATGGAAGTTTCGCGCCTCAGCCCCAGCGCTCGCCGA
CCACCTGCCAGTTCACGCGG

Product: glucose transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIWSLAAAGKFFEGLVVFMTGVA
LPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQFGRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLAL
GCDYPTAHLVISESIPSSSRGRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS
HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATLFASLPWFLQDLGTYGIGIFT
PTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILLIVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAF
TGPAQIALIYAGFMLFNFMCNMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV
ATSLLGALITWLLRIETKGRRLDDVGL

Sequences:

>Translated_507_residues
MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIWSLAAAGKFFEGLVVFMTGVA
LPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQFGRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLAL
GCDYPTAHLVISESIPSSSRGRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS
HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATLFASLPWFLQDLGTYGIGIFT
PTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILLIVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAF
TGPAQIALIYAGFMLFNFMCNMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV
ATSLLGALITWLLRIETKGRRLDDVGL
>Mature_507_residues
MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIWSLAAAGKFFEGLVVFMTGVA
LPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQFGRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLAL
GCDYPTAHLVISESIPSSSRGRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS
HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATLFASLPWFLQDLGTYGIGIFT
PTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILLIVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAF
TGPAQIALIYAGFMLFNFMCNMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV
ATSLLGALITWLLRIETKGRRLDDVGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI24308167, Length=528, Percent_Identity=22.9166666666667, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI213021148, Length=460, Percent_Identity=23.4782608695652, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI166064021, Length=439, Percent_Identity=25.9681093394077, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI166197673, Length=414, Percent_Identity=24.8792270531401, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4506999, Length=406, Percent_Identity=23.8916256157635, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4507005, Length=224, Percent_Identity=27.2321428571429, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI24497490, Length=332, Percent_Identity=23.1927710843373, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI203098995, Length=243, Percent_Identity=29.2181069958848, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI302148518, Length=373, Percent_Identity=23.3243967828418, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786229, Length=460, Percent_Identity=28.2608695652174, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI87082159, Length=458, Percent_Identity=28.82096069869, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1788068, Length=464, Percent_Identity=25.6465517241379, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1789312, Length=474, Percent_Identity=27.8481012658228, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790463, Length=448, Percent_Identity=25.2232142857143, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788074, Length=423, Percent_Identity=26.241134751773, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789207, Length=452, Percent_Identity=24.7787610619469, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082404, Length=289, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32564663, Length=431, Percent_Identity=22.737819025522, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17554160, Length=431, Percent_Identity=24.8259860788863, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17565978, Length=152, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71988651, Length=181, Percent_Identity=30.3867403314917, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6319941, Length=411, Percent_Identity=25.0608272506083, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320595, Length=204, Percent_Identity=25, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320766, Length=455, Percent_Identity=23.5164835164835, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324469, Length=444, Percent_Identity=21.1711711711712, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324400, Length=455, Percent_Identity=23.2967032967033, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19922874, Length=388, Percent_Identity=23.4536082474227, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24640198, Length=513, Percent_Identity=21.8323586744639, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640196, Length=513, Percent_Identity=21.8323586744639, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640200, Length=513, Percent_Identity=21.8323586744639, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649618, Length=376, Percent_Identity=22.6063829787234, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI20130083, Length=425, Percent_Identity=23.2941176470588, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24663515, Length=440, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24663519, Length=440, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24663511, Length=434, Percent_Identity=26.036866359447, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17737451, Length=465, Percent_Identity=26.0215053763441, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24652312, Length=465, Percent_Identity=26.0215053763441, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 54412; Mature: 54412

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIW
CCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
SLAAAGKFFEGLVVFMTGVALPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLALGCDYPTAHLVISESIPSSSR
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS
CCEEEEEHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHEEECCC
HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATL
CEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHH
FASLPWFLQDLGTYGIGIFTPTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHH
IVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAFTGPAQIALIYAGFMLFNFMC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV
CCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ATSLLGALITWLLRIETKGRRLDDVGL
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIW
CCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
SLAAAGKFFEGLVVFMTGVALPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLALGCDYPTAHLVISESIPSSSR
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
GRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS
CCEEEEEHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHEEECCC
HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATL
CEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHH
FASLPWFLQDLGTYGIGIFTPTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILL
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHH
IVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAFTGPAQIALIYAGFMLFNFMC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV
CCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ATSLLGALITWLLRIETKGRRLDDVGL
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]