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The map label for this gene is ycgN [C]

Identifier: 158422724

GI number: 158422724

Start: 1227897

End: 1228490

Strand: Direct

Name: ycgN [C]

Synonym: AZC_1100

Alternate gene names: 158422724

Gene position: 1227897-1228490 (Clockwise)

Preceding gene: 158422720

Following gene: 158422726

Centisome position: 22.87

GC content: 71.72

Gene sequence:

>594_bases
ATGGTTCCCGCCCCGCGCTCTTCATTTCGCCGCAGGGATCGGCTAGCAAGCGGCATGCCCCATGATGCCACGCCCCAAGA
GCCGTTCTGGCGGACCGTGCCGCTCGCCCGCATGACGCCGGAGCAGTGGGAGAGCCTGTGCGACGGCTGCGGTCGCTGCT
GCCTCGTGAAGCTCGAGGACGAGGATACGGGAGAGATCGCCTATACGGACATCGGCTGCCGCCTGCTCGATGGGGAGACC
TGCCGCTGCACCGATTACCCCAACCGTCAGGCGCAGGTGCCCGACTGCGTGCGGCTGACGCCGGAGGCGGTGATGACCAT
CGGCTGGCTGCCGCCCACCTGCGCCTACCGGCTGCTGGACGAGGGCAAGGATCTGCCCTGGTGGCATCCGCTGGTGTCCG
GCGATCCGGCGACGGTGACCGCCGCCGGAATCTCGGTGAGCGGGCGGACGGCCGGCTCGGAGGACGCCTTCGGGCTGATG
GAACTCATCGCCCACGTGGTCTCCTGGCCCACCCGCTGGCCGCGGGGGGCCAAGGCCCGGACGGCCGCGGCGCCGAGGTC
CCGCCGCAAGCCGGCCCCGGACCGTCCGGCCTGA

Upstream 100 bases:

>100_bases
GGTACGCTTCAACCAGCTCCGTGCCGGAGGCCCCCGCCCGGGACTGCGACGACGCTCATGTAGGATGCGCCGCCGGCCAC
GGCAACGCCTGCGTCCGGGT

Downstream 100 bases:

>100_bases
GGCGCGCCGTCAGACCGAGTGGAACGGCGCGGCGGGCCGTACCGGCAGCGGGCCGGGGGCGCCCTCCAGATCCTTCCGGT
CCCGCGGCATCTCGATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MVPAPRSSFRRRDRLASGMPHDATPQEPFWRTVPLARMTPEQWESLCDGCGRCCLVKLEDEDTGEIAYTDIGCRLLDGET
CRCTDYPNRQAQVPDCVRLTPEAVMTIGWLPPTCAYRLLDEGKDLPWWHPLVSGDPATVTAAGISVSGRTAGSEDAFGLM
ELIAHVVSWPTRWPRGAKARTAAAPRSRRKPAPDRPA

Sequences:

>Translated_197_residues
MVPAPRSSFRRRDRLASGMPHDATPQEPFWRTVPLARMTPEQWESLCDGCGRCCLVKLEDEDTGEIAYTDIGCRLLDGET
CRCTDYPNRQAQVPDCVRLTPEAVMTIGWLPPTCAYRLLDEGKDLPWWHPLVSGDPATVTAAGISVSGRTAGSEDAFGLM
ELIAHVVSWPTRWPRGAKARTAAAPRSRRKPAPDRPA
>Mature_197_residues
MVPAPRSSFRRRDRLASGMPHDATPQEPFWRTVPLARMTPEQWESLCDGCGRCCLVKLEDEDTGEIAYTDIGCRLLDGET
CRCTDYPNRQAQVPDCVRLTPEAVMTIGWLPPTCAYRLLDEGKDLPWWHPLVSGDPATVTAAGISVSGRTAGSEDAFGLM
ELIAHVVSWPTRWPRGAKARTAAAPRSRRKPAPDRPA

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=142, Percent_Identity=47.887323943662, Blast_Score=144, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 21771; Mature: 21771

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPAPRSSFRRRDRLASGMPHDATPQEPFWRTVPLARMTPEQWESLCDGCGRCCLVKLED
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEEECC
EDTGEIAYTDIGCRLLDGETCRCTDYPNRQAQVPDCVRLTPEAVMTIGWLPPTCAYRLLD
CCCCCEEEEECCEEEECCCEEEECCCCCCCCCCCHHHHCCHHHHHEECCCCHHHHHHHHH
EGKDLPWWHPLVSGDPATVTAAGISVSGRTAGSEDAFGLMELIAHVVSWPTRWPRGAKAR
CCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
TAAAPRSRRKPAPDRPA
CCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MVPAPRSSFRRRDRLASGMPHDATPQEPFWRTVPLARMTPEQWESLCDGCGRCCLVKLED
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEEECC
EDTGEIAYTDIGCRLLDGETCRCTDYPNRQAQVPDCVRLTPEAVMTIGWLPPTCAYRLLD
CCCCCEEEEECCEEEECCCEEEECCCCCCCCCCCHHHHCCHHHHHEECCCCHHHHHHHHH
EGKDLPWWHPLVSGDPATVTAAGISVSGRTAGSEDAFGLMELIAHVVSWPTRWPRGAKAR
CCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
TAAAPRSRRKPAPDRPA
CCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA