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The map label for this gene is sufB [C]

Identifier: 158422668

GI number: 158422668

Start: 1172110

End: 1173591

Strand: Direct

Name: sufB [C]

Synonym: AZC_1044

Alternate gene names: 158422668

Gene position: 1172110-1173591 (Clockwise)

Preceding gene: 158422667

Following gene: 158422669

Centisome position: 21.83

GC content: 60.86

Gene sequence:

>1482_bases
ATGGCCGCCGTTCAGGAGACGATCGATCAGGTTCGCCAGATCGATGTCGAGCAGTATAAATACGGGTTCGTGACGGACGT
GGAATCCGAAAAGGCCCCGAAGGGCCTGTCGGAGGACGTCATCCGCTTCATCTCGGCCAAGAAGAACGAGCCGGAGTGGA
TGCTGGAATGGCGCCTTGATGCCTATCGCCGCTGGCTTACCATGCGCGAGCCCGAATGGGCCAAGGTGAATTTCCCGAAG
ATCGATTTCCAGGATCTCTATTATTATGCGGCGCCGAAAAAGAAGAAGGCGCTCTCCTCCCTCGACGAGGTCGATCCCGA
GATTCTGAAGACCTATGAGAAGCTCGGCATCCCGCTGCGCGAACAGGAGCTTCTCGCTGGTGTCGAGCGCCCGGAAGGCG
AGCGCAAGATCGCTGTCGATGCGGTCTTCGACAGCGTCTCGGTGGCCACCACCTTCCAGAAGGAGCTGAAGGAGGCGGGC
GTCATCTTCATGCCCATCTCGGAGGCCCTGAAGGAACATCCCGAGCTGGTGCGCAAATATCTCGGCACGGTGGTGCCGGT
GACCGACAATTACTATGCGACGCTGAATTCCGCGGTCTTCTCGGACGGCTCCTTCGTCTATGTACCGGAAGGGGTGCGCT
GCCCCATGGAGCTCTCCACCTATTTCCGCATCAATGAGAAGAACACCGGCCAGTTCGAGCGCACGCTCATCATCGCCGAC
AAGGGCGCCTATGTGAGCTATCTGGAAGGCTGCACGGCGCCCCAGCGCGACGAGAACCAGCTCCACGCCGCGGTGGTCGA
GCTGGTGGTTCTGGACGATGCGGAAATCAAGTACTCCACCGTCCAGAATTGGTATCCCGGCGACAAGGATGGCAAGGGCG
GCATCTACAATTTCGTCACCAAGCGTGGCGACTGCCGGGGCGCGAATTCCAAGATCAGCTGGACGCAAGTGGAGACGGGC
TCCGCCATCACCTGGAAATATCCGAGCTGCGTCCTGCGGGGCGACGGCAGCCAGGGCGAGTTCTATTCCATCGCCATTTC
CAACGGGCATCAGCAGGTGGATTCCGGCACCAAGATGATCCATCTCGGCAAGAACACGTCGAGCCGGATCGTCTCCAAGG
GCATCTCCGCCGGCCAGTCCCAGAACACCTATCGCGGGCTCGTTTCCGCCCACCGCAAGGCCAAGGGCGCACGCAACTTC
ACCGCCTGCGACAGCCTGCTGATCGGAGATCAGTGCGGCGCGCACACCGTGCCTTACATCGAGGCCAAGAACCCGACAAC
GGTGTTCGAGCACGAGGCCACCACCTCCAAGATCTCCGAGGACGTGCTGTTCTATTGCGTGCAGCGCGGGCTCTCGCAGG
AGGAAGCCGTGGGGCTCGTGGTCAACGGCTTCGTCAAGGAGGTGCTCCAGCAGCTCCCCATGGAATTCGCGGTGGAGGCG
CAGAAGCTCATCTCCATCTCGCTCGAAGGCAGCGTCGGCTGA

Upstream 100 bases:

>100_bases
TGCAGCGCCGTGCCGGCTTTCGCCGGCTGGCGCCCGGCACGGCCCGCGTGCCGGGCCTGATCTTCTGCACAGTCCGTTCC
ATTGCCGTGAGGAGCCCCAC

Downstream 100 bases:

>100_bases
CCTGTCGCTTCTCCAATTGCAAGGCGAGGACTTCGTGATGACCGCTCTCCTGGAAATCCGCGACCTCAAGGCCGAAGTGG
CCGGGCGCCAGATCCTCAAC

Product: FeS assembly SufB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MAAVQETIDQVRQIDVEQYKYGFVTDVESEKAPKGLSEDVIRFISAKKNEPEWMLEWRLDAYRRWLTMREPEWAKVNFPK
IDFQDLYYYAAPKKKKALSSLDEVDPEILKTYEKLGIPLREQELLAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAG
VIFMPISEALKEHPELVRKYLGTVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIAD
KGAYVSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGANSKISWTQVETG
SAITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNF
TACDSLLIGDQCGAHTVPYIEAKNPTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEA
QKLISISLEGSVG

Sequences:

>Translated_493_residues
MAAVQETIDQVRQIDVEQYKYGFVTDVESEKAPKGLSEDVIRFISAKKNEPEWMLEWRLDAYRRWLTMREPEWAKVNFPK
IDFQDLYYYAAPKKKKALSSLDEVDPEILKTYEKLGIPLREQELLAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAG
VIFMPISEALKEHPELVRKYLGTVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIAD
KGAYVSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGANSKISWTQVETG
SAITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNF
TACDSLLIGDQCGAHTVPYIEAKNPTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEA
QKLISISLEGSVG
>Mature_492_residues
AAVQETIDQVRQIDVEQYKYGFVTDVESEKAPKGLSEDVIRFISAKKNEPEWMLEWRLDAYRRWLTMREPEWAKVNFPKI
DFQDLYYYAAPKKKKALSSLDEVDPEILKTYEKLGIPLREQELLAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAGV
IFMPISEALKEHPELVRKYLGTVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIADK
GAYVSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGANSKISWTQVETGS
AITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNFT
ACDSLLIGDQCGAHTVPYIEAKNPTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEAQ
KLISISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=489, Percent_Identity=59.5092024539877, Blast_Score=631, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 55069; Mature: 54938

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVQETIDQVRQIDVEQYKYGFVTDVESEKAPKGLSEDVIRFISAKKNEPEWMLEWRLD
CCHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHH
AYRRWLTMREPEWAKVNFPKIDFQDLYYYAAPKKKKALSSLDEVDPEILKTYEKLGIPLR
HHHHHHCCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
EQELLAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAGVIFMPISEALKEHPELVRKY
HHHHHHCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
LGTVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIAD
HCCEEEECCCHHEEECHHEECCCCEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEC
KGAYVSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVT
CCCHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCEEEHHHCCCCCCCCCCCCCHHHHHH
KRGDCRGANSKISWTQVETGSAITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMI
CCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHCCCCEEE
HLGKNTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNFTACDSLLIGDQCGAHTVPYI
EECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCEE
EAKNPTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEA
ECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QKLISISLEGSVG
HHEEEEEECCCCC
>Mature Secondary Structure 
AAVQETIDQVRQIDVEQYKYGFVTDVESEKAPKGLSEDVIRFISAKKNEPEWMLEWRLD
CHHHHHHHHHHHCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHH
AYRRWLTMREPEWAKVNFPKIDFQDLYYYAAPKKKKALSSLDEVDPEILKTYEKLGIPLR
HHHHHHCCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
EQELLAGVERPEGERKIAVDAVFDSVSVATTFQKELKEAGVIFMPISEALKEHPELVRKY
HHHHHHCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHH
LGTVVPVTDNYYATLNSAVFSDGSFVYVPEGVRCPMELSTYFRINEKNTGQFERTLIIAD
HCCEEEECCCHHEEECHHEECCCCEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEC
KGAYVSYLEGCTAPQRDENQLHAAVVELVVLDDAEIKYSTVQNWYPGDKDGKGGIYNFVT
CCCHHHHHHCCCCCCCCHHHHHHHHHHHEEECCCCEEEHHHCCCCCCCCCCCCCHHHHHH
KRGDCRGANSKISWTQVETGSAITWKYPSCVLRGDGSQGEFYSIAISNGHQQVDSGTKMI
CCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEECCCCHHHCCCCEEE
HLGKNTSSRIVSKGISAGQSQNTYRGLVSAHRKAKGARNFTACDSLLIGDQCGAHTVPYI
EECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCCEE
EAKNPTTVFEHEATTSKISEDVLFYCVQRGLSQEEAVGLVVNGFVKEVLQQLPMEFAVEA
ECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QKLISISLEGSVG
HHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]