Click here to switch to the map view.

The map label for this gene is 158422631

Identifier: 158422631

GI number: 158422631

Start: 1129338

End: 1130150

Strand: Direct

Name: 158422631

Synonym: AZC_1007

Alternate gene names: NA

Gene position: 1129338-1130150 (Clockwise)

Preceding gene: 158422630

Following gene: 158422632

Centisome position: 21.03

GC content: 69.25

Gene sequence:

>813_bases
ATGGCACCCCGCGCCTTCTGGAAGGGCTGGCTGAAGCTCTCGCTCGTCACCTGCCGCGTCGCCATGTCCCCCGCCACCAG
CGACCGGGAGAAGGTGCGCTTCCACACGCTGAACCGGGACACCGGCAACCGCATCGTCACGCGCTATGTGGACGAGGGCA
CGGGCAAGCCTGTGCGGGAGGAGGACGAGGCGCGCGGCTATGCCTCCGGCGAGGACAGCTACGTGCTGATCGAGGACGAG
GATCTTGAGGCCATCGCGCTCGATACGGTGCGCACCATCGACATCGCGAGCTTCGTCGACCGCGACGACGTGAGCTGGCT
CTATCTGGACAAGCCGCACTATCTGGTGCCGGACGATGAGGTGGGCGCGGAGGCCTTCGCGGTCATCCGCGACGCCATGG
CGAAGACCGGCAAGGTCGCCCTCTCGCGCCTCGTGCTCTATCGCCGCGAGCGCACCGTCATGCTGGAGCCGCGCGGGCTC
GGCTTCGTGCTCTGGACGCTGCGCTATGCGGACGAGGTGCGCCATTTCGAGGGCGCGCCCAAGGCCGAGGGCAAGCCCGA
CAAGGCTGCGCTCGGCCTGCTCGGCAAGCTCATCGACAGCGAGACGAAGCCCTGGAGCCCGGATCTCGTCACCGATCCGG
TGCAGGAGGGGCTGGTCGACCTCATCGCCGCGAAGCGCCGCAAGCGTCCGGCCCGCAAGCCGAAGGTCGCCGCGCCCGAG
CCCACCGGCGGCAATGTGGTGAACATCATGGATGCCCTGCGCCGCAGCCTGAAGGCCGAAGGCGGCGACGGCGGGCGCTC
GCGCAAGCGCTGA

Upstream 100 bases:

>100_bases
CCGATCCATGGGCTGATTTCCGGAAGGCGGCGGCGCCCCTGCCGGCGGGCAGAACGGCGGGCGGAACGGCCGGCGGCAAA
CGGCGCGGCGGGAGGCGCTG

Downstream 100 bases:

>100_bases
GGCCGCGCGCGGGCAAGGCCCGGGTCGGGTCGTCCTGCTATAAGGTCCGAAACGGAAACCGGCTGGACCGGCCCCGTCTC
AGCGAATGAATCCGCCTCCG

Product: ATP-dependent DNA ligase Ku

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAPRAFWKGWLKLSLVTCRVAMSPATSDREKVRFHTLNRDTGNRIVTRYVDEGTGKPVREEDEARGYASGEDSYVLIEDE
DLEAIALDTVRTIDIASFVDRDDVSWLYLDKPHYLVPDDEVGAEAFAVIRDAMAKTGKVALSRLVLYRRERTVMLEPRGL
GFVLWTLRYADEVRHFEGAPKAEGKPDKAALGLLGKLIDSETKPWSPDLVTDPVQEGLVDLIAAKRRKRPARKPKVAAPE
PTGGNVVNIMDALRRSLKAEGGDGGRSRKR

Sequences:

>Translated_270_residues
MAPRAFWKGWLKLSLVTCRVAMSPATSDREKVRFHTLNRDTGNRIVTRYVDEGTGKPVREEDEARGYASGEDSYVLIEDE
DLEAIALDTVRTIDIASFVDRDDVSWLYLDKPHYLVPDDEVGAEAFAVIRDAMAKTGKVALSRLVLYRRERTVMLEPRGL
GFVLWTLRYADEVRHFEGAPKAEGKPDKAALGLLGKLIDSETKPWSPDLVTDPVQEGLVDLIAAKRRKRPARKPKVAAPE
PTGGNVVNIMDALRRSLKAEGGDGGRSRKR
>Mature_269_residues
APRAFWKGWLKLSLVTCRVAMSPATSDREKVRFHTLNRDTGNRIVTRYVDEGTGKPVREEDEARGYASGEDSYVLIEDED
LEAIALDTVRTIDIASFVDRDDVSWLYLDKPHYLVPDDEVGAEAFAVIRDAMAKTGKVALSRLVLYRRERTVMLEPRGLG
FVLWTLRYADEVRHFEGAPKAEGKPDKAALGLLGKLIDSETKPWSPDLVTDPVQEGLVDLIAAKRRKRPARKPKVAAPEP
TGGNVVNIMDALRRSLKAEGGDGGRSRKR

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 30129; Mature: 29997

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRAFWKGWLKLSLVTCRVAMSPATSDREKVRFHTLNRDTGNRIVTRYVDEGTGKPVRE
CCCHHHHHHHHHHHHEEEEEEECCCCCCCHHEEEEEECCCCCCEEEEEEECCCCCCCCCC
EDEARGYASGEDSYVLIEDEDLEAIALDTVRTIDIASFVDRDDVSWLYLDKPHYLVPDDE
CHHHCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCCH
VGAEAFAVIRDAMAKTGKVALSRLVLYRRERTVMLEPRGLGFVLWTLRYADEVRHFEGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCC
KAEGKPDKAALGLLGKLIDSETKPWSPDLVTDPVQEGLVDLIAAKRRKRPARKPKVAAPE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PTGGNVVNIMDALRRSLKAEGGDGGRSRKR
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
APRAFWKGWLKLSLVTCRVAMSPATSDREKVRFHTLNRDTGNRIVTRYVDEGTGKPVRE
CCHHHHHHHHHHHHEEEEEEECCCCCCCHHEEEEEECCCCCCEEEEEEECCCCCCCCCC
EDEARGYASGEDSYVLIEDEDLEAIALDTVRTIDIASFVDRDDVSWLYLDKPHYLVPDDE
CHHHCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCCH
VGAEAFAVIRDAMAKTGKVALSRLVLYRRERTVMLEPRGLGFVLWTLRYADEVRHFEGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHHHCCCC
KAEGKPDKAALGLLGKLIDSETKPWSPDLVTDPVQEGLVDLIAAKRRKRPARKPKVAAPE
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PTGGNVVNIMDALRRSLKAEGGDGGRSRKR
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA