| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yyaM [H]
Identifier: 158422611
GI number: 158422611
Start: 1104084
End: 1105010
Strand: Reverse
Name: yyaM [H]
Synonym: AZC_0987
Alternate gene names: 158422611
Gene position: 1105010-1104084 (Counterclockwise)
Preceding gene: 158422612
Following gene: 158422607
Centisome position: 20.58
GC content: 66.99
Gene sequence:
>927_bases ATGTCCGTTCGCGCCGCCCAGTCTCCCTTGGCTGCCATCGCCAACGCGCCTTATCTGCTGCTCAGCTTCACGGCCCTGCT CTGGGCCATCAACATGGTGATCGGCCGCTACATGGTGGGCGCCGTGCCGCCCATCACCACGGCCTGCGTGCGCTGGCTGC TGGCGACGCTGATCCTGCTGCCGTTCGCCTGGCGGCAGATCGTGCGCGACGCGCCCCTCCTCCGCCGCCACTTCTGGCGC CTCGTGCTGCTCTCGTCGACCGGCATCGCCAGCTACAACGCCATGAGCTATTACGGCCTCCAGTACACGCAGGCGCTCAA CGGACTGCTGCTGCAATCCATCAGCCCCCTGCTGGTCGCCGTCTGGAGCCTCCTGCTGTTCCGCGACGGCCTGTCGCTCG GCCAGACCGTGGGCGTCTTCATCTCGCTCGCCGGCGTGCTCATCATCATCAGCGGCGGCAGCATCGACACGCTGCTGCAC CTGACCCTCAATGCCGGCGACATCTGGATCATGGTGGCGCTCGCAATCTATGCCTTCTACACGGCGATACTGCGGGTGCG CCCGCCGCTCGGGCCGCTCTCCTTCCTTGCCGCCATCATGGCCATTGGCGGCGTCCTGCTCCTGCCGGTGATGGCCTGGG AACTGACCCATGGCGCGGAGCTGCATTTCAACCGCTTCACGCTGGGCGTGTTCGCCTATGTTTCCACCGCCCCCTCGCTG CTCGCCTATCTCGCCTTCAATCGCGGGGTGCAGCTTGTCGGCGCCAACCGGGCGGCGCCCTTCTTCCACCTCATGCCGGT GTTCGGCACGGCGCTGGCCATCCTCTTCCTCGGCGAGACCTTCGCCTGGTTCCATGCGGCCGGGTATGCGCTGGTGCTGA CGGGCATCCTCACCGCGACACGGGCGAAGGGTGCAAAGCCCGCCTGA
Upstream 100 bases:
>100_bases TGGTGCACAGGCTTCCGGCCGCGCAACGACGCGGCTTGGGCGGCGCCCGCCGCCACAGCAGAAGAATGGGTCGCCCCTGC CCGGGGCGCCAGGAGGATTC
Downstream 100 bases:
>100_bases AGGCCTTCGCCAGCCTGACCGCTATCCCTCGTACATCACGAAGCTCGCCCACACCTCGGGATCGTCCGCCTGCGGCACCT TGCCGGCGATGGCGTCCAGC
Product: drug/metabolite transporter (DMT) permease superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSVRAAQSPLAAIANAPYLLLSFTALLWAINMVIGRYMVGAVPPITTACVRWLLATLILLPFAWRQIVRDAPLLRRHFWR LVLLSSTGIASYNAMSYYGLQYTQALNGLLLQSISPLLVAVWSLLLFRDGLSLGQTVGVFISLAGVLIIISGGSIDTLLH LTLNAGDIWIMVALAIYAFYTAILRVRPPLGPLSFLAAIMAIGGVLLLPVMAWELTHGAELHFNRFTLGVFAYVSTAPSL LAYLAFNRGVQLVGANRAAPFFHLMPVFGTALAILFLGETFAWFHAAGYALVLTGILTATRAKGAKPA
Sequences:
>Translated_308_residues MSVRAAQSPLAAIANAPYLLLSFTALLWAINMVIGRYMVGAVPPITTACVRWLLATLILLPFAWRQIVRDAPLLRRHFWR LVLLSSTGIASYNAMSYYGLQYTQALNGLLLQSISPLLVAVWSLLLFRDGLSLGQTVGVFISLAGVLIIISGGSIDTLLH LTLNAGDIWIMVALAIYAFYTAILRVRPPLGPLSFLAAIMAIGGVLLLPVMAWELTHGAELHFNRFTLGVFAYVSTAPSL LAYLAFNRGVQLVGANRAAPFFHLMPVFGTALAILFLGETFAWFHAAGYALVLTGILTATRAKGAKPA >Mature_307_residues SVRAAQSPLAAIANAPYLLLSFTALLWAINMVIGRYMVGAVPPITTACVRWLLATLILLPFAWRQIVRDAPLLRRHFWRL VLLSSTGIASYNAMSYYGLQYTQALNGLLLQSISPLLVAVWSLLLFRDGLSLGQTVGVFISLAGVLIIISGGSIDTLLHL TLNAGDIWIMVALAIYAFYTAILRVRPPLGPLSFLAAIMAIGGVLLLPVMAWELTHGAELHFNRFTLGVFAYVSTAPSLL AYLAFNRGVQLVGANRAAPFFHLMPVFGTALAILFLGETFAWFHAAGYALVLTGILTATRAKGAKPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33256; Mature: 33125
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRAAQSPLAAIANAPYLLLSFTALLWAINMVIGRYMVGAVPPITTACVRWLLATLILL CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH PFAWRQIVRDAPLLRRHFWRLVLLSSTGIASYNAMSYYGLQYTQALNGLLLQSISPLLVA HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VWSLLLFRDGLSLGQTVGVFISLAGVLIIISGGSIDTLLHLTLNAGDIWIMVALAIYAFY HHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHH TAILRVRPPLGPLSFLAAIMAIGGVLLLPVMAWELTHGAELHFNRFTLGVFAYVSTAPSL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH LAYLAFNRGVQLVGANRAAPFFHLMPVFGTALAILFLGETFAWFHAAGYALVLTGILTAT HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAKGAKPA HCCCCCCC >Mature Secondary Structure SVRAAQSPLAAIANAPYLLLSFTALLWAINMVIGRYMVGAVPPITTACVRWLLATLILL CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH PFAWRQIVRDAPLLRRHFWRLVLLSSTGIASYNAMSYYGLQYTQALNGLLLQSISPLLVA HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VWSLLLFRDGLSLGQTVGVFISLAGVLIIISGGSIDTLLHLTLNAGDIWIMVALAIYAFY HHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHH TAILRVRPPLGPLSFLAAIMAIGGVLLLPVMAWELTHGAELHFNRFTLGVFAYVSTAPSL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHH LAYLAFNRGVQLVGANRAAPFFHLMPVFGTALAILFLGETFAWFHAAGYALVLTGILTAT HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAKGAKPA HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]