| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is qor [H]
Identifier: 158422553
GI number: 158422553
Start: 1041786
End: 1042766
Strand: Direct
Name: qor [H]
Synonym: AZC_0929
Alternate gene names: 158422553
Gene position: 1041786-1042766 (Clockwise)
Preceding gene: 158422552
Following gene: 158422556
Centisome position: 19.4
GC content: 67.69
Gene sequence:
>981_bases ATGACGACCGCGCGTGCTGTTCGCATTCATTCCTTTGGCGGGCCAGAGGTGCTCCAACTGGAAACCGTGGAGCTTCCGCC GCCCGCGGCCGGCGAGGTGCAGGTGCGCCAGACGGCGGTCGGCTTCAATTACATCGACGTCTACCAGCGCACGGGCATCT ATCCGCTGCCGCTTCCCACCGGCCTCGGGCACGAGGCGGCGGGCATCGTGGAAGCTGTTGGCGAAGGCGTGACCTCGCTC AAGGTCGGGGACCGCATCGCCTATATCAATGCCGGCATTGGCGCCTATGCGGACCGCCGCAACCTGCCCGCCGAACGGCT GGTGACCATACCCGACAGCATCTCCGACGAGGAGGCCGCCGCGGTGATCTTCAAGGGGCTCACGGCGCAGTATCTGCTGC GCAAGACCTATAAGGTGGAGCCGGGCGACATCGTGCTGATCCACGCCGCCGCGGGCGGCGTGGGACAGATCATGTCCTCC TGGGCCAAGGCGCTCGGCGCCTTCGTCATCGGCACCGCCGGGTCGCCCGCCAAGTGCGACATCGCCAAAGCCGCTGGCTG TGACGTGGCGATCAATTATTCGCAGGCCGACTGGCCCGAGCAGGTGATCGCCGCCAGCGGCGGACGGAAGGCGCGGGTGG TGTACGATTCCGTCGGGAAGGACACCTTCCTGAAGTCGCTGGACTGCGTGGCGCCCTTCGGCCTCATGGTGCTCTTCGGC GGCGCGTCCGGCCCTGCGCCGGACATCTCGCCGGAACTGCTCTCCAAGAAGGGCAGCCTCTATCTGACCCGCGCCTCGAT CTTCCCGCGCAATGCCGATCCCGCCGATCTCAGGGCCAATGCGGCGGAACTGTTCGCGGCGCTCGACGCGGGCTATGTAA AGCCGGTGATCGCCGCCCGCTTTCCGCTCGGCGAGGTGGCGGCCGCCCACCGCACGGCGGAAGCGCGCACCAATGCGGGC GCGATCCTGCTGATACCCTGA
Upstream 100 bases:
>100_bases GCCTCGTCCAAATTCCCGTCCTCAATCCATCTCTGCCGTCTTGCGGGATCGCAGCCTTGGGCGCAAGGTACGATAATTAT CGTACCATAGAGGCTGCCCC
Downstream 100 bases:
>100_bases CCAGCAGGTGACGCCGTGCGGCTCTAGATGTCGTTTCCAAGAAGGTTGTTCAGCCTTGTCCATGGGCTGAGGCCGTTATG AGCGGAGTGGGGCCGGTTGA
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTTARAVRIHSFGGPEVLQLETVELPPPAAGEVQVRQTAVGFNYIDVYQRTGIYPLPLPTGLGHEAAGIVEAVGEGVTSL KVGDRIAYINAGIGAYADRRNLPAERLVTIPDSISDEEAAAVIFKGLTAQYLLRKTYKVEPGDIVLIHAAAGGVGQIMSS WAKALGAFVIGTAGSPAKCDIAKAAGCDVAINYSQADWPEQVIAASGGRKARVVYDSVGKDTFLKSLDCVAPFGLMVLFG GASGPAPDISPELLSKKGSLYLTRASIFPRNADPADLRANAAELFAALDAGYVKPVIAARFPLGEVAAAHRTAEARTNAG AILLIP
Sequences:
>Translated_326_residues MTTARAVRIHSFGGPEVLQLETVELPPPAAGEVQVRQTAVGFNYIDVYQRTGIYPLPLPTGLGHEAAGIVEAVGEGVTSL KVGDRIAYINAGIGAYADRRNLPAERLVTIPDSISDEEAAAVIFKGLTAQYLLRKTYKVEPGDIVLIHAAAGGVGQIMSS WAKALGAFVIGTAGSPAKCDIAKAAGCDVAINYSQADWPEQVIAASGGRKARVVYDSVGKDTFLKSLDCVAPFGLMVLFG GASGPAPDISPELLSKKGSLYLTRASIFPRNADPADLRANAAELFAALDAGYVKPVIAARFPLGEVAAAHRTAEARTNAG AILLIP >Mature_325_residues TTARAVRIHSFGGPEVLQLETVELPPPAAGEVQVRQTAVGFNYIDVYQRTGIYPLPLPTGLGHEAAGIVEAVGEGVTSLK VGDRIAYINAGIGAYADRRNLPAERLVTIPDSISDEEAAAVIFKGLTAQYLLRKTYKVEPGDIVLIHAAAGGVGQIMSSW AKALGAFVIGTAGSPAKCDIAKAAGCDVAINYSQADWPEQVIAASGGRKARVVYDSVGKDTFLKSLDCVAPFGLMVLFGG ASGPAPDISPELLSKKGSLYLTRASIFPRNADPADLRANAAELFAALDAGYVKPVIAARFPLGEVAAAHRTAEARTNAGA ILLIP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=313, Percent_Identity=29.3929712460064, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI13236495, Length=313, Percent_Identity=29.3929712460064, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=32.4242424242424, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=32.4242424242424, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI18379349, Length=341, Percent_Identity=27.8592375366569, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI194239676, Length=313, Percent_Identity=28.7539936102236, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI24308257, Length=344, Percent_Identity=28.1976744186047, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI28557745, Length=231, Percent_Identity=31.1688311688312, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI67078404, Length=244, Percent_Identity=30.327868852459, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI34577061, Length=69, Percent_Identity=50.7246376811594, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI4501929, Length=69, Percent_Identity=50.7246376811594, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI197927207, Length=175, Percent_Identity=26.2857142857143, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4501933, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI67078406, Length=188, Percent_Identity=30.3191489361702, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI226056130, Length=249, Percent_Identity=27.710843373494, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI226059159, Length=247, Percent_Identity=27.9352226720648, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI226059133, Length=247, Percent_Identity=27.9352226720648, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790485, Length=328, Percent_Identity=46.9512195121951, Blast_Score=283, Evalue=9e-78, Organism=Escherichia coli, GI1787863, Length=329, Percent_Identity=26.7477203647416, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17507255, Length=324, Percent_Identity=27.7777777777778, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17556000, Length=259, Percent_Identity=26.2548262548263, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536829, Length=164, Percent_Identity=31.0975609756098, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71988145, Length=252, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=35.1851851851852, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6323961, Length=268, Percent_Identity=25.7462686567164, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324486, Length=253, Percent_Identity=27.6679841897233, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI45550423, Length=246, Percent_Identity=25.609756097561, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17737895, Length=70, Percent_Identity=48.5714285714286, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 33966; Mature: 33835
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARAVRIHSFGGPEVLQLETVELPPPAAGEVQVRQTAVGFNYIDVYQRTGIYPLPLPT CCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCEEECCCCC GLGHEAAGIVEAVGEGVTSLKVGDRIAYINAGIGAYADRRNLPAERLVTIPDSISDEEAA CCCCHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHEEECCCCCCCHHHH AVIFKGLTAQYLLRKTYKVEPGDIVLIHAAAGGVGQIMSSWAKALGAFVIGTAGSPAKCD HHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCC IAKAAGCDVAINYSQADWPEQVIAASGGRKARVVYDSVGKDTFLKSLDCVAPFGLMVLFG HHHCCCCCEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEC GASGPAPDISPELLSKKGSLYLTRASIFPRNADPADLRANAAELFAALDAGYVKPVIAAR CCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHC FPLGEVAAAHRTAEARTNAGAILLIP CCCHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure TTARAVRIHSFGGPEVLQLETVELPPPAAGEVQVRQTAVGFNYIDVYQRTGIYPLPLPT CCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCEEECCCCC GLGHEAAGIVEAVGEGVTSLKVGDRIAYINAGIGAYADRRNLPAERLVTIPDSISDEEAA CCCCHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCCHHHEEECCCCCCCHHHH AVIFKGLTAQYLLRKTYKVEPGDIVLIHAAAGGVGQIMSSWAKALGAFVIGTAGSPAKCD HHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCCC IAKAAGCDVAINYSQADWPEQVIAASGGRKARVVYDSVGKDTFLKSLDCVAPFGLMVLFG HHHCCCCCEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEC GASGPAPDISPELLSKKGSLYLTRASIFPRNADPADLRANAAELFAALDAGYVKPVIAAR CCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHC FPLGEVAAAHRTAEARTNAGAILLIP CCCHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]