| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yhjG [H]
Identifier: 158422360
GI number: 158422360
Start: 828976
End: 830568
Strand: Reverse
Name: yhjG [H]
Synonym: AZC_0736
Alternate gene names: 158422360
Gene position: 830568-828976 (Counterclockwise)
Preceding gene: 158422365
Following gene: 158422359
Centisome position: 15.47
GC content: 70.12
Gene sequence:
>1593_bases ATGTCTCAAGCCACCACGGGGCCGGTGCTGATTGCCGGCGCCGGCCCCACCGGCCTGTCGCTGGCCATCGTCCTGCGGCA ATTCGGGATCGACGTACGCCTCATCGACAAGGCCCCGCAGGCGGCCACGGTCTCCAAGGCCCTGGCAGTGTGGAGCGCGA GCCTGGAGGCGCTCGGCGCCATGGGGGCCGTGGAGGCCTTCATGGCCGAGGGCGCCCATCTCAATTCGCTGATCGTGGGC GAGGGCCACAAGCCACTCGCCACGCTGGCGGTGGGCGAGGGCATCGACAGCCCCTACCCTTTCCCCTTGCTGCTGCCGCA GTCGCGCACCGAGGCCATCCTCACGCAGCGGCTCGCGGCGCTGGGCGCCGAGATCGAGCGCACGGTCGAACTCTCCGGCT TCACGCAGGATACCGGCGGCGTCACCGCCACCCTGACCCATGCGGACGGCCGGCGGGAGGAGATGCGGGTGGCCTATCTC GTGGGCTGCGACGGCGCCCGCAGCAGCGTGCGCCAGGGCCTCGACATCGCCTTCGAGGGCTATACGGAGCCACAGACCTT CCTGCTGGGCGACGTGAAGATCGACGGCGGCGCGCTCGATCACCGCAGCATCTACATCTGGTGGCAGAACGGCGCCACCG CTGCCCTCTTTCCCTTCGAGACAGACACCTGGCGCATCTTCGGCGCCCGCACCGACGCAACCAACGACGCCCCTCCGACG CTGGAGGAGCTTCAGGCCTATATGGACCGCCATGGCCCGCCCGGCTGCCGCCTGCGCGACGCCACCTGGCTCTCCGCCTT CCGCACCAACGAGCGCCTCGCCGCCCGCTATCGCAACGGCCGCGTCTTCCTTGCCGGCGACGCGGCACACATCCATTCGC CCGCCGGCGGACAGGGCATGAACACGGGCGTGCAGGACGCCTTCAATCTCGGCTGGAAACTCGCTTATGCGCTGCTGGGC CGGGGGGATGCGGAACTGCTACTCGACAGCTATGAGGCCGAGCGCCGCCCCGTCGCCCGCGACGTGGTGAAGGGCGCCGC CCAGAAGTTGCACGTCGCCTTCGCCGGCAGCCGCATCACCCAGTTCGTCCGCGATGTGGCGGTGACAGTGATCGGCAATC TCTCCACCGCGCAGAAGAAGCTCCAGACCGAATTGTCGGAGACCGCCATCACCTATCACGAGGGGCCTCTGGTAGCCCTC GGCGCGCCACCCCGCAGTCCGCAGCGCACGGAGGTCGGCACCCGCGCGCTGGAGGCGCTGTTCGCCGATCCCCGCAGTGG CGTCACCACCGCGCTCTGGCCGCTGATCGGCGGCACCGCGCACACCTTGCTGCTCTTTCCCGACGCGCAGACGCCCCTCA CGGTGGAAGCCGCGACGGTGGGATGCGGCGAGGCCTTGCGCATCCTCAGCATCCCACCCTCCAGCGATCCGCAAGGACTG GTGCGCGAGCGCTACCGCATCCGCAAGGCCGGCTGGGTGCTGATCCGGCCCGATCAGGTGGTGGCGGCGCGGGGGGACGC GGGCAACCTGACGGGCCTCGCCAACTACCTCGATCGTGTGGTACGGCCGGCGCAGATGGCGCTGTCGGCCTGA
Upstream 100 bases:
>100_bases AGAGGGTCACGGGCCTACTTGCGGAAACCAAGGAAACTGATATCGTTTCTATAGTTTCCTCATCAGGCCCACTGGTGCCT CGTCAACGGGGGAGGATGGA
Downstream 100 bases:
>100_bases CATGCCGCGATGATCCGGCCGGCGCGCCCGTGTTGCGTTCCGGCCGGACCCTTGGCCCCTCCGGCCCGGCCGGAGAAGGA GGCCCCCGCATCTTGTCCGA
Product: FAD-binding monooxygenase
Products: H2O; 3-(2,3-dihydroxyphenyl)propionate; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MSQATTGPVLIAGAGPTGLSLAIVLRQFGIDVRLIDKAPQAATVSKALAVWSASLEALGAMGAVEAFMAEGAHLNSLIVG EGHKPLATLAVGEGIDSPYPFPLLLPQSRTEAILTQRLAALGAEIERTVELSGFTQDTGGVTATLTHADGRREEMRVAYL VGCDGARSSVRQGLDIAFEGYTEPQTFLLGDVKIDGGALDHRSIYIWWQNGATAALFPFETDTWRIFGARTDATNDAPPT LEELQAYMDRHGPPGCRLRDATWLSAFRTNERLAARYRNGRVFLAGDAAHIHSPAGGQGMNTGVQDAFNLGWKLAYALLG RGDAELLLDSYEAERRPVARDVVKGAAQKLHVAFAGSRITQFVRDVAVTVIGNLSTAQKKLQTELSETAITYHEGPLVAL GAPPRSPQRTEVGTRALEALFADPRSGVTTALWPLIGGTAHTLLLFPDAQTPLTVEAATVGCGEALRILSIPPSSDPQGL VRERYRIRKAGWVLIRPDQVVAARGDAGNLTGLANYLDRVVRPAQMALSA
Sequences:
>Translated_530_residues MSQATTGPVLIAGAGPTGLSLAIVLRQFGIDVRLIDKAPQAATVSKALAVWSASLEALGAMGAVEAFMAEGAHLNSLIVG EGHKPLATLAVGEGIDSPYPFPLLLPQSRTEAILTQRLAALGAEIERTVELSGFTQDTGGVTATLTHADGRREEMRVAYL VGCDGARSSVRQGLDIAFEGYTEPQTFLLGDVKIDGGALDHRSIYIWWQNGATAALFPFETDTWRIFGARTDATNDAPPT LEELQAYMDRHGPPGCRLRDATWLSAFRTNERLAARYRNGRVFLAGDAAHIHSPAGGQGMNTGVQDAFNLGWKLAYALLG RGDAELLLDSYEAERRPVARDVVKGAAQKLHVAFAGSRITQFVRDVAVTVIGNLSTAQKKLQTELSETAITYHEGPLVAL GAPPRSPQRTEVGTRALEALFADPRSGVTTALWPLIGGTAHTLLLFPDAQTPLTVEAATVGCGEALRILSIPPSSDPQGL VRERYRIRKAGWVLIRPDQVVAARGDAGNLTGLANYLDRVVRPAQMALSA >Mature_529_residues SQATTGPVLIAGAGPTGLSLAIVLRQFGIDVRLIDKAPQAATVSKALAVWSASLEALGAMGAVEAFMAEGAHLNSLIVGE GHKPLATLAVGEGIDSPYPFPLLLPQSRTEAILTQRLAALGAEIERTVELSGFTQDTGGVTATLTHADGRREEMRVAYLV GCDGARSSVRQGLDIAFEGYTEPQTFLLGDVKIDGGALDHRSIYIWWQNGATAALFPFETDTWRIFGARTDATNDAPPTL EELQAYMDRHGPPGCRLRDATWLSAFRTNERLAARYRNGRVFLAGDAAHIHSPAGGQGMNTGVQDAFNLGWKLAYALLGR GDAELLLDSYEAERRPVARDVVKGAAQKLHVAFAGSRITQFVRDVAVTVIGNLSTAQKKLQTELSETAITYHEGPLVALG APPRSPQRTEVGTRALEALFADPRSGVTTALWPLIGGTAHTLLLFPDAQTPLTVEAATVGCGEALRILSIPPSSDPQGLV RERYRIRKAGWVLIRPDQVVAARGDAGNLTGLANYLDRVVRPAQMALSA
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=541, Percent_Identity=26.4325323475046, Blast_Score=141, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: 1.14.13.- [C]
Molecular weight: Translated: 56508; Mature: 56377
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQATTGPVLIAGAGPTGLSLAIVLRQFGIDVRLIDKAPQAATVSKALAVWSASLEALGA CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH MGAVEAFMAEGAHLNSLIVGEGHKPLATLAVGEGIDSPYPFPLLLPQSRTEAILTQRLAA HHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHH LGAEIERTVELSGFTQDTGGVTATLTHADGRREEMRVAYLVGCDGARSSVRQGLDIAFEG HCHHHHEEEEECCCEECCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHHCCCEEEEEC YTEPQTFLLGDVKIDGGALDHRSIYIWWQNGATAALFPFETDTWRIFGARTDATNDAPPT CCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCC LEELQAYMDRHGPPGCRLRDATWLSAFRTNERLAARYRNGRVFLAGDAAHIHSPAGGQGM HHHHHHHHHCCCCCCCEEECHHHHHHHHCCHHHHHHCCCCEEEEEECHHEECCCCCCCCC NTGVQDAFNLGWKLAYALLGRGDAELLLDSYEAERRPVARDVVKGAAQKLHVAFAGSRIT CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECHHHHH QFVRDVAVTVIGNLSTAQKKLQTELSETAITYHEGPLVALGAPPRSPQRTEVGTRALEAL HHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCHHHHHHHHHHHH FADPRSGVTTALWPLIGGTAHTLLLFPDAQTPLTVEAATVGCGEALRILSIPPSSDPQGL HCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHH VRERYRIRKAGWVLIRPDQVVAARGDAGNLTGLANYLDRVVRPAQMALSA HHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure SQATTGPVLIAGAGPTGLSLAIVLRQFGIDVRLIDKAPQAATVSKALAVWSASLEALGA CCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH MGAVEAFMAEGAHLNSLIVGEGHKPLATLAVGEGIDSPYPFPLLLPQSRTEAILTQRLAA HHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHH LGAEIERTVELSGFTQDTGGVTATLTHADGRREEMRVAYLVGCDGARSSVRQGLDIAFEG HCHHHHEEEEECCCEECCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHHCCCEEEEEC YTEPQTFLLGDVKIDGGALDHRSIYIWWQNGATAALFPFETDTWRIFGARTDATNDAPPT CCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCC LEELQAYMDRHGPPGCRLRDATWLSAFRTNERLAARYRNGRVFLAGDAAHIHSPAGGQGM HHHHHHHHHCCCCCCCEEECHHHHHHHHCCHHHHHHCCCCEEEEEECHHEECCCCCCCCC NTGVQDAFNLGWKLAYALLGRGDAELLLDSYEAERRPVARDVVKGAAQKLHVAFAGSRIT CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECHHHHH QFVRDVAVTVIGNLSTAQKKLQTELSETAITYHEGPLVALGAPPRSPQRTEVGTRALEAL HHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCHHHHHHHHHHHH FADPRSGVTTALWPLIGGTAHTLLLFPDAQTPLTVEAATVGCGEALRILSIPPSSDPQGL HCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHH VRERYRIRKAGWVLIRPDQVVAARGDAGNLTGLANYLDRVVRPAQMALSA HHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-(3-hydroxyphenyl)propionate; NADH; O2 [C]
Specific reaction: 3-(3-hydroxyphenyl)propionate + NADH + O2 = H2O + 3-(2,3-dihydroxyphenyl)propionate + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]