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The map label for this gene is fliP [H]

Identifier: 158422252

GI number: 158422252

Start: 703520

End: 704398

Strand: Reverse

Name: fliP [H]

Synonym: AZC_0628

Alternate gene names: 158422252

Gene position: 704398-703520 (Counterclockwise)

Preceding gene: 158422253

Following gene: 158422251

Centisome position: 13.12

GC content: 63.94

Gene sequence:

>879_bases
ATGAGCCGCCCCGCTCCGAAGGGCCATCGCAACGTCTGGTCCCTGATCCGCCCCTGCCTGCTCGCTTTGCTCGGCCTGCT
GTTTTCGGCCGGTCTCGCCTACGCCCAGAACCGGGTGCAGGGTGATACCCAGATTCCGTCGCTCGACTCGCTGCTCGGGG
ACAATGGCGGCGCGGTGAGCGGTCGCATCATCCAGATGGTGATGGTGCTGACGGTGCTGTCGATCGCACCGGGCCTGCTC
ATCATGGTGACGAGCTTCACCCGCTTCGTGATCGCCCTCTCCTTCCTGCGCTCCGGCCTCGGCCTTTCGAGCACGCCGGC
GAACCTCGTACTCATCAGCCTGTCCCTGTTCATGACCTTCTACGTCATGGGTCCGACCTTCGATAAGGCCTGGACCGAGG
GCGTGCGGCCGCTGACCGAGCGCAAGATCACCGAAGAGGAGGCCTTCACGAAGATCTCCGAACCGTTCCGGGAGTTCATG
CTCTCACAGGTACGCCCGAAGGACCTGCGCCTCTTCGCGGACATCGCGGCGGCCACCGGCCGGCCGTCGAAGAACGATCC
CGAGACGGCGGCCCAGAACAATTCGGCTCCGGCCACGAGCCCGAACCGGGACCAGAATGCCCAGCCCGAGCGGCAGATCG
AACTGCGGATCCTCATTCCCGCCTTCATGATCTCCGAACTGCGGCGCGGCTTCGAGATCGGCTTCCTCATCATCCTGCCG
TTCCTCATCATCGACATGATCGTGGCGACCCTCGTGATGTCCATGGGCATGATGATGATGTCGCCGGCGGCCCTCGCCCT
GCCGTTCAAGATCCTGTTCTTCGTCCTGATCGACGGCTGGAACATCCTCGTCAGCGGGCTCGTGCGCTCCTTCTTCTGA

Upstream 100 bases:

>100_bases
CGAGCGCGCTCCAGCAGCTGCGCGAGGACCTCAACGAGCGTGCCCGCGTCCGCAGCGAAGGGCGCGTGGACGAACTCATC
ATCGAGACGCTGGTGGTGCA

Downstream 100 bases:

>100_bases
GCTGCACGGCCCCCAAGATCCCCGGTCGGAGGCCCCGAAAGGCTCCGGCTGGGCGTCTGTGCAGCGGGGCCAGGTGTCGC
TCTGCCCGCGGCGGCACGGC

Product: flagellar biosynthetic FliP protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSRPAPKGHRNVWSLIRPCLLALLGLLFSAGLAYAQNRVQGDTQIPSLDSLLGDNGGAVSGRIIQMVMVLTVLSIAPGLL
IMVTSFTRFVIALSFLRSGLGLSSTPANLVLISLSLFMTFYVMGPTFDKAWTEGVRPLTERKITEEEAFTKISEPFREFM
LSQVRPKDLRLFADIAAATGRPSKNDPETAAQNNSAPATSPNRDQNAQPERQIELRILIPAFMISELRRGFEIGFLIILP
FLIIDMIVATLVMSMGMMMMSPAALALPFKILFFVLIDGWNILVSGLVRSFF

Sequences:

>Translated_292_residues
MSRPAPKGHRNVWSLIRPCLLALLGLLFSAGLAYAQNRVQGDTQIPSLDSLLGDNGGAVSGRIIQMVMVLTVLSIAPGLL
IMVTSFTRFVIALSFLRSGLGLSSTPANLVLISLSLFMTFYVMGPTFDKAWTEGVRPLTERKITEEEAFTKISEPFREFM
LSQVRPKDLRLFADIAAATGRPSKNDPETAAQNNSAPATSPNRDQNAQPERQIELRILIPAFMISELRRGFEIGFLIILP
FLIIDMIVATLVMSMGMMMMSPAALALPFKILFFVLIDGWNILVSGLVRSFF
>Mature_291_residues
SRPAPKGHRNVWSLIRPCLLALLGLLFSAGLAYAQNRVQGDTQIPSLDSLLGDNGGAVSGRIIQMVMVLTVLSIAPGLLI
MVTSFTRFVIALSFLRSGLGLSSTPANLVLISLSLFMTFYVMGPTFDKAWTEGVRPLTERKITEEEAFTKISEPFREFML
SQVRPKDLRLFADIAAATGRPSKNDPETAAQNNSAPATSPNRDQNAQPERQIELRILIPAFMISELRRGFEIGFLIILPF
LIIDMIVATLVMSMGMMMMSPAALALPFKILFFVLIDGWNILVSGLVRSFF

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=249, Percent_Identity=40.9638554216867, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 32155; Mature: 32023

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPAPKGHRNVWSLIRPCLLALLGLLFSAGLAYAQNRVQGDTQIPSLDSLLGDNGGAVS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHH
GRIIQMVMVLTVLSIAPGLLIMVTSFTRFVIALSFLRSGLGLSSTPANLVLISLSLFMTF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
YVMGPTFDKAWTEGVRPLTERKITEEEAFTKISEPFREFMLSQVRPKDLRLFADIAAATG
HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
RPSKNDPETAAQNNSAPATSPNRDQNAQPERQIELRILIPAFMISELRRGFEIGFLIILP
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIIDMIVATLVMSMGMMMMSPAALALPFKILFFVLIDGWNILVSGLVRSFF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SRPAPKGHRNVWSLIRPCLLALLGLLFSAGLAYAQNRVQGDTQIPSLDSLLGDNGGAVS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHH
GRIIQMVMVLTVLSIAPGLLIMVTSFTRFVIALSFLRSGLGLSSTPANLVLISLSLFMTF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
YVMGPTFDKAWTEGVRPLTERKITEEEAFTKISEPFREFMLSQVRPKDLRLFADIAAATG
HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
RPSKNDPETAAQNNSAPATSPNRDQNAQPERQIELRILIPAFMISELRRGFEIGFLIILP
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIIDMIVATLVMSMGMMMMSPAALALPFKILFFVLIDGWNILVSGLVRSFF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]