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The map label for this gene is hypC [H]

Identifier: 158422234

GI number: 158422234

Start: 676251

End: 676550

Strand: Direct

Name: hypC [H]

Synonym: AZC_0610

Alternate gene names: 158422234

Gene position: 676251-676550 (Clockwise)

Preceding gene: 158422233

Following gene: 158422235

Centisome position: 12.59

GC content: 67.33

Gene sequence:

>300_bases
ATGTGTCTCGGCATTCCCGGCCGGATCGTCGCCATCGCCGATGAAGACGCGATGCTCGCCGTCGTCGATGTGTCCGGCGT
CCGCCGCACCGTGGACGTGGTGTGCGTGGCGCAGGAGGGCGAACCCCTTGAGGCGCTCATCGGCGTCTGGGTGCTCGTCC
ATGTGGGCTTCGCCATGAGCCGCATCGACGAGGAGGAGGCCGCCGCCACGCTGAAGGTGCTGGCGGAGATCGGCGAGATG
GAAGGCGAATTGGATGCCATGCGCACCGGCTCCGTCGCACCCCTCGCTCCGGCTAATTGA

Upstream 100 bases:

>100_bases
CGCGGAAGAACTCGGCCTCTCCCGCGTCGGCCTCAGGGCCAAGCTCGACCGCTACGGCATCGCCCGCGACCGCACCTTCG
CCCGGCATTAGGAGGACCCC

Downstream 100 bases:

>100_bases
GGAGGCGAGCCCATGCGTTTCGTCGATGAATTCCGCGATCCGGCCCTCGCCGCCGCGCTGATCCGGGAAATCGGGACCAT
CTGCGCCACCCTCGGGCGCG

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MCLGIPGRIVAIADEDAMLAVVDVSGVRRTVDVVCVAQEGEPLEALIGVWVLVHVGFAMSRIDEEEAAATLKVLAEIGEM
EGELDAMRTGSVAPLAPAN

Sequences:

>Translated_99_residues
MCLGIPGRIVAIADEDAMLAVVDVSGVRRTVDVVCVAQEGEPLEALIGVWVLVHVGFAMSRIDEEEAAATLKVLAEIGEM
EGELDAMRTGSVAPLAPAN
>Mature_99_residues
MCLGIPGRIVAIADEDAMLAVVDVSGVRRTVDVVCVAQEGEPLEALIGVWVLVHVGFAMSRIDEEEAAATLKVLAEIGEM
EGELDAMRTGSVAPLAPAN

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

Organism=Escherichia coli, GI1789364, Length=77, Percent_Identity=49.3506493506493, Blast_Score=76, Evalue=4e-16,
Organism=Escherichia coli, GI1789083, Length=90, Percent_Identity=44.4444444444444, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10330; Mature: 10330

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLGIPGRIVAIADEDAMLAVVDVSGVRRTVDVVCVAQEGEPLEALIGVWVLVHVGFAMS
CCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RIDEEEAAATLKVLAEIGEMEGELDAMRTGSVAPLAPAN
HCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MCLGIPGRIVAIADEDAMLAVVDVSGVRRTVDVVCVAQEGEPLEALIGVWVLVHVGFAMS
CCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
RIDEEEAAATLKVLAEIGEMEGELDAMRTGSVAPLAPAN
HCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190 [H]