| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is tolA
Identifier: 158422147
GI number: 158422147
Start: 577721
End: 578746
Strand: Direct
Name: tolA
Synonym: AZC_0523
Alternate gene names: NA
Gene position: 577721-578746 (Clockwise)
Preceding gene: 158422146
Following gene: 158422148
Centisome position: 10.76
GC content: 69.4
Gene sequence:
>1026_bases ATGCGCGTCGGCCTCACCGCATCGAGCATTGCCCACGGGGCGGTGCTGGTTCTTGCCTTGGTGTCCTTCTCGGCACCGAG CGCCTTCGACACGCCCCAGCCCGACCCGATCAATGTGGACGTGATCTCCGCCTCCGACCTCTCGCAGATGACGAAGGGCA ACGAGAAGGGCAAGAAGACCGAGGTGAAGAAGGTCGTCGCCGAGAAGGTGGACGCGCCCAAGCCCGTCAACGATCCCAAT CTGAAGGTGTCGGAGAAGCAGGAGATCGAGCCCACCGCGCCGCCTCCGCCGCCCCCACCTCCGCCGCCCCCCACGCCCGC GCCGCCGCGCCCCGAGGAGCCGAAGCCTCCGACCCCTGCGCCGCAGCCCAAGCCCGACGAGCCCAAGCCCGCTCCCCCGA AGGCGGACAAGCCGCCGCCGGAGCAGAAGGCCGACGAGGGCCTGAAGGCGGACCCGAAGAAGGACGAGCAGAAGCAGGAG GCGAAGGCCCAGACGCCTCCGCCCTTGCCGCAGCGCAAGCCGCCTCCGCCGCCGACGCCCCAGCCGACGCGCGCGAACAA TGACGCCAAGACGCAGCAGGAGCAGAAGTTCGATGCGGACCGCATCGCGGCCCTGCTCGACAAGCGCACGCCCCAGCGCA ATGCAGCGGCCGACCAGCAGGTGTCGCAGACGGCTGCGCTCGGCTCGCCCAACGGCGCGGCCCAGACGCTGACCCAGAGC GAGATCGACGCGCTGCGCGCCCGCATCCAGTCGTGCTGGGGCCCGCCGGCCGGCGCCTCCGAGGCGAGCGACCTGCGCGC CACCATCGTCGTTTCCTTCAAGCAGGACGGATCGCTGGCCATGCAGCCGCAGTTGTCCGGCGTCACACCTGCATCTTCCC CCTATGGACCTGCCTTCGCCGACAGCGCCCTGCGCGCCATCATCCGCTGTGCGCCCTATACCTTCCTTCCGGCCAACAAA TATGCGGTCTGGAAGGAGATCGAGATGGGCTTCAGCCTGAAGGACATGCTCGGCCGGGCCCACTAA
Upstream 100 bases:
>100_bases ACGGCACGGTCATGCAGGTCATGGGCCGCCTGTCCGCCGCCGGCTTCAAGCGTGTGGCGCTGGTCACCGAAGGCGAACAG GGGAGCTGAGGCGAAGAGCG
Downstream 100 bases:
>100_bases TCGAAGAGACTGCCATGATCCATCTTCCGCGCCTGCTGACCGATCGCCTCGATCCACGCCTCTCGCGCCGGTCCGTCCTC GTCGGCGGCGCGGCGGCGGC
Product: TolA protein
Products: NA
Alternate protein names: LA TolA Protein; NB Protein; LA Outer Membrane Protein; Protein lA; Signal Peptide Protein
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRVGLTASSIAHGAVLVLALVSFSAPSAFDTPQPDPINVDVISASDLSQMTKGNEKGKKTEVKKVVAEKVDAPKPVNDPN LKVSEKQEIEPTAPPPPPPPPPPPTPAPPRPEEPKPPTPAPQPKPDEPKPAPPKADKPPPEQKADEGLKADPKKDEQKQE AKAQTPPPLPQRKPPPPPTPQPTRANNDAKTQQEQKFDADRIAALLDKRTPQRNAAADQQVSQTAALGSPNGAAQTLTQS EIDALRARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSPYGPAFADSALRAIIRCAPYTFLPANK YAVWKEIEMGFSLKDMLGRAH
Sequences:
>Translated_341_residues MRVGLTASSIAHGAVLVLALVSFSAPSAFDTPQPDPINVDVISASDLSQMTKGNEKGKKTEVKKVVAEKVDAPKPVNDPN LKVSEKQEIEPTAPPPPPPPPPPPTPAPPRPEEPKPPTPAPQPKPDEPKPAPPKADKPPPEQKADEGLKADPKKDEQKQE AKAQTPPPLPQRKPPPPPTPQPTRANNDAKTQQEQKFDADRIAALLDKRTPQRNAAADQQVSQTAALGSPNGAAQTLTQS EIDALRARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSPYGPAFADSALRAIIRCAPYTFLPANK YAVWKEIEMGFSLKDMLGRAH >Mature_341_residues MRVGLTASSIAHGAVLVLALVSFSAPSAFDTPQPDPINVDVISASDLSQMTKGNEKGKKTEVKKVVAEKVDAPKPVNDPN LKVSEKQEIEPTAPPPPPPPPPPPTPAPPRPEEPKPPTPAPQPKPDEPKPAPPKADKPPPEQKADEGLKADPKKDEQKQE AKAQTPPPLPQRKPPPPPTPQPTRANNDAKTQQEQKFDADRIAALLDKRTPQRNAAADQQVSQTAALGSPNGAAQTLTQS EIDALRARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSPYGPAFADSALRAIIRCAPYTFLPANK YAVWKEIEMGFSLKDMLGRAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36236; Mature: 36236
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGLTASSIAHGAVLVLALVSFSAPSAFDTPQPDPINVDVISASDLSQMTKGNEKGKKT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHH EVKKVVAEKVDAPKPVNDPNLKVSEKQEIEPTAPPPPPPPPPPPTPAPPRPEEPKPPTPA HHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQPKPDEPKPAPPKADKPPPEQKADEGLKADPKKDEQKQEAKAQTPPPLPQRKPPPPPTP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC QPTRANNDAKTQQEQKFDADRIAALLDKRTPQRNAAADQQVSQTAALGSPNGAAQTLTQS CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH EIDALRARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSPYGPAFA HHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHH DSALRAIIRCAPYTFLPANKYAVWKEIEMGFSLKDMLGRAH HHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure MRVGLTASSIAHGAVLVLALVSFSAPSAFDTPQPDPINVDVISASDLSQMTKGNEKGKKT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHH EVKKVVAEKVDAPKPVNDPNLKVSEKQEIEPTAPPPPPPPPPPPTPAPPRPEEPKPPTPA HHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQPKPDEPKPAPPKADKPPPEQKADEGLKADPKKDEQKQEAKAQTPPPLPQRKPPPPPTP CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC QPTRANNDAKTQQEQKFDADRIAALLDKRTPQRNAAADQQVSQTAALGSPNGAAQTLTQS CCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH EIDALRARIQSCWGPPAGASEASDLRATIVVSFKQDGSLAMQPQLSGVTPASSPYGPAFA HHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHH DSALRAIIRCAPYTFLPANKYAVWKEIEMGFSLKDMLGRAH HHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA