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The map label for this gene is tolR [H]

Identifier: 158422146

GI number: 158422146

Start: 577257

End: 577709

Strand: Direct

Name: tolR [H]

Synonym: AZC_0522

Alternate gene names: 158422146

Gene position: 577257-577709 (Clockwise)

Preceding gene: 158422145

Following gene: 158422147

Centisome position: 10.75

GC content: 65.78

Gene sequence:

>453_bases
ATGGGCATGGGCGGCGGCGCCGGAGGCGCATGGCAGAGCCGGCGGTCGCGCCGCCGGCGCAACGGCGGCATGATGGCCGA
GATCAACGTGACGCCCATGGTGGACGTCATGCTGGTGCTGCTCATCGTCTTCATGGTGGCCGCCCCGATGCTGACCGTGG
GCGTGCCCCTCGACCTGCCCAAGACGCAGGCCCAGGCCATGAACCAGGACAAGGACCCCCTCACCATCTCGGTGAACAAC
AAGGGTCAGGTGTTCCTGCAGGAAACCGAGATCAAGCTCGACGAACTGGTGCCCAAGCTGCAGGCCATCGCCAAGAACGG
CTATGACGAGCGCATCTTCGTGCGCGGCGACAAGACGGTGAATTACGGCACGGTCATGCAGGTCATGGGCCGCCTGTCCG
CCGCCGGCTTCAAGCGTGTGGCGCTGGTCACCGAAGGCGAACAGGGGAGCTGA

Upstream 100 bases:

>100_bases
GTTCGTCCATCAGGCGTCGCGGCAGGCACAGCGGCTCGAAGGCTTCGCCGACGAGTTCTCCGCCATCCTGTCGCGCCAGA
TCGACGAGCGGGGCTGAACC

Downstream 100 bases:

>100_bases
GGCGAAGAGCGATGCGCGTCGGCCTCACCGCATCGAGCATTGCCCACGGGGCGGTGCTGGTTCTTGCCTTGGTGTCCTTC
TCGGCACCGAGCGCCTTCGA

Product: biopolymer transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MGMGGGAGGAWQSRRSRRRRNGGMMAEINVTPMVDVMLVLLIVFMVAAPMLTVGVPLDLPKTQAQAMNQDKDPLTISVNN
KGQVFLQETEIKLDELVPKLQAIAKNGYDERIFVRGDKTVNYGTVMQVMGRLSAAGFKRVALVTEGEQGS

Sequences:

>Translated_150_residues
MGMGGGAGGAWQSRRSRRRRNGGMMAEINVTPMVDVMLVLLIVFMVAAPMLTVGVPLDLPKTQAQAMNQDKDPLTISVNN
KGQVFLQETEIKLDELVPKLQAIAKNGYDERIFVRGDKTVNYGTVMQVMGRLSAAGFKRVALVTEGEQGS
>Mature_149_residues
GMGGGAGGAWQSRRSRRRRNGGMMAEINVTPMVDVMLVLLIVFMVAAPMLTVGVPLDLPKTQAQAMNQDKDPLTISVNNK
GQVFLQETEIKLDELVPKLQAIAKNGYDERIFVRGDKTVNYGTVMQVMGRLSAAGFKRVALVTEGEQGS

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=125, Percent_Identity=40.8, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16296; Mature: 16165

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMGGGAGGAWQSRRSRRRRNGGMMAEINVTPMVDVMLVLLIVFMVAAPMLTVGVPLDLP
CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTQAQAMNQDKDPLTISVNNKGQVFLQETEIKLDELVPKLQAIAKNGYDERIFVRGDKTV
HHHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
NYGTVMQVMGRLSAAGFKRVALVTEGEQGS
CHHHHHHHHHHHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure 
GMGGGAGGAWQSRRSRRRRNGGMMAEINVTPMVDVMLVLLIVFMVAAPMLTVGVPLDLP
CCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTQAQAMNQDKDPLTISVNNKGQVFLQETEIKLDELVPKLQAIAKNGYDERIFVRGDKTV
HHHHHHCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
NYGTVMQVMGRLSAAGFKRVALVTEGEQGS
CHHHHHHHHHHHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]