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The map label for this gene is ygfA [C]

Identifier: 158422132

GI number: 158422132

Start: 565894

End: 566517

Strand: Direct

Name: ygfA [C]

Synonym: AZC_0508

Alternate gene names: 158422132

Gene position: 565894-566517 (Clockwise)

Preceding gene: 158422131

Following gene: 158422133

Centisome position: 10.54

GC content: 69.39

Gene sequence:

>624_bases
GTGACCCTTTCTTCTCCCACCACCTTCCGATCCGAGAAGGCCCGCCTGCGGGCCGAAGCGCTGCTGCGGCGCGCCGATAT
GGGCGCCGAACGTCGCGCCGCCGCTTCCGACGCGGCCGCGCGGCATGCGCTCATGGCGCTGGGATCGGTCGCCGGCCGCA
CGGTCGCCCTGTTCGCCCCCTTCCGCGACGAGATCGATACCGGCCCGCTGGCGCGCAAGCTGCGGGACGCGGGTGCCCGG
CTCGCCCTGCCGGTGGTGATAGGGCGCGACCGGCCGCTGATCTTCCGCCTGTGGGACGAAAACGACCTGCTGGAACCGGC
GGGGGCCTATGGCATTCCAACTCCGGGAGCGCAGGCGCCGCAGGTGACGCCCGACGATCTCATGGTGCCGCTCGCGGTCT
TCGACCGGGCGGGCGCGCGCATCGGTTACGGGGCCGGCTTTTACGACCGCACGCTTGCGCTGCTGCGGCGGGAAAAGCCG
ATCCGGGCCTTCGGTCTTGCGTTCGCCTGCCAGGAAACCGATCACGTTCCCGCTGAACCCCATGACGAACCGCTCGATGG
GATGGTAACGGAAGCCGGTGTCCTTTTCCTTGGCGGGTCTGATGCGGATTCTCTTTCTCGGTGA

Upstream 100 bases:

>100_bases
GGAGCTGTTCCTGACCTCGCCCCTGGGCTTGGACAAACGGCGCCCACCTACGTTGTAGGTTTCCCGGGATCGACCTCCGA
CGGCTTTTGCGGCTCCGCAC

Downstream 100 bases:

>100_bases
CGTGGTTGGCCGGACCGGCCGCGACGTGGTGACAAGCCGGTTGCCCGGTCTCGTTCAGGACTGGAAGCTCGATCTCGTCG
TGGTCAATGGCGAGAACGCC

Product: antifreeze protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTLSSPTTFRSEKARLRAEALLRRADMGAERRAAASDAAARHALMALGSVAGRTVALFAPFRDEIDTGPLARKLRDAGAR
LALPVVIGRDRPLIFRLWDENDLLEPAGAYGIPTPGAQAPQVTPDDLMVPLAVFDRAGARIGYGAGFYDRTLALLRREKP
IRAFGLAFACQETDHVPAEPHDEPLDGMVTEAGVLFLGGSDADSLSR

Sequences:

>Translated_207_residues
MTLSSPTTFRSEKARLRAEALLRRADMGAERRAAASDAAARHALMALGSVAGRTVALFAPFRDEIDTGPLARKLRDAGAR
LALPVVIGRDRPLIFRLWDENDLLEPAGAYGIPTPGAQAPQVTPDDLMVPLAVFDRAGARIGYGAGFYDRTLALLRREKP
IRAFGLAFACQETDHVPAEPHDEPLDGMVTEAGVLFLGGSDADSLSR
>Mature_206_residues
TLSSPTTFRSEKARLRAEALLRRADMGAERRAAASDAAARHALMALGSVAGRTVALFAPFRDEIDTGPLARKLRDAGARL
ALPVVIGRDRPLIFRLWDENDLLEPAGAYGIPTPGAQAPQVTPDDLMVPLAVFDRAGARIGYGAGFYDRTLALLRREKPI
RAFGLAFACQETDHVPAEPHDEPLDGMVTEAGVLFLGGSDADSLSR

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=33.1460674157303, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22220; Mature: 22088

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSSPTTFRSEKARLRAEALLRRADMGAERRAAASDAAARHALMALGSVAGRTVALFAP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
FRDEIDTGPLARKLRDAGARLALPVVIGRDRPLIFRLWDENDLLEPAGAYGIPTPGAQAP
CHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
QVTPDDLMVPLAVFDRAGARIGYGAGFYDRTLALLRREKPIRAFGLAFACQETDHVPAEP
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCC
HDEPLDGMVTEAGVLFLGGSDADSLSR
CCCCCCCCCCCCCEEEEECCCHHCCCC
>Mature Secondary Structure 
TLSSPTTFRSEKARLRAEALLRRADMGAERRAAASDAAARHALMALGSVAGRTVALFAP
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
FRDEIDTGPLARKLRDAGARLALPVVIGRDRPLIFRLWDENDLLEPAGAYGIPTPGAQAP
CHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
QVTPDDLMVPLAVFDRAGARIGYGAGFYDRTLALLRREKPIRAFGLAFACQETDHVPAEP
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHEECCCCCCCCCC
HDEPLDGMVTEAGVLFLGGSDADSLSR
CCCCCCCCCCCCCEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]