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The map label for this gene is groS [H]

Identifier: 158422049

GI number: 158422049

Start: 480434

End: 480721

Strand: Reverse

Name: groS [H]

Synonym: AZC_0425

Alternate gene names: 158422049

Gene position: 480721-480434 (Counterclockwise)

Preceding gene: 158422051

Following gene: 158422048

Centisome position: 8.95

GC content: 65.28

Gene sequence:

>288_bases
ATGTCCTTCCGTCCCCTGCATGACCGCGTGGTCGTCAAGCGCATCGAAGCCGAGCAGAAGACTGCCGGCGGCATCATCAT
CCCCGACACCGCCAAGGAAAAGCCCCAGGAGGGCGAGGTGGTCGCCGTGGGTCCGGGCGCCCGTGACGAGAACGGCAAGG
TCGTGGCCCTCGACGTGAAGGCCGGCGACCGCGTGCTGTTCGGCAAGTGGTCCGGCACCGAGGTCAAGATCGATGGCCAG
GACCTGCTGATCATGAAGGAAAGCGACATCCTCGGCGTGATCGGCTGA

Upstream 100 bases:

>100_bases
GAGTGGCCGACCTTATCTCCGGGCCGAGTTTGGCACTCCCATCCGGTGAGTGCCAGCAATGCGAGCGCGCCTCGCTTCAC
TGCCCGAGAGGATCAGGCCT

Downstream 100 bases:

>100_bases
TCCGCGCCCGCCTGTCCCTTCCTCCCGTTTCCCTTTCAGGAGAGCCAACATGGCTGCCAAAGAAGTCAAGTTCGCCGGCG
AAGCCCGCGAGAAGATGCTG

Product: chaperonin

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSFRPLHDRVVVKRIEAEQKTAGGIIIPDTAKEKPQEGEVVAVGPGARDENGKVVALDVKAGDRVLFGKWSGTEVKIDGQ
DLLIMKESDILGVIG

Sequences:

>Translated_95_residues
MSFRPLHDRVVVKRIEAEQKTAGGIIIPDTAKEKPQEGEVVAVGPGARDENGKVVALDVKAGDRVLFGKWSGTEVKIDGQ
DLLIMKESDILGVIG
>Mature_94_residues
SFRPLHDRVVVKRIEAEQKTAGGIIIPDTAKEKPQEGEVVAVGPGARDENGKVVALDVKAGDRVLFGKWSGTEVKIDGQD
LLIMKESDILGVIG

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Homo sapiens, GI4504523, Length=90, Percent_Identity=42.2222222222222, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=53.6842105263158, Blast_Score=95, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=48.3870967741936, Blast_Score=96, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324594, Length=95, Percent_Identity=43.1578947368421, Blast_Score=79, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356029, Length=90, Percent_Identity=45.5555555555556, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21358317, Length=90, Percent_Identity=44.4444444444444, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10194; Mature: 10063

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRPLHDRVVVKRIEAEQKTAGGIIIPDTAKEKPQEGEVVAVGPGARDENGKVVALDVK
CCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECC
AGDRVLFGKWSGTEVKIDGQDLLIMKESDILGVIG
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEECC
>Mature Secondary Structure 
SFRPLHDRVVVKRIEAEQKTAGGIIIPDTAKEKPQEGEVVAVGPGARDENGKVVALDVK
CCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEECC
AGDRVLFGKWSGTEVKIDGQDLLIMKESDILGVIG
CCCEEEEECCCCCEEEECCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA