| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158422032
Identifier: 158422032
GI number: 158422032
Start: 460275
End: 461219
Strand: Reverse
Name: 158422032
Synonym: AZC_0408
Alternate gene names: NA
Gene position: 461219-460275 (Counterclockwise)
Preceding gene: 158422037
Following gene: 158422031
Centisome position: 8.59
GC content: 67.62
Gene sequence:
>945_bases GTGTGCGGTGATTTCCCAAGGTCAGGTCCGTTGATGGGGATGGCGGCCATGCTTGGACGATGGGTGCGACAGCTCTGGCC CTTCCAGCCCCGCCCGGCGTCGGGCCCGCGCCATCCGGTCGCACCCTGCCACGTGCTGGGTCTTGCGGGTCTTGCGGCCC TGGCTCTCCTGGCCATGCCCTTTCTCCTCGCTGCGCCGGCGGCGGCGGAGCCGGAGAAATGCCCGCGCATGGTGGCCGGG CCGGTGCTGAAGCCCCGTGTCATCCCGGCGGCCTTCCGGCTCGCAGCGGCGGAGGGCGGGCAGGTGCGGTTCACCTTCGT CGGCCACGCCACCTTCCTGATCGAGAGCCCGCACGGCGTCACCATCGCAACCGACTATAACGACTACGTCCGCCCGAACA TCGTGCCGCAGATCGTCACCATGAACCGGGCGCACGATACCCACTACACGAACAACCCCGATCCCGGCATCGCGCACATC CTGCGCGGCTGGAACGACGACGGCACGCCGCCGCGCATCGAGCTCACCGTGGACGACGTGTGGATCCGCAACGTCTCCAC CAACATCCGGCAGGGCAGCGCGACGCGCTATGACGGCAATTCCATCTTCGTCTTCGAGGTGGCGGGCCTGTGCATCGCCC ATCTCGGCCATCTGCATCACATTCTAACGCCCGACCATCTGGAGGCGCTGGGCCGCATCGACGTGGTGCTGGCGCCAGTG GACGGCTCCTACACGCTCGACATCGAGGGCATGATGGAGAATCTGAAGGCCATCAACGCGCCGCTCGTCATCCCCATGCA CTATTTCAGCTCCTGGGGGCTGGACCGCTTCCTCTCGCGCCTCGGCAAGGAGTACCAGATCCAGCGCTCCGAAAGCCCCA GCGTCCTGCTCGCCCGCGAGACCCTGCCGCGCAAGCCGACCGTGCTCGTGCTGCCCGGCCGGTGA
Upstream 100 bases:
>100_bases TGGTTCCGTCCTTCTAGCCATCTCGCGCGTGCAATGCCACATCAACCTCACGCCGCTGTGATCATCCCTTGGACGGAGGC CGATTGCTGCGCAGCAGCAG
Downstream 100 bases:
>100_bases CGCAAAGCACCTCCGCATCCCGGCGAGACGCCTTGACCTGACACGCCGGAGCGCCTTTAAGCCCGAGCGCGCACGGCAAC GGCCCGCCGTGGCCCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Metal-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Protein; Zinc-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Zn-Dependent Hydrolase; Zn-Dependent Hydrolases Of Beta-Lactamase Fold; Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Family
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MCGDFPRSGPLMGMAAMLGRWVRQLWPFQPRPASGPRHPVAPCHVLGLAGLAALALLAMPFLLAAPAAAEPEKCPRMVAG PVLKPRVIPAAFRLAAAEGGQVRFTFVGHATFLIESPHGVTIATDYNDYVRPNIVPQIVTMNRAHDTHYTNNPDPGIAHI LRGWNDDGTPPRIELTVDDVWIRNVSTNIRQGSATRYDGNSIFVFEVAGLCIAHLGHLHHILTPDHLEALGRIDVVLAPV DGSYTLDIEGMMENLKAINAPLVIPMHYFSSWGLDRFLSRLGKEYQIQRSESPSVLLARETLPRKPTVLVLPGR
Sequences:
>Translated_314_residues MCGDFPRSGPLMGMAAMLGRWVRQLWPFQPRPASGPRHPVAPCHVLGLAGLAALALLAMPFLLAAPAAAEPEKCPRMVAG PVLKPRVIPAAFRLAAAEGGQVRFTFVGHATFLIESPHGVTIATDYNDYVRPNIVPQIVTMNRAHDTHYTNNPDPGIAHI LRGWNDDGTPPRIELTVDDVWIRNVSTNIRQGSATRYDGNSIFVFEVAGLCIAHLGHLHHILTPDHLEALGRIDVVLAPV DGSYTLDIEGMMENLKAINAPLVIPMHYFSSWGLDRFLSRLGKEYQIQRSESPSVLLARETLPRKPTVLVLPGR >Mature_314_residues MCGDFPRSGPLMGMAAMLGRWVRQLWPFQPRPASGPRHPVAPCHVLGLAGLAALALLAMPFLLAAPAAAEPEKCPRMVAG PVLKPRVIPAAFRLAAAEGGQVRFTFVGHATFLIESPHGVTIATDYNDYVRPNIVPQIVTMNRAHDTHYTNNPDPGIAHI LRGWNDDGTPPRIELTVDDVWIRNVSTNIRQGSATRYDGNSIFVFEVAGLCIAHLGHLHHILTPDHLEALGRIDVVLAPV DGSYTLDIEGMMENLKAINAPLVIPMHYFSSWGLDRFLSRLGKEYQIQRSESPSVLLARETLPRKPTVLVLPGR
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34405; Mature: 34405
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGDFPRSGPLMGMAAMLGRWVRQLWPFQPRPASGPRHPVAPCHVLGLAGLAALALLAMP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FLLAAPAAAEPEKCPRMVAGPVLKPRVIPAAFRLAAAEGGQVRFTFVGHATFLIESPHGV HHHHCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCE TIATDYNDYVRPNIVPQIVTMNRAHDTHYTNNPDPGIAHILRGWNDDGTPPRIELTVDDV EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCE WIRNVSTNIRQGSATRYDGNSIFVFEVAGLCIAHLGHLHHILTPDHLEALGRIDVVLAPV EEECCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEC DGSYTLDIEGMMENLKAINAPLVIPMHYFSSWGLDRFLSRLGKEYQIQRSESPSVLLARE CCCEEEEHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHCCCCEEEECCCCCCEEEEEC TLPRKPTVLVLPGR CCCCCCEEEEECCC >Mature Secondary Structure MCGDFPRSGPLMGMAAMLGRWVRQLWPFQPRPASGPRHPVAPCHVLGLAGLAALALLAMP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FLLAAPAAAEPEKCPRMVAGPVLKPRVIPAAFRLAAAEGGQVRFTFVGHATFLIESPHGV HHHHCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCE TIATDYNDYVRPNIVPQIVTMNRAHDTHYTNNPDPGIAHILRGWNDDGTPPRIELTVDDV EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCE WIRNVSTNIRQGSATRYDGNSIFVFEVAGLCIAHLGHLHHILTPDHLEALGRIDVVLAPV EEECCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEC DGSYTLDIEGMMENLKAINAPLVIPMHYFSSWGLDRFLSRLGKEYQIQRSESPSVLLARE CCCEEEEHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHCCCCEEEECCCCCCEEEEEC TLPRKPTVLVLPGR CCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA