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The map label for this gene is 158422000

Identifier: 158422000

GI number: 158422000

Start: 429293

End: 429892

Strand: Direct

Name: 158422000

Synonym: AZC_0376

Alternate gene names: NA

Gene position: 429293-429892 (Clockwise)

Preceding gene: 158421999

Following gene: 158422002

Centisome position: 7.99

GC content: 64.83

Gene sequence:

>600_bases
ATGGCCGCCTTGTCCTCCCGTACCAAGATCATCGCCCTGTTCTGCGCCTTCGCGGCAGGTGCGCTCGTGCTCGTGGCCGG
CGTGACGCTCCTGATGCCGGGGCGCGCCGGTCCCGCTTTGTCGTCGGCGGTGGGCGGCCCGTTCAAGCTCGTGGACGATG
GCGCCCAGCCGGTGACGGAGGCCGTCCTCAAGGGGAAGCCCTCGCTCGTCTTCTTCGGCTTCACTCACTGCCCTGACGTG
TGCCCGACGGCGCTGTTCGAGATGTCCGAGATCTTCCGCGCCCTTGGCCCCGATGCCGACAAGGCGCAGGCTTTCTTCAT
CACCGTGGACCCCGAGCGCGACACGCCCGAGATCATGAAGTCCTACGTGTCAAGCTTCGTGCCGCAGATCCACGGCCTCA
CCGGCACGCCGGAGCAGATCGAGGTGGTGAAGAAGGAATATCGCGTTTTCTCGCGCAAGGTGCCGCTGAAGGATGGCGAC
TACACCATGGATCACACGGCGGTGGTCTATCTCATGGACAAGGCGGGCAATTTCATCGCGCCCTTCAACACCAAGCGTCC
CCCTGCCGAGGCGGCGGCGGATCTCAAGCGCTATCTGTGA

Upstream 100 bases:

>100_bases
CGGCGTCGCAATCTTCTTCGATACGGTGGTCGCCGGCCTCGCGACGTGCTTTTGACGGTCCGACGCCTCCGCCTTCCTGC
CGCACGGATTTCTCCCGCCC

Downstream 100 bases:

>100_bases
GGATGCCGGCGGGCGCGCGGGCCGGGGCGCCGGCCGGTAGCGGCGCCTGTGGCCGCAGCCGCCCCAGCCCGTGCTCGGTC
TTGTCCCACCAGTACGGTCG

Product: inner mitochondrial membrane protein Sco1p precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAALSSRTKIIALFCAFAAGALVLVAGVTLLMPGRAGPALSSAVGGPFKLVDDGAQPVTEAVLKGKPSLVFFGFTHCPDV
CPTALFEMSEIFRALGPDADKAQAFFITVDPERDTPEIMKSYVSSFVPQIHGLTGTPEQIEVVKKEYRVFSRKVPLKDGD
YTMDHTAVVYLMDKAGNFIAPFNTKRPPAEAAADLKRYL

Sequences:

>Translated_199_residues
MAALSSRTKIIALFCAFAAGALVLVAGVTLLMPGRAGPALSSAVGGPFKLVDDGAQPVTEAVLKGKPSLVFFGFTHCPDV
CPTALFEMSEIFRALGPDADKAQAFFITVDPERDTPEIMKSYVSSFVPQIHGLTGTPEQIEVVKKEYRVFSRKVPLKDGD
YTMDHTAVVYLMDKAGNFIAPFNTKRPPAEAAADLKRYL
>Mature_198_residues
AALSSRTKIIALFCAFAAGALVLVAGVTLLMPGRAGPALSSAVGGPFKLVDDGAQPVTEAVLKGKPSLVFFGFTHCPDVC
PTALFEMSEIFRALGPDADKAQAFFITVDPERDTPEIMKSYVSSFVPQIHGLTGTPEQIEVVKKEYRVFSRKVPLKDGDY
TMDHTAVVYLMDKAGNFIAPFNTKRPPAEAAADLKRYL

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=163, Percent_Identity=36.8098159509202, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI281182722, Length=163, Percent_Identity=36.8098159509202, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI281182716, Length=163, Percent_Identity=36.8098159509202, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI153791313, Length=163, Percent_Identity=36.8098159509202, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI4759068, Length=162, Percent_Identity=37.6543209876543, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17531419, Length=163, Percent_Identity=34.3558282208589, Blast_Score=109, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6319498, Length=189, Percent_Identity=40.7407407407407, Blast_Score=130, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6319511, Length=140, Percent_Identity=42.1428571428571, Blast_Score=112, Evalue=6e-26,
Organism=Drosophila melanogaster, GI19920710, Length=168, Percent_Identity=40.4761904761905, Blast_Score=124, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 21429; Mature: 21298

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALSSRTKIIALFCAFAAGALVLVAGVTLLMPGRAGPALSSAVGGPFKLVDDGAQPVTE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCEEEECCCCHHHHH
AVLKGKPSLVFFGFTHCPDVCPTALFEMSEIFRALGPDADKAQAFFITVDPERDTPEIMK
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHH
SYVSSFVPQIHGLTGTPEQIEVVKKEYRVFSRKVPLKDGDYTMDHTAVVYLMDKAGNFIA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEC
PFNTKRPPAEAAADLKRYL
CCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AALSSRTKIIALFCAFAAGALVLVAGVTLLMPGRAGPALSSAVGGPFKLVDDGAQPVTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCEEEECCCCHHHHH
AVLKGKPSLVFFGFTHCPDVCPTALFEMSEIFRALGPDADKAQAFFITVDPERDTPEIMK
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHH
SYVSSFVPQIHGLTGTPEQIEVVKKEYRVFSRKVPLKDGDYTMDHTAVVYLMDKAGNFIA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEC
PFNTKRPPAEAAADLKRYL
CCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]