| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158421989
Identifier: 158421989
GI number: 158421989
Start: 417797
End: 418954
Strand: Direct
Name: 158421989
Synonym: AZC_0365
Alternate gene names: NA
Gene position: 417797-418954 (Clockwise)
Preceding gene: 158421984
Following gene: 158421990
Centisome position: 7.78
GC content: 60.62
Gene sequence:
>1158_bases ATGGCTCAGCACTTCCTTCTCTCACGCGCTGCCCGGACTATCAGTCTGGCGAAGGTCGCGCGTATGAGCGACGAGGAAGC CCACGACGCCTTCCGCAACATCCGTTGGGCGGCCACTGACGGCAAGCCGGTTTGCCCGCGTTGCGCCTGCGCCGAAACCC TCACCTACAAGACCCGCAAGCTCTATAAGTGCAAGGCTTGCGCGCATCAGTTCTCGGTCACGTTGGGCACCATCTTCGCC AGCCGCAAGCTGCCGATCCGCGACTACCTCCTTGCTATCGCCATCTTCGTCAACGGCGCCAAGGGCCATAGCGCCCTCCA GCTTTCCCGCGATCTCGACGTGCAGTACAAGACGGCTTTCGTCATGGCTCACAAGATCCGCGAAGCGCTTGCGGCGGAAA TGAAGGACATGACAGTTTCCGGCACGGTTGAGGTGGATGGCGCCTATTTCGGCGGCCACATTCGCCGAGAGAACCGCAAG GAAGACCGCAAGGACCGCCGCCTAGCCCAACACCAGACCGGCAAGCGCCGCGTTGTGGTCATCATGCGTGAGCGCGGCGG GCGGACGCTCCCCTTCGTGTTTAAGGCCGAAGCGCATGCAATCGAAACGATTGCCCAGCGCGTGGCGCCCGGCTCGATCA TCCATGCCGATGAAGCCGCCCATTGGGACAAACTGCACGCGCTATACCTGACCAAGCGCATCAACCATCAGGAGAGCTAT TCAGACGGCGAAGCCTGCACCAACGGGGCGGAAAGCTTCTTCTCCCGCATCCGCCGCGCTGAGATCGGCATTCACCACCA CATCAGCGGCCCGTACCTCGCTGCGTATTCCGCCGAAATGGCGTGGCGTGAGGATCATCGCCGGGTGAGCAATGGCGAGC CAGTACCTGATGACGGTCGGCTCCGCTCTGGCTCACCCGGTGAGCCGAGTGTGGAAGGGCTACTGGCAGCGGTGACTTTA GGCCGTTCTCGACCTTGGAGTGTGCGCCCTCACAATCTTGGCATCGCGAATTTCTTCCCCGACCCTTCGGGCGTTGACGT GAACCACTACGGGTTTTTGACTCCACTCCGCACGTTCAATTGCCTTTTGGTATTTGGCTCCGACCAATGGGTCTTCCAAG ATCGCAGTAAACCTATCTTCACCATCAACAGACTCTAG
Upstream 100 bases:
>100_bases CTTAAGCGCGAAATCATTTTTGGTCAACCCCAACGTTTTTCGTTGACGCCAACTCTTTACGCCATTATCACTGAGGTCAA CGCAAATCGTTGGCGCGGAA
Downstream 100 bases:
>100_bases GCGCACTTGAAAAGCCGAGGTCTGCTCTGTATCGACACCCCTGACATAAAACTGTTTTTTTATTACAATTTTAGACGACT TCGATCTGGTTGATCTGGTT
Product: transposase
Products: NA
Alternate protein names: ISSpo8 Transposase; ISSpo3 Transposase; ISXo2 Transposase; ISSod11 Transposase; ISXo5 Transposase; LOW QUALITY PROTEIN ISSpo3 Transposase; ISXo2 Transposase; ISSst2 Family IS; Conserved Transposase; Transposase-Like Protein; ISRssp2 Family IS; Unclassified Family Transposase; Transposase And Inactivated Derivative; ISH4 Transposase
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MAQHFLLSRAARTISLAKVARMSDEEAHDAFRNIRWAATDGKPVCPRCACAETLTYKTRKLYKCKACAHQFSVTLGTIFA SRKLPIRDYLLAIAIFVNGAKGHSALQLSRDLDVQYKTAFVMAHKIREALAAEMKDMTVSGTVEVDGAYFGGHIRRENRK EDRKDRRLAQHQTGKRRVVVIMRERGGRTLPFVFKAEAHAIETIAQRVAPGSIIHADEAAHWDKLHALYLTKRINHQESY SDGEACTNGAESFFSRIRRAEIGIHHHISGPYLAAYSAEMAWREDHRRVSNGEPVPDDGRLRSGSPGEPSVEGLLAAVTL GRSRPWSVRPHNLGIANFFPDPSGVDVNHYGFLTPLRTFNCLLVFGSDQWVFQDRSKPIFTINRL
Sequences:
>Translated_385_residues MAQHFLLSRAARTISLAKVARMSDEEAHDAFRNIRWAATDGKPVCPRCACAETLTYKTRKLYKCKACAHQFSVTLGTIFA SRKLPIRDYLLAIAIFVNGAKGHSALQLSRDLDVQYKTAFVMAHKIREALAAEMKDMTVSGTVEVDGAYFGGHIRRENRK EDRKDRRLAQHQTGKRRVVVIMRERGGRTLPFVFKAEAHAIETIAQRVAPGSIIHADEAAHWDKLHALYLTKRINHQESY SDGEACTNGAESFFSRIRRAEIGIHHHISGPYLAAYSAEMAWREDHRRVSNGEPVPDDGRLRSGSPGEPSVEGLLAAVTL GRSRPWSVRPHNLGIANFFPDPSGVDVNHYGFLTPLRTFNCLLVFGSDQWVFQDRSKPIFTINRL >Mature_384_residues AQHFLLSRAARTISLAKVARMSDEEAHDAFRNIRWAATDGKPVCPRCACAETLTYKTRKLYKCKACAHQFSVTLGTIFAS RKLPIRDYLLAIAIFVNGAKGHSALQLSRDLDVQYKTAFVMAHKIREALAAEMKDMTVSGTVEVDGAYFGGHIRRENRKE DRKDRRLAQHQTGKRRVVVIMRERGGRTLPFVFKAEAHAIETIAQRVAPGSIIHADEAAHWDKLHALYLTKRINHQESYS DGEACTNGAESFFSRIRRAEIGIHHHISGPYLAAYSAEMAWREDHRRVSNGEPVPDDGRLRSGSPGEPSVEGLLAAVTLG RSRPWSVRPHNLGIANFFPDPSGVDVNHYGFLTPLRTFNCLLVFGSDQWVFQDRSKPIFTINRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43245; Mature: 43114
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHFLLSRAARTISLAKVARMSDEEAHDAFRNIRWAATDGKPVCPRCACAETLTYKTRK CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHH LYKCKACAHQFSVTLGTIFASRKLPIRDYLLAIAIFVNGAKGHSALQLSRDLDVQYKTAF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHH VMAHKIREALAAEMKDMTVSGTVEVDGAYFGGHIRRENRKEDRKDRRLAQHQTGKRRVVV HHHHHHHHHHHHHHHCCEEECEEEECCEEECCEEECCCHHHHHHHHHHHHHCCCCCEEEE IMRERGGRTLPFVFKAEAHAIETIAQRVAPGSIIHADEAAHWDKLHALYLTKRINHQESY EEECCCCCCCCEEEECHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC SDGEACTNGAESFFSRIRRAEIGIHHHISGPYLAAYSAEMAWREDHRRVSNGEPVPDDGR CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCC LRSGSPGEPSVEGLLAAVTLGRSRPWSVRPHNLGIANFFPDPSGVDVNHYGFLTPLRTFN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEE CLLVFGSDQWVFQDRSKPIFTINRL EEEEECCCCEEEECCCCCEEEEECC >Mature Secondary Structure AQHFLLSRAARTISLAKVARMSDEEAHDAFRNIRWAATDGKPVCPRCACAETLTYKTRK CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHH LYKCKACAHQFSVTLGTIFASRKLPIRDYLLAIAIFVNGAKGHSALQLSRDLDVQYKTAF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHH VMAHKIREALAAEMKDMTVSGTVEVDGAYFGGHIRRENRKEDRKDRRLAQHQTGKRRVVV HHHHHHHHHHHHHHHCCEEECEEEECCEEECCEEECCCHHHHHHHHHHHHHCCCCCEEEE IMRERGGRTLPFVFKAEAHAIETIAQRVAPGSIIHADEAAHWDKLHALYLTKRINHQESY EEECCCCCCCCEEEECHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC SDGEACTNGAESFFSRIRRAEIGIHHHISGPYLAAYSAEMAWREDHRRVSNGEPVPDDGR CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCC LRSGSPGEPSVEGLLAAVTLGRSRPWSVRPHNLGIANFFPDPSGVDVNHYGFLTPLRTFN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEE CLLVFGSDQWVFQDRSKPIFTINRL EEEEECCCCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA