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The map label for this gene is phyR [H]

Identifier: 158421983

GI number: 158421983

Start: 411358

End: 412155

Strand: Reverse

Name: phyR [H]

Synonym: AZC_0359

Alternate gene names: 158421983

Gene position: 412155-411358 (Counterclockwise)

Preceding gene: 158421985

Following gene: 158421982

Centisome position: 7.68

GC content: 66.92

Gene sequence:

>798_bases
ATGCCACAGCAACAGCTCATCAAGCAGCTTCCGCTCCTCCGCCGTTATGCCCGTGCCCTTCTGGGCTCCCAGGAGGCGGG
TGACCGCCTCGTGCGCGACACGCTGCAGGCGGTGGTGGACGGACAGGTGTCCATCGACCCCAACGTCTCCCCCCGCGTGG
CCCTCTACCGCGCGCTGCACCAGATCTGGGAACCCCGCAGCACCCCGGACGTCGCCGTGGGCAGCCATGCCGACCAGCGC
CTCCAGTCGCTGAACGCGAGTTCGCGCGTGGCGCTCCTGCTCACCGCCATGGAAGGCTTCTCCTATGCCGAGGCGAGCGC
CATTCTGCGTGTCGGCCTCGAGGATGTGGAGCAGCAGGTGGTGGCGGCGCAGGCCGAGATCGACCGCCAGCTCGCCACCC
GCGTCCTCATCATCGAGGACGAATGGGTCATCGCGCTCGACCTGAAAACCCTCGTCACCGATCTCGGCCACGAAGTGGTG
GGCGTGGCGCCGACCCACACCAAGGCGCTGGAACTCGCCAAGGACGGCGATTTCGGTCTGGTGCTCGCGGACATCCAGCT
GGCGGACGGGTCCTCCGGCATCGATGCGGTCACCGACATCCTCGGCTCGTTCGACGTGCCGGTGATCTTCATCACCGCCT
TCCCGGATCGCCTTCTGACGGGCGAGCGGCCCGAGCCGACCTATCTGATCACCAAGCCGTTCCTCAGCGAGACGGTGAAG
GCCACGATCGCTCAGGCACTTTTCTTCCATCAGACGAAGTCCGACGCAGCGCAGGAACGCGCCCAGCGCATCGCCTGA

Upstream 100 bases:

>100_bases
GCTCGCTATAATGCCACGAGCCGCAACCTTGTTCCTCGGAACAGGGAACTTTCTCCCCAACGCTGCGTTGTTAGCGACTT
GTTCGAAGGCGATGCCCAGA

Downstream 100 bases:

>100_bases
CCGCGCGGTACCACGGCCGCGCGCAAGCTGGAACTTCGCCGCCGCGGGGACGTTCTGACCGGTGTGCCTCCAGAGCGGGG
CACACCCTCAGATCCAACGG

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPQQQLIKQLPLLRRYARALLGSQEAGDRLVRDTLQAVVDGQVSIDPNVSPRVALYRALHQIWEPRSTPDVAVGSHADQR
LQSLNASSRVALLLTAMEGFSYAEASAILRVGLEDVEQQVVAAQAEIDRQLATRVLIIEDEWVIALDLKTLVTDLGHEVV
GVAPTHTKALELAKDGDFGLVLADIQLADGSSGIDAVTDILGSFDVPVIFITAFPDRLLTGERPEPTYLITKPFLSETVK
ATIAQALFFHQTKSDAAQERAQRIA

Sequences:

>Translated_265_residues
MPQQQLIKQLPLLRRYARALLGSQEAGDRLVRDTLQAVVDGQVSIDPNVSPRVALYRALHQIWEPRSTPDVAVGSHADQR
LQSLNASSRVALLLTAMEGFSYAEASAILRVGLEDVEQQVVAAQAEIDRQLATRVLIIEDEWVIALDLKTLVTDLGHEVV
GVAPTHTKALELAKDGDFGLVLADIQLADGSSGIDAVTDILGSFDVPVIFITAFPDRLLTGERPEPTYLITKPFLSETVK
ATIAQALFFHQTKSDAAQERAQRIA
>Mature_264_residues
PQQQLIKQLPLLRRYARALLGSQEAGDRLVRDTLQAVVDGQVSIDPNVSPRVALYRALHQIWEPRSTPDVAVGSHADQRL
QSLNASSRVALLLTAMEGFSYAEASAILRVGLEDVEQQVVAAQAEIDRQLATRVLIIEDEWVIALDLKTLVTDLGHEVVG
VAPTHTKALELAKDGDFGLVLADIQLADGSSGIDAVTDILGSFDVPVIFITAFPDRLLTGERPEPTYLITKPFLSETVKA
TIAQALFFHQTKSDAAQERAQRIA

Specific function: Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However it is not known whether this regulation is direct or indirect. Also induces several de

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR014605
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28893; Mature: 28762

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQQQLIKQLPLLRRYARALLGSQEAGDRLVRDTLQAVVDGQVSIDPNVSPRVALYRALH
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
QIWEPRSTPDVAVGSHADQRLQSLNASSRVALLLTAMEGFSYAEASAILRVGLEDVEQQV
HHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VAAQAEIDRQLATRVLIIEDEWVIALDLKTLVTDLGHEVVGVAPTHTKALELAKDGDFGL
HHHHHHHHHHHHHEEEEEECCEEEEEEHHHHHHHHCCHHEECCCCCHHHHHHHCCCCCEE
VLADIQLADGSSGIDAVTDILGSFDVPVIFITAFPDRLLTGERPEPTYLITKPFLSETVK
EEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEEECHHHHHHHH
ATIAQALFFHQTKSDAAQERAQRIA
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQQQLIKQLPLLRRYARALLGSQEAGDRLVRDTLQAVVDGQVSIDPNVSPRVALYRALH
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
QIWEPRSTPDVAVGSHADQRLQSLNASSRVALLLTAMEGFSYAEASAILRVGLEDVEQQV
HHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VAAQAEIDRQLATRVLIIEDEWVIALDLKTLVTDLGHEVVGVAPTHTKALELAKDGDFGL
HHHHHHHHHHHHHEEEEEECCEEEEEEHHHHHHHHCCHHEECCCCCHHHHHHHCCCCCEE
VLADIQLADGSSGIDAVTDILGSFDVPVIFITAFPDRLLTGERPEPTYLITKPFLSETVK
EEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEEECHHHHHHHH
ATIAQALFFHQTKSDAAQERAQRIA
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA