| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is aceE [H]
Identifier: 158421951
GI number: 158421951
Start: 376702
End: 379092
Strand: Reverse
Name: aceE [H]
Synonym: AZC_0327
Alternate gene names: 158421951
Gene position: 379092-376702 (Counterclockwise)
Preceding gene: 158421953
Following gene: 158421950
Centisome position: 7.06
GC content: 69.22
Gene sequence:
>2391_bases GTGACCACGGCGCAAGAGCTGGAGATCCTCGCCGAACTGGAGCGCAAGGCGCTCTGGCTCGCCAGCTGGACCATCCACAA TGCCAACCACCTGCGCCCCTCCACGGATGGCCTCAAGGTGGGCGGGCATCAGGCGTCCTCCGCCTCGCTCGCCACGATCA TGACCGCGCTCTACTTCCACACCCTCCGGCCACAGGACCGGGTAGCGGTGAAGCCGCACGCGAGCCCCATCTTCCATGCC ATCCAGTATCTGCTCGGCGCCCAAACGCGCGAGAAGCTGGAGGCGTTCCGCGCCTATAAGGGCGCCCAGTCCTATCCCTC CCGCACCAAGGATACGGACGACGTGGACTTCTCCACCGGCTCCGTGGGCCTCGGGGTCGCGCAGACGCTGTTCGCCTCGC TGGCGCAGGATTATGTGCGCGCCCACGGCCTCACCGATCGGCCGGAGGGCCGCATGATCGCCCTCGTGGGCGATGCGGAA CTGGACGAGGGCAATGTGTTCGAGGCCCTGCTGGAGGGCTGGAAGCACGACGTGCGCAACACCTGGTGGATCGTCGATTA CAACCGCCAGAGCCTCGATGCCGTGGTGCGCGAGGGTCTGTACGAGCGCTTCATCGGCATCTTCGAGGCCATGGGCTGGC AGGTGGTCGTGCTCAAATACGGCTCGCTCCAGCAGGCCGCCTTCCGCGAGCCCGGCGGCGAGAAGCTGCGCCACTGGATC GACACCTGCCCGAACGGCGAATATTCCGCCCTCACCTTCCAGGGCGGCGCGGCGTGGCGCAAGCGCCTGATGGATGATCT GGGCGATCAGGGCGACGTGACCCGCCTCGTCGAGGCGCGCTCGGATGCCGAACTCTCCGCCCTGATGACCAATCTGGGCG GACACGACCTGCCGACCATCCTCGACGCCTTCGACGGCATCGACCACGACCGGCCGGTCTGCTTCCTCTGCTACACGGTG AAGGGCTTCGGCCTGCCGCTCGCCGGCCACAAGGACAATCACGCCGGCCTCATGACGCCGACGCAGATGGACACGCTGCG CGCCGCCATGAACATCCGCGCGGGCCATGAGTGGGACCGCTTCGAGGGGCTCACCCTGCCGCCCGCGACGCTGGAGCGTT TCCTGAAGGACGTGCCCTTCCGCCGCGAGGGCACCCGGCGCTATTCCGACGCTGCGCTGGCCGTCCCGTCCATCGCGCCG CCGCCCAATGCCTCGCTCTCCACGCAGGCCGGCTTCGGCCTCATCCTTCAGGATCTGGCGCGGGGCGACAGCGCGCTCGC GAGCCGCATCGTCACAACCTCGCCGGACGTGACCGTCTCCACCAATCTCGGCCCGTGGGTGAACCGGCGCGGCCTCTTCG CCCAGCGGGAGCTGGCGGACGTGTTCAAGCGCGAGCGCATCCCCTCCACCTTCAACTGGGAGTTCTCGCCGGACGGGCAG CACATGGAACTGGGCATCGCCGAGATGAACCTGTTCCTCATGCTCTCGGCCCTCGGCCTCTCCCACTCGCTGTTCGGTGC CCGGCTCATCCCCGTGGGCACGCTCTACGACCCCTTCATCTGCCGGGGTCTCGATGCCCTGAACTATGCCTGCTATCAGG ACGCCCGCTTCATCCTCGTGGCCACCCCGTCCGGCATCACGCTGGCGCCGGAGGGCGGAGCGCACCAGTCCATCGCCACC CCGCTCATCGGCATGTCGCAGGATGGGCTTGCCGCCTTCGAGCCGGCCTTCGTGGACGAACTGGCGGTGCTGGTGGAATT CGCCTTCGATTACGTGCAGCGTGACGGCGGCGGCCCGGACGAGGCCCGCAACTGGCTGCGGGACGAGACCGGCGGCTCGG TCTATTTCCGCCTCTCCACCCGCGCGCTGGAACAGCCCCGCCGCGCCTTCACGCAAACCCAGAAGCGGCACATGGTGGAC GGCGCCTATTGGCTGCGTGAGCCCGGACCCAACGCGGAGGTGGTGATCGCCGTGCAGGGCGCGCTGGCGCCGGAAGCCAT CGAGGCGGTGGGCCTGATCGCCGAGGACCGGCGGGACGTCGGCCTGCTCATGGTCACCTCCGCCGACCGGCTGAACGCCG GCTGGACCGCCGCGTCACGGGCGCGCGAGCAGGGCCATTACAGCGCCGAGAGCCATGTGGAGCGCCTGCTGGCGCCCCTG CCCCGCCATTGCGGGCTGGTGAGCGTGATCGACGGCCATCCCGCGACGCTCGGCTGGCTCGGCTCGGTGATGGGCCACCG GCAGCGGGCGCTGGGTGTCGAGCATTTCGGCCAGACCGGCAGCCTGCAGGATCTCTATCGCCACCATGGCGTCGATGCGG CTGCCATCGTCTCGGCCGCGCAGGCCATCGCGCCCGGCCGCCCCATGCGCCACCTCAGGGCGCTGGGCTGA
Upstream 100 bases:
>100_bases CGGAGGATAGATCGGCAAGAACCACCCGCTGGACGGCGCTATCCTCCCGGAACCGCCTCTCGCGCGGCACCAAGAAGCAG ACCATCCGGAGGACGACATC
Downstream 100 bases:
>100_bases GGAGCGCCCGCCATCGCCGCGAGGGCCGAGCCGAACAGGAGAGCCGAGCCCCCCCAGCGCCACGGCGGCGCTGCGGGAAA TCCCGAGCGGGGTGGCAAAG
Product: pyruvate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MTTAQELEILAELERKALWLASWTIHNANHLRPSTDGLKVGGHQASSASLATIMTALYFHTLRPQDRVAVKPHASPIFHA IQYLLGAQTREKLEAFRAYKGAQSYPSRTKDTDDVDFSTGSVGLGVAQTLFASLAQDYVRAHGLTDRPEGRMIALVGDAE LDEGNVFEALLEGWKHDVRNTWWIVDYNRQSLDAVVREGLYERFIGIFEAMGWQVVVLKYGSLQQAAFREPGGEKLRHWI DTCPNGEYSALTFQGGAAWRKRLMDDLGDQGDVTRLVEARSDAELSALMTNLGGHDLPTILDAFDGIDHDRPVCFLCYTV KGFGLPLAGHKDNHAGLMTPTQMDTLRAAMNIRAGHEWDRFEGLTLPPATLERFLKDVPFRREGTRRYSDAALAVPSIAP PPNASLSTQAGFGLILQDLARGDSALASRIVTTSPDVTVSTNLGPWVNRRGLFAQRELADVFKRERIPSTFNWEFSPDGQ HMELGIAEMNLFLMLSALGLSHSLFGARLIPVGTLYDPFICRGLDALNYACYQDARFILVATPSGITLAPEGGAHQSIAT PLIGMSQDGLAAFEPAFVDELAVLVEFAFDYVQRDGGGPDEARNWLRDETGGSVYFRLSTRALEQPRRAFTQTQKRHMVD GAYWLREPGPNAEVVIAVQGALAPEAIEAVGLIAEDRRDVGLLMVTSADRLNAGWTAASRAREQGHYSAESHVERLLAPL PRHCGLVSVIDGHPATLGWLGSVMGHRQRALGVEHFGQTGSLQDLYRHHGVDAAAIVSAAQAIAPGRPMRHLRALG
Sequences:
>Translated_796_residues MTTAQELEILAELERKALWLASWTIHNANHLRPSTDGLKVGGHQASSASLATIMTALYFHTLRPQDRVAVKPHASPIFHA IQYLLGAQTREKLEAFRAYKGAQSYPSRTKDTDDVDFSTGSVGLGVAQTLFASLAQDYVRAHGLTDRPEGRMIALVGDAE LDEGNVFEALLEGWKHDVRNTWWIVDYNRQSLDAVVREGLYERFIGIFEAMGWQVVVLKYGSLQQAAFREPGGEKLRHWI DTCPNGEYSALTFQGGAAWRKRLMDDLGDQGDVTRLVEARSDAELSALMTNLGGHDLPTILDAFDGIDHDRPVCFLCYTV KGFGLPLAGHKDNHAGLMTPTQMDTLRAAMNIRAGHEWDRFEGLTLPPATLERFLKDVPFRREGTRRYSDAALAVPSIAP PPNASLSTQAGFGLILQDLARGDSALASRIVTTSPDVTVSTNLGPWVNRRGLFAQRELADVFKRERIPSTFNWEFSPDGQ HMELGIAEMNLFLMLSALGLSHSLFGARLIPVGTLYDPFICRGLDALNYACYQDARFILVATPSGITLAPEGGAHQSIAT PLIGMSQDGLAAFEPAFVDELAVLVEFAFDYVQRDGGGPDEARNWLRDETGGSVYFRLSTRALEQPRRAFTQTQKRHMVD GAYWLREPGPNAEVVIAVQGALAPEAIEAVGLIAEDRRDVGLLMVTSADRLNAGWTAASRAREQGHYSAESHVERLLAPL PRHCGLVSVIDGHPATLGWLGSVMGHRQRALGVEHFGQTGSLQDLYRHHGVDAAAIVSAAQAIAPGRPMRHLRALG >Mature_795_residues TTAQELEILAELERKALWLASWTIHNANHLRPSTDGLKVGGHQASSASLATIMTALYFHTLRPQDRVAVKPHASPIFHAI QYLLGAQTREKLEAFRAYKGAQSYPSRTKDTDDVDFSTGSVGLGVAQTLFASLAQDYVRAHGLTDRPEGRMIALVGDAEL DEGNVFEALLEGWKHDVRNTWWIVDYNRQSLDAVVREGLYERFIGIFEAMGWQVVVLKYGSLQQAAFREPGGEKLRHWID TCPNGEYSALTFQGGAAWRKRLMDDLGDQGDVTRLVEARSDAELSALMTNLGGHDLPTILDAFDGIDHDRPVCFLCYTVK GFGLPLAGHKDNHAGLMTPTQMDTLRAAMNIRAGHEWDRFEGLTLPPATLERFLKDVPFRREGTRRYSDAALAVPSIAPP PNASLSTQAGFGLILQDLARGDSALASRIVTTSPDVTVSTNLGPWVNRRGLFAQRELADVFKRERIPSTFNWEFSPDGQH MELGIAEMNLFLMLSALGLSHSLFGARLIPVGTLYDPFICRGLDALNYACYQDARFILVATPSGITLAPEGGAHQSIATP LIGMSQDGLAAFEPAFVDELAVLVEFAFDYVQRDGGGPDEARNWLRDETGGSVYFRLSTRALEQPRRAFTQTQKRHMVDG AYWLREPGPNAEVVIAVQGALAPEAIEAVGLIAEDRRDVGLLMVTSADRLNAGWTAASRAREQGHYSAESHVERLLAPLP RHCGLVSVIDGHPATLGWLGSVMGHRQRALGVEHFGQTGSLQDLYRHHGVDAAAIVSAAQAIAPGRPMRHLRALG
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=829, Percent_Identity=25.0904704463209, Blast_Score=147, Evalue=2e-36,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 87291; Mature: 87160
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAQELEILAELERKALWLASWTIHNANHLRPSTDGLKVGGHQASSASLATIMTALYFH CCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH TLRPQDRVAVKPHASPIFHAIQYLLGAQTREKLEAFRAYKGAQSYPSRTKDTDDVDFSTG HCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SVGLGVAQTLFASLAQDYVRAHGLTDRPEGRMIALVGDAELDEGNVFEALLEGWKHDVRN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC TWWIVDYNRQSLDAVVREGLYERFIGIFEAMGWQVVVLKYGSLQQAAFREPGGEKLRHWI EEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCHHHHHHHH DTCPNGEYSALTFQGGAAWRKRLMDDLGDQGDVTRLVEARSDAELSALMTNLGGHDLPTI HCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHH LDAFDGIDHDRPVCFLCYTVKGFGLPLAGHKDNHAGLMTPTQMDTLRAAMNIRAGHEWDR HHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH FEGLTLPPATLERFLKDVPFRREGTRRYSDAALAVPSIAPPPNASLSTQAGFGLILQDLA CCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH RGDSALASRIVTTSPDVTVSTNLGPWVNRRGLFAQRELADVFKRERIPSTFNWEFSPDGQ CCHHHHHHHHEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC HMELGIAEMNLFLMLSALGLSHSLFGARLIPVGTLYDPFICRGLDALNYACYQDARFILV EEEEHHHHHHHHHHHHHHHCHHHHHCCEEEECCCHHCHHHHHCHHHHHHHHHCCCCEEEE ATPSGITLAPEGGAHQSIATPLIGMSQDGLAAFEPAFVDELAVLVEFAFDYVQRDGGGPD ECCCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EARNWLRDETGGSVYFRLSTRALEQPRRAFTQTQKRHMVDGAYWLREPGPNAEVVIAVQG HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCEEEEEEEC ALAPEAIEAVGLIAEDRRDVGLLMVTSADRLNAGWTAASRAREQGHYSAESHVERLLAPL CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC PRHCGLVSVIDGHPATLGWLGSVMGHRQRALGVEHFGQTGSLQDLYRHHGVDAAAIVSAA HHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHCCCCHHHHHHHH QAIAPGRPMRHLRALG HHHCCCCHHHHHHCCC >Mature Secondary Structure TTAQELEILAELERKALWLASWTIHNANHLRPSTDGLKVGGHQASSASLATIMTALYFH CCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHH TLRPQDRVAVKPHASPIFHAIQYLLGAQTREKLEAFRAYKGAQSYPSRTKDTDDVDFSTG HCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SVGLGVAQTLFASLAQDYVRAHGLTDRPEGRMIALVGDAELDEGNVFEALLEGWKHDVRN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC TWWIVDYNRQSLDAVVREGLYERFIGIFEAMGWQVVVLKYGSLQQAAFREPGGEKLRHWI EEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCHHHHHHHH DTCPNGEYSALTFQGGAAWRKRLMDDLGDQGDVTRLVEARSDAELSALMTNLGGHDLPTI HCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHH LDAFDGIDHDRPVCFLCYTVKGFGLPLAGHKDNHAGLMTPTQMDTLRAAMNIRAGHEWDR HHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH FEGLTLPPATLERFLKDVPFRREGTRRYSDAALAVPSIAPPPNASLSTQAGFGLILQDLA CCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHH RGDSALASRIVTTSPDVTVSTNLGPWVNRRGLFAQRELADVFKRERIPSTFNWEFSPDGQ CCHHHHHHHHEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC HMELGIAEMNLFLMLSALGLSHSLFGARLIPVGTLYDPFICRGLDALNYACYQDARFILV EEEEHHHHHHHHHHHHHHHCHHHHHCCEEEECCCHHCHHHHHCHHHHHHHHHCCCCEEEE ATPSGITLAPEGGAHQSIATPLIGMSQDGLAAFEPAFVDELAVLVEFAFDYVQRDGGGPD ECCCCCEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EARNWLRDETGGSVYFRLSTRALEQPRRAFTQTQKRHMVDGAYWLREPGPNAEVVIAVQG HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCEEEEEEEC ALAPEAIEAVGLIAEDRRDVGLLMVTSADRLNAGWTAASRAREQGHYSAESHVERLLAPL CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC PRHCGLVSVIDGHPATLGWLGSVMGHRQRALGVEHFGQTGSLQDLYRHHGVDAAAIVSAA HHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHCCCCHHHHHHHH QAIAPGRPMRHLRALG HHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]