BacMap

Definition	Azorhizobium caulinodans ORS 571, complete genome.
Accession	NC_009937
Length	5,369,772

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The map label for this gene is phbB [H]

Identifier: 158421929

GI number: 158421929

Start: 355098

End: 355820

Strand: Reverse

Name: phbB [H]

Synonym: AZC_0305

Alternate gene names: 158421929

Gene position: 355820-355098 (Counterclockwise)

Preceding gene: 158421930

Following gene: 158421928

Centisome position: 6.63

GC content: 64.87

Gene sequence:

>723_bases
ATGTCACGCGTTGCTTTGGTGACCGGGGGTACGCGCGGAATTGGCGAAGCCATTTCCATCGCGCTGAAGGACAAGGGCTA
CAAGGTGGCCGCCAATTACGCGGGCAATGACGCTGCCGCGCAGGCCTTCCACGAGAAGACCGGCATCCCGGTGTTCAAGT
GGGACGTCTCGGATTTCGAGGCCTGCAAGGCGGGCATCGCCAAGGTGGAGGCCGATGTCGGCCCCGTTGAAGTGCTCGTC
AACAATGCCGGCATCACCCGCGACGCCACGCTCCACCGCATGACGCTGGAGCAGTGGAACGCGGTGATCAACACCAACCT
GAACTCCGCCTTCAACATGTGCCGGAACGTGATCGAGGGGATGCGCGCCCGCAAGTTCGGCCGCATCGTCTGCATCTCGT
CCATCAACGGCCAGAAGGGCCAGTTCGGCCAGACCAACTACTCTGCCGCCAAGGCGGGCGAGATCGGCTTCGTGAAGGCG
CTGGCGCAGGAAAGCGCGGCGCTCGGCATCACGGTGAACGCCATCGCGCCCGGCTACATCGCCACCGAAATGGTGCGCGC
GGTGCCGGAGGACGTGCTCAAGAAGATCATCTCCACCATTCCCGTCGGCCGTCTCGGCGAGCCGGAGGACATCGCCCGGG
CCGTGGCCTTCCTGGTGGCGGACGATGCCGGCTTCATCACCGGCTCGACGCTGACCGCCAACGGCGCCCAGTACATCACC
TGA

Upstream 100 bases:

>100_bases
ACGTTACCCGTTTGCGAGAAGCCCGAAGATTGCCCGGCCTGTGCCGGACATGCGGTCTTGCGGCCGCCGGAAGGGCTCAT
TGAGGGAGAGGGAGGCAGAC

Downstream 100 bases:

>100_bases
CCGGACGTCCCACGCGTGCGTAGCCGCCCGGCCGGGACACCGTGCCGGGCGGTTTCGCATCCGGCCGCGATCAGCGCCGT
GCCATTGCCTTGCGATCGCC

Product: acetoacetyl-CoA reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSRVALVTGGTRGIGEAISIALKDKGYKVAANYAGNDAAAQAFHEKTGIPVFKWDVSDFEACKAGIAKVEADVGPVEVLV
NNAGITRDATLHRMTLEQWNAVINTNLNSAFNMCRNVIEGMRARKFGRIVCISSINGQKGQFGQTNYSAAKAGEIGFVKA
LAQESAALGITVNAIAPGYIATEMVRAVPEDVLKKIISTIPVGRLGEPEDIARAVAFLVADDAGFITGSTLTANGAQYIT

Sequences:

>Translated_240_residues
MSRVALVTGGTRGIGEAISIALKDKGYKVAANYAGNDAAAQAFHEKTGIPVFKWDVSDFEACKAGIAKVEADVGPVEVLV
NNAGITRDATLHRMTLEQWNAVINTNLNSAFNMCRNVIEGMRARKFGRIVCISSINGQKGQFGQTNYSAAKAGEIGFVKA
LAQESAALGITVNAIAPGYIATEMVRAVPEDVLKKIISTIPVGRLGEPEDIARAVAFLVADDAGFITGSTLTANGAQYIT
>Mature_239_residues
SRVALVTGGTRGIGEAISIALKDKGYKVAANYAGNDAAAQAFHEKTGIPVFKWDVSDFEACKAGIAKVEADVGPVEVLVN
NAGITRDATLHRMTLEQWNAVINTNLNSAFNMCRNVIEGMRARKFGRIVCISSINGQKGQFGQTNYSAAKAGEIGFVKAL
AQESAALGITVNAIAPGYIATEMVRAVPEDVLKKIISTIPVGRLGEPEDIARAVAFLVADDAGFITGSTLTANGAQYIT

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=39.0438247011952, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=38.2352941176471, Blast_Score=143, Evalue=1e-34,
Organism=Homo sapiens, GI4504505, Length=233, Percent_Identity=32.618025751073, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=32.3770491803279, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=30.9623430962343, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI4758504, Length=247, Percent_Identity=29.9595141700405, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=30.5555555555556, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI66933014, Length=240, Percent_Identity=27.9166666666667, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=28.7449392712551, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI109715829, Length=239, Percent_Identity=28.8702928870293, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=29.4605809128631, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI4503817, Length=181, Percent_Identity=29.8342541436464, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=30, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI83715985, Length=247, Percent_Identity=27.5303643724696, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI31542939, Length=241, Percent_Identity=28.2157676348548, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI4503301, Length=208, Percent_Identity=27.4038461538462, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI59889578, Length=188, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=46.4435146443515, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=35.5102040816327, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=31.7829457364341, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1790717, Length=241, Percent_Identity=30.2904564315353, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=30.0411522633745, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=27.6859504132231, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=28.2786885245902, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=30.2904564315353, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786812, Length=240, Percent_Identity=28.75, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=29.7071129707113, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=27.734375, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787820, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=25.609756097561, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=237, Percent_Identity=43.4599156118143, Blast_Score=165, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI25147288, Length=238, Percent_Identity=41.5966386554622, Blast_Score=163, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17568967, Length=231, Percent_Identity=30.3030303030303, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30.4, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.1204819277108, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17538182, Length=246, Percent_Identity=30.4878048780488, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=31.1740890688259, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=30.5439330543933, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=30.9160305343511, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=28.6821705426357, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=256, Percent_Identity=29.6875, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=27.734375, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=251, Percent_Identity=28.2868525896414, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=253, Percent_Identity=27.6679841897233, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=231, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=231, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=256, Percent_Identity=27.734375, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=28.515625, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=247, Percent_Identity=27.5303643724696, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=247, Percent_Identity=27.1255060728745, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=27.7992277992278, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=196, Percent_Identity=28.0612244897959, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=29.1187739463602, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=257, Percent_Identity=28.0155642023346, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=257, Percent_Identity=29.1828793774319, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=247, Percent_Identity=26.7206477732794, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=27.0676691729323, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=29.6875, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=239, Percent_Identity=22.5941422594142, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=253, Percent_Identity=26.8774703557312, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=256, Percent_Identity=25.78125, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=231, Percent_Identity=32.9004329004329, Blast_Score=109, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=27.9569892473118, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320089, Length=193, Percent_Identity=29.0155440414508, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=36.25, Blast_Score=131, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21355319, Length=241, Percent_Identity=34.0248962655602, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=31.5789473684211, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=32.1138211382114, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI18859837, Length=226, Percent_Identity=32.3008849557522, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=32.0158102766798, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28571526, Length=171, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=28.099173553719, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17737361, Length=231, Percent_Identity=32.034632034632, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24644337, Length=172, Percent_Identity=32.5581395348837, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI21355631, Length=167, Percent_Identity=29.940119760479, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007236, Length=239, Percent_Identity=29.2887029288703, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24649181, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581726, Length=137, Percent_Identity=31.3868613138686, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641232, Length=234, Percent_Identity=29.0598290598291, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011283
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.36 [H]

Molecular weight: Translated: 25264; Mature: 25133

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVALVTGGTRGIGEAISIALKDKGYKVAANYAGNDAAAQAFHEKTGIPVFKWDVSDFE
CCEEEEEECCCCCCCHHEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCHHH
ACKAGIAKVEADVGPVEVLVNNAGITRDATLHRMTLEQWNAVINTNLNSAFNMCRNVIEG
HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MRARKFGRIVCISSINGQKGQFGQTNYSAAKAGEIGFVKALAQESAALGITVNAIAPGYI
HHHHHCCCEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCCCCHH
ATEMVRAVPEDVLKKIISTIPVGRLGEPEDIARAVAFLVADDAGFITGSTLTANGAQYIT
HHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCC
>Mature Secondary Structure 
SRVALVTGGTRGIGEAISIALKDKGYKVAANYAGNDAAAQAFHEKTGIPVFKWDVSDFE
CEEEEEECCCCCCCHHEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCEEEEECCCHHH
ACKAGIAKVEADVGPVEVLVNNAGITRDATLHRMTLEQWNAVINTNLNSAFNMCRNVIEG
HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MRARKFGRIVCISSINGQKGQFGQTNYSAAKAGEIGFVKALAQESAALGITVNAIAPGYI
HHHHHCCCEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCEEEEEEECCCCCHH
ATEMVRAVPEDVLKKIISTIPVGRLGEPEDIARAVAFLVADDAGFITGSTLTANGAQYIT
HHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2546004; 3286259 [H]