| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gloB [H]
Identifier: 158421848
GI number: 158421848
Start: 267618
End: 268391
Strand: Reverse
Name: gloB [H]
Synonym: AZC_0224
Alternate gene names: 158421848
Gene position: 268391-267618 (Counterclockwise)
Preceding gene: 158421850
Following gene: 158421847
Centisome position: 5.0
GC content: 68.86
Gene sequence:
>774_bases ATGCCGCTGGATATCCGCGTCATCCCGTGCCTGAGCGACAATTACGCCGTCCTCCTGCACGATCCCCTCACCGAGGCGAC CGCCGTGGTGGACGCGCCCGAGCCCGGCCCGATCATGGATGCGCTGGAGCTGGAAGGCTGGGACCTCACCCATATCCTCA TCACCCATCACCATGCCGACCATGTGGACGGCGTGCTGGCGCTGAAGGCGCAGTATGGCGCCACCGTCGTCGGCCCGAAG GCCGAGGCCGCCACCATTCCGGCCCTGGATGTGGAGGTGGTGGATGCCGATCCCGTGGGTCTCGGCTCGGCCATCGGCCG GGTGATCGAGACCCCCGGCCACACGGCGGGCCACATCTCCTTCGTCTTCCCAGAAGAGAAGCTGCTGTTTGCCGGCGACA CGCTGTTCGTCATGGGCTGCGGCCGGGCGCTGGAATGCGACCCGCCGGTGCTGTGGCACTCGCTCCAGCGCCTGCGCACC CTGCCCGATGATTTCTCGCTCTATTGCGGGCACGAATACACGGTGGCCAACGGCCGGTTCGCGCTCAGCGTGGATCCCGA CAACGGCGCCCTGCGCGCCCGCGTCGCTGACGCCGAGGCGGCGCGGCGGGAGGGCAAGCCCACGATTCCGGCGCTGCTCG GCGACGAGCGTCTCACCAATCCCTTCCTGCGGGCGGACGATCCCGACATGGCCGAACGCCTCGGCCTTGCCGGCGCCGAT CCCGCTGCCGTCTTCACCGAACTGCGTGCCCGCAAGAATGTGTTCCGGGGCTGA
Upstream 100 bases:
>100_bases TGCGCCAGTTCCGCCATGTTCCGGTTGTCACGTGGAACGAGGTGGTTTGCGCGCGGCGGCGTGCTACTCAGGGACGCGCC GCAGCAGGAGGAGATGAAAC
Downstream 100 bases:
>100_bases ATGATGTCCGACCTCTCCCACCTGTCCGCCGCCGAAATCATCGCAAAACTGGATCTCAAGCCGCATCCGGAAGGCGGCCA TTATCGCGAGACCTTCCGCG
Product: glyoxalase II
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MPLDIRVIPCLSDNYAVLLHDPLTEATAVVDAPEPGPIMDALELEGWDLTHILITHHHADHVDGVLALKAQYGATVVGPK AEAATIPALDVEVVDADPVGLGSAIGRVIETPGHTAGHISFVFPEEKLLFAGDTLFVMGCGRALECDPPVLWHSLQRLRT LPDDFSLYCGHEYTVANGRFALSVDPDNGALRARVADAEAARREGKPTIPALLGDERLTNPFLRADDPDMAERLGLAGAD PAAVFTELRARKNVFRG
Sequences:
>Translated_257_residues MPLDIRVIPCLSDNYAVLLHDPLTEATAVVDAPEPGPIMDALELEGWDLTHILITHHHADHVDGVLALKAQYGATVVGPK AEAATIPALDVEVVDADPVGLGSAIGRVIETPGHTAGHISFVFPEEKLLFAGDTLFVMGCGRALECDPPVLWHSLQRLRT LPDDFSLYCGHEYTVANGRFALSVDPDNGALRARVADAEAARREGKPTIPALLGDERLTNPFLRADDPDMAERLGLAGAD PAAVFTELRARKNVFRG >Mature_256_residues PLDIRVIPCLSDNYAVLLHDPLTEATAVVDAPEPGPIMDALELEGWDLTHILITHHHADHVDGVLALKAQYGATVVGPKA EAATIPALDVEVVDADPVGLGSAIGRVIETPGHTAGHISFVFPEEKLLFAGDTLFVMGCGRALECDPPVLWHSLQRLRTL PDDFSLYCGHEYTVANGRFALSVDPDNGALRARVADAEAARREGKPTIPALLGDERLTNPFLRADDPDMAERLGLAGADP AAVFTELRARKNVFRG
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=261, Percent_Identity=35.632183908046, Blast_Score=154, Evalue=9e-38, Organism=Homo sapiens, GI94538322, Length=261, Percent_Identity=35.632183908046, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI14150041, Length=256, Percent_Identity=36.71875, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI21703352, Length=263, Percent_Identity=35.7414448669202, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI116642887, Length=263, Percent_Identity=35.7414448669202, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI46361987, Length=212, Percent_Identity=36.7924528301887, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI41327741, Length=172, Percent_Identity=29.0697674418605, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1786406, Length=255, Percent_Identity=34.1176470588235, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787158, Length=161, Percent_Identity=29.1925465838509, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536925, Length=255, Percent_Identity=30.5882352941176, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17538952, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320478, Length=257, Percent_Identity=28.7937743190661, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324614, Length=264, Percent_Identity=29.9242424242424, Blast_Score=79, Evalue=6e-16, Organism=Drosophila melanogaster, GI21356335, Length=262, Percent_Identity=34.3511450381679, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667711, Length=262, Percent_Identity=34.3511450381679, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24667703, Length=262, Percent_Identity=34.3511450381679, Blast_Score=158, Evalue=4e-39, Organism=Drosophila melanogaster, GI221330176, Length=167, Percent_Identity=30.5389221556886, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 27573; Mature: 27441
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDIRVIPCLSDNYAVLLHDPLTEATAVVDAPEPGPIMDALELEGWDLTHILITHHHAD CCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCHHEECCCCCEEEEEEEECCCC HVDGVLALKAQYGATVVGPKAEAATIPALDVEVVDADPVGLGSAIGRVIETPGHTAGHIS CCCCEEEEEECCCEEEECCCCCCEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE FVFPEEKLLFAGDTLFVMGCGRALECDPPVLWHSLQRLRTLPDDFSLYCGHEYTVANGRF EEECCCEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCEEEEECCEE ALSVDPDNGALRARVADAEAARREGKPTIPALLGDERLTNPFLRADDPDMAERLGLAGAD EEEECCCCCEEEEEECCHHHHHHCCCCCCCCEECCCHHCCCCCCCCCCCHHHHHCCCCCC PAAVFTELRARKNVFRG HHHHHHHHHHHHHHCCC >Mature Secondary Structure PLDIRVIPCLSDNYAVLLHDPLTEATAVVDAPEPGPIMDALELEGWDLTHILITHHHAD CCEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCHHEECCCCCEEEEEEEECCCC HVDGVLALKAQYGATVVGPKAEAATIPALDVEVVDADPVGLGSAIGRVIETPGHTAGHIS CCCCEEEEEECCCEEEECCCCCCEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE FVFPEEKLLFAGDTLFVMGCGRALECDPPVLWHSLQRLRTLPDDFSLYCGHEYTVANGRF EEECCCEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCEEEEECCEE ALSVDPDNGALRARVADAEAARREGKPTIPALLGDERLTNPFLRADDPDMAERLGLAGAD EEEECCCCCEEEEEECCHHHHHHCCCCCCCCEECCCHHCCCCCCCCCCCHHHHHCCCCCC PAAVFTELRARKNVFRG HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]